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The map label for this gene is rpmC

Identifier: 15835421

GI number: 15835421

Start: 944114

End: 944332

Strand: Reverse

Name: rpmC

Synonym: TC0807

Alternate gene names: 15835421

Gene position: 944332-944114 (Counterclockwise)

Preceding gene: 15835422

Following gene: 15835420

Centisome position: 88.01

GC content: 35.16

Gene sequence:

>219_bases
ATGGGAGCAAAAAAGAATTTATTAGCGGAGCTTAGAGAAAAAAGCTCAGAAGAGTTGGATGAGTTTATTCGTGATAATAA
AAAAGCTCTTTTCACTTTGCGTGCGGAAGCTGCTTTACAAAATAAAGCTGTAAAAACTCATCAGTTTTCTCTGTATAAGA
AAAGCATTGCTCGTGCTCTAACAATAAAACAAGAAAAAAAGGATAGAGTCCATGGCTAG

Upstream 100 bases:

>100_bases
GCAAACGTTTCGAAAGAAGATGCTCAGGACGCTTTAAGAAGAGCTGCTGCAAAGTTAGGAATCAGAACACGATTCGTTAA
ACGTGTGGAAAGGGTATAGT

Downstream 100 bases:

>100_bases
TGATGTGAGAGGCCGTAGAAAAACCAAAATTGGTGTAGTTGTTTCATCAAAGATGGAAAAAACTGTTGTCGTTCGAGTTG
AAAGAGTATACTCGCACCCT

Product: 50S ribosomal protein L29

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 72; Mature: 71

Protein sequence:

>72_residues
MGAKKNLLAELREKSSEELDEFIRDNKKALFTLRAEAALQNKAVKTHQFSLYKKSIARALTIKQEKKDRVHG

Sequences:

>Translated_72_residues
MGAKKNLLAELREKSSEELDEFIRDNKKALFTLRAEAALQNKAVKTHQFSLYKKSIARALTIKQEKKDRVHG
>Mature_71_residues
GAKKNLLAELREKSSEELDEFIRDNKKALFTLRAEAALQNKAVKTHQFSLYKKSIARALTIKQEKKDRVHG

Specific function: Unknown

COG id: COG0255

COG function: function code J; Ribosomal protein L29

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L29P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL29_CHLMU (Q9PJM2)

Other databases:

- EMBL:   AE002160
- PIR:   G81664
- RefSeq:   NP_297180.1
- ProteinModelPortal:   Q9PJM2
- SMR:   Q9PJM2
- GeneID:   1246174
- GenomeReviews:   AE002160_GR
- KEGG:   cmu:TC0807
- TIGR:   TC_0807
- HOGENOM:   HBG414103
- OMA:   DAFIHEN
- ProtClustDB:   PRK00306
- BioCyc:   CMUR243161:TC_0807-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00374_B
- InterPro:   IPR001854
- InterPro:   IPR018254
- Gene3D:   G3DSA:1.10.287.310
- TIGRFAMs:   TIGR00012

Pfam domain/function: PF00831 Ribosomal_L29; SSF46561 Ribosomal_L29

EC number: NA

Molecular weight: Translated: 8285; Mature: 8154

Theoretical pI: Translated: 10.68; Mature: 10.68

Prosite motif: PS00579 RIBOSOMAL_L29

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGAKKNLLAELREKSSEELDEFIRDNKKALFTLRAEAALQNKAVKTHQFSLYKKSIARAL
CCCHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TIKQEKKDRVHG
HHHHHHHCCCCC
>Mature Secondary Structure 
GAKKNLLAELREKSSEELDEFIRDNKKALFTLRAEAALQNKAVKTHQFSLYKKSIARAL
CCHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TIKQEKKDRVHG
HHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10684935