| Definition | Chlamydia muridarum Nigg, complete genome. |
|---|---|
| Accession | NC_002620 |
| Length | 1,072,950 |
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Identifier: 15835381
GI number: 15835381
Start: 910620
End: 911351
Strand: Reverse
Name: Not Available
Synonym: TC0767
Alternate gene names: 15835381
Gene position: 911351-910620 (Counterclockwise)
Preceding gene: 15835382
Following gene: 15835380
Centisome position: 84.94
GC content: 38.11
Gene sequence:
>732_bases ATGCTCCGCGTCTTAGCCTATCGACAGGTTGCTTTTTCTAAGTTTCCTTATGCCCTCAGATCGTTTTTAGATTTTTTGCA CTCTCTCAAGCAGCATTATTCGTTTATTCTGCCCGGAGATCCTCTCCCTAATAGGAAAGCAATCATACTGACATTCGATT ATGCTTCTGTTGATTTTTACAAGCATGTCTTTCCTTTTCTTCAGAAATTCCAGATTCCTGCGGTTGTTGGAGTTGCTTGG AGATACGTATCCCGTTTAGAAAGTGAAAATCTTCCCATTGATATGCGAATTTCGCCATCGGATTTTCTAGCTTTTCAAGA CGAAATATTTTCTTATTATCAGCCCTTTTGTTCGGTTAAAGAACTTTGTCATATGGCTCAAAGTTCGATTATTCGATTTG CCTCTTCAGGGTTTGCTATTAGAAACCTTAAAAACTCCCCTCCTTATTTACATACTGAAATTTCATTGTCTAAAATTTTA CTAGAAGAGGCTATACAGGCTCCTGTGGAAGTCTTTTTTTATCCTTTTGGAAAAAGTGATTTGGTGAGTCAACATTTTGT TCAGGAGGTTTACCGCTATTCTTTTGTGTTAGGGGATGCTGCGAGTTTTTTTTACTCGATGCAATCACAGCATAGCATTC CTCGTATTGATATGGCTTTAGATAGTCGAGGGATCCCATCTCTTTATCAGCTCTCTTTCCGCCAATTAAAACGATTCCTT ATTTTGCATTAA
Upstream 100 bases:
>100_bases CAGAGCTTACTCCTGAGGGAAAAGAGCGTAATCTAACGATCATTTCCGGACAGGTAGTCATTTATCCAGAGGACCCTTTT GCAATTCCTTCAGTTGATCC
Downstream 100 bases:
>100_bases TCAGGATCCTTTCTAATCCGCAACTAACTAGAAGCCATCCTTTTCCTTGCCTATATTTTCAAATTTTCTTAAAGTTTGGC CAAGCTTATATGGCTTAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: Xylanase/Chitin Deacetilase
Number of amino acids: Translated: 243; Mature: 243
Protein sequence:
>243_residues MLRVLAYRQVAFSKFPYALRSFLDFLHSLKQHYSFILPGDPLPNRKAIILTFDYASVDFYKHVFPFLQKFQIPAVVGVAW RYVSRLESENLPIDMRISPSDFLAFQDEIFSYYQPFCSVKELCHMAQSSIIRFASSGFAIRNLKNSPPYLHTEISLSKIL LEEAIQAPVEVFFYPFGKSDLVSQHFVQEVYRYSFVLGDAASFFYSMQSQHSIPRIDMALDSRGIPSLYQLSFRQLKRFL ILH
Sequences:
>Translated_243_residues MLRVLAYRQVAFSKFPYALRSFLDFLHSLKQHYSFILPGDPLPNRKAIILTFDYASVDFYKHVFPFLQKFQIPAVVGVAW RYVSRLESENLPIDMRISPSDFLAFQDEIFSYYQPFCSVKELCHMAQSSIIRFASSGFAIRNLKNSPPYLHTEISLSKIL LEEAIQAPVEVFFYPFGKSDLVSQHFVQEVYRYSFVLGDAASFFYSMQSQHSIPRIDMALDSRGIPSLYQLSFRQLKRFL ILH >Mature_243_residues MLRVLAYRQVAFSKFPYALRSFLDFLHSLKQHYSFILPGDPLPNRKAIILTFDYASVDFYKHVFPFLQKFQIPAVVGVAW RYVSRLESENLPIDMRISPSDFLAFQDEIFSYYQPFCSVKELCHMAQSSIIRFASSGFAIRNLKNSPPYLHTEISLSKIL LEEAIQAPVEVFFYPFGKSDLVSQHFVQEVYRYSFVLGDAASFFYSMQSQHSIPRIDMALDSRGIPSLYQLSFRQLKRFL ILH
Specific function: Unknown
COG id: COG0726
COG function: function code G; Predicted xylanase/chitin deacetylase
Gene ontology:
Cell location: Attached To The Membrane By A Lipid Anchor [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28317; Mature: 28317
Theoretical pI: Translated: 9.14; Mature: 9.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRVLAYRQVAFSKFPYALRSFLDFLHSLKQHYSFILPGDPLPNRKAIILTFDYASVDFY CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCEEEECCCCCCCCCEEEEEEECHHHHHH KHVFPFLQKFQIPAVVGVAWRYVSRLESENLPIDMRISPSDFLAFQDEIFSYYQPFCSVK HHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHH ELCHMAQSSIIRFASSGFAIRNLKNSPPYLHTEISLSKILLEEAIQAPVEVFFYPFGKSD HHHHHHHHHHHHHHHCCCEEECCCCCCCEEEEHHHHHHHHHHHHHHCCCEEEEECCCCHH LVSQHFVQEVYRYSFVLGDAASFFYSMQSQHSIPRIDMALDSRGIPSLYQLSFRQLKRFL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHH ILH HCC >Mature Secondary Structure MLRVLAYRQVAFSKFPYALRSFLDFLHSLKQHYSFILPGDPLPNRKAIILTFDYASVDFY CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCEEEECCCCCCCCCEEEEEEECHHHHHH KHVFPFLQKFQIPAVVGVAWRYVSRLESENLPIDMRISPSDFLAFQDEIFSYYQPFCSVK HHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHH ELCHMAQSSIIRFASSGFAIRNLKNSPPYLHTEISLSKILLEEAIQAPVEVFFYPFGKSD HHHHHHHHHHHHHHHCCCEEECCCCCCCEEEEHHHHHHHHHHHHHHCCCEEEEECCCCHH LVSQHFVQEVYRYSFVLGDAASFFYSMQSQHSIPRIDMALDSRGIPSLYQLSFRQLKRFL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHH ILH HCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA