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The map label for this gene is rplX

Identifier: 15835418

GI number: 15835418

Start: 943137

End: 943472

Strand: Reverse

Name: rplX

Synonym: TC0804

Alternate gene names: 15835418

Gene position: 943472-943137 (Counterclockwise)

Preceding gene: 15835419

Following gene: 15835417

Centisome position: 87.93

GC content: 39.58

Gene sequence:

>336_bases
ATGAAGAGACGTAGTGTTTGTGTCGGTGACACTGTTTATGTGCTTGCTGGAAACGACAAAGGTAAGCAAGGAAAAGTTTT
ACGTTGTTTGAAGGATAAGGTTGTCGTTGAAGGAATCAATGTCCGAGTAAAAAATATTAAACGCTCTCAAGAAAATCCTA
AAGGGAAGCGTATTAATATTGAGGCTCCTCTCCATATTTCCAACGTACGTTTAAGTATCGATAATCAGCCTGCTAGACTG
TTTGTCAAAGTTACGGAGAAAGGACGGGAGCTTTGGAATAAGCATTCTGATGGCAGTTCTTCATTATACCGATTGGTAAG
AGAGAGAAAGGGTTAA

Upstream 100 bases:

>100_bases
GGGAACTCGAATTTTTGGGCCTGTAGCGCGAGAAATTCGAGATCGAGGCTTCATTAAAATTAGCTCTCTGGCTCCTGAGG
TGATTTAAAGGTAAGATAGT

Downstream 100 bases:

>100_bases
TATGAGCAGGTTAAAAAAACTATATACTGAAGAGATCAGAAAAACTCTTCAAGATAAGTTTCAATATGAAAATGTTATGC
AGATTCCTGTTCTTAAGAAA

Product: 50S ribosomal protein L24

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 111; Mature: 111

Protein sequence:

>111_residues
MKRRSVCVGDTVYVLAGNDKGKQGKVLRCLKDKVVVEGINVRVKNIKRSQENPKGKRINIEAPLHISNVRLSIDNQPARL
FVKVTEKGRELWNKHSDGSSSLYRLVRERKG

Sequences:

>Translated_111_residues
MKRRSVCVGDTVYVLAGNDKGKQGKVLRCLKDKVVVEGINVRVKNIKRSQENPKGKRINIEAPLHISNVRLSIDNQPARL
FVKVTEKGRELWNKHSDGSSSLYRLVRERKG
>Mature_111_residues
MKRRSVCVGDTVYVLAGNDKGKQGKVLRCLKDKVVVEGINVRVKNIKRSQENPKGKRINIEAPLHISNVRLSIDNQPARL
FVKVTEKGRELWNKHSDGSSSLYRLVRERKG

Specific function: One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit

COG id: COG0198

COG function: function code J; Ribosomal protein L24

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L24P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL24_CHLMU (Q9PJM5)

Other databases:

- EMBL:   AE002160
- PIR:   D81664
- RefSeq:   NP_297177.1
- ProteinModelPortal:   Q9PJM5
- SMR:   Q9PJM5
- GeneID:   1246171
- GenomeReviews:   AE002160_GR
- KEGG:   cmu:TC0804
- TIGR:   TC_0804
- HOGENOM:   HBG588578
- OMA:   RTKNIKR
- ProtClustDB:   PRK00004
- BioCyc:   CMUR243161:TC_0804-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_01326_B
- InterPro:   IPR005824
- InterPro:   IPR003256
- InterPro:   IPR005825
- InterPro:   IPR014723
- InterPro:   IPR008991
- Gene3D:   G3DSA:2.30.30.200
- PANTHER:   PTHR12903
- SMART:   SM00739
- TIGRFAMs:   TIGR01079

Pfam domain/function: PF00467 KOW; SSF50104 Transl_SH3_like

EC number: NA

Molecular weight: Translated: 12608; Mature: 12608

Theoretical pI: Translated: 11.15; Mature: 11.15

Prosite motif: PS01108 RIBOSOMAL_L24

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRRSVCVGDTVYVLAGNDKGKQGKVLRCLKDKVVVEGINVRVKNIKRSQENPKGKRINI
CCCCCEEECCEEEEEECCCCCCCCHHHHHHHHHEEEECCCEEEEECCCCCCCCCCCEEEE
EAPLHISNVRLSIDNQPARLFVKVTEKGRELWNKHSDGSSSLYRLVRERKG
ECCEEEEEEEEEECCCCEEEEEEEEHHHHHHHHCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MKRRSVCVGDTVYVLAGNDKGKQGKVLRCLKDKVVVEGINVRVKNIKRSQENPKGKRINI
CCCCCEEECCEEEEEECCCCCCCCHHHHHHHHHEEEECCCEEEEECCCCCCCCCCCEEEE
EAPLHISNVRLSIDNQPARLFVKVTEKGRELWNKHSDGSSSLYRLVRERKG
ECCEEEEEEEEEECCCCEEEEEEEEHHHHHHHHCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10684935