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Identifier: 15835378

GI number: 15835378

Start: 906474

End: 907952

Strand: Reverse

Name: Not Available

Synonym: TC0764

Alternate gene names: 15835378

Gene position: 907952-906474 (Counterclockwise)

Preceding gene: 15835379

Following gene: 15835377

Centisome position: 84.62

GC content: 39.89

Gene sequence:

>1479_bases
ATGCTCCGCTATATCTTAAAACGGTTATGCCTGATTCCTTTGACTCTTTTTGCGATTATTTCTGTAAATTTTGTTATTCT
TAATGCTGCTCCAGGAGACCTTCTTGAGGAACATAGTGTGGATGCTCAAGGGGAAGCGGGTCGGTCGGATAAGATCCGTA
CATATAAAGGCCCAGATCGTTATTTACAGTTTAGAGAGCATTATGGGTTAACACTTCCTATCTTCTTTAATACTCGACCA
CAAATTTCTCGTGCGGAGCTACGTGCGGGAATTCAAGAGATTATCGATGGTACGATTCATAAAAAAAATAAAACAGGATG
TGTGACCAATGTCAAAGTATACTGGGGTGATTGCGCTAAGTTTATTATGCCAGCTTTACTAGCGGAAGCAGAGGATCCTT
CGCAAGCAGATAACTATCGTCATATTGCTGCGGACTTATTTATTCGGGGAGGAATTCGTCAGGGTATAGTTGGGGCACGC
CTGCTCGAGGAACAACGAGAATATAATCAGAAAGTGTCTAAGAGTAATGCGGAATTAGTTCGTTTGCTTAATGAAGATGA
TATTGAAGTGAAAGTTGCGGGGTTACGAGCGTGGGTTGAGAAAGAAGGTGGAAGGGATAAATTGATGCGTGGCGATCTTT
GGAGGATTTTTTTCCTAGAGACTCGTTTTGCAAAGTACCTTTCTCGGATTATTAGATTGGATTTTGGAACGCTACGTAAT
GATTGCCATAAAACAGTTGTTTCTGAAGTGATCAAACGTTTAGGGTCCTCTCTTGTTCTATCGCTACTTCCTATGATCGT
TGTTTTTGTACTATGCCAAGTATTTGGAATGATCATGGCAGTGAATAAAAATCGTTGGATAGATCATCTTCTTAATTTCC
TCTTTTTAATTTTATTCTCTATCCCAGTTTTTGTTGCCGTTCCTTGGATTATTGACAATTTTGTTTTGAACAAAACGGTT
CCTTTTACCTCTATTTCTATGCCGTATAGTGGACTATGTTCGTCTCCTGAAGTCTTTAAAGACATGACTTCATTAGAGAA
GCTTATAGATATTGTATTACACAGCTTCCTTCCTTTTTGTGCAGTCAGCTACGGAGCTTTTGCTGCGCAGTCTCGGCTCA
GTCGTGCAGTGTTTTTAGAAGTCTTAGGAGAAGATCATATTCCTGCACTGCGAGCACGAGGGATTTCTCAGTATGACATT
CTCATCCGACATGTTGGAAAAAACTCCGCAGCAACATTGATCACCTCCCTAGCTTCTTCTCTAAGTGCTTTGCTGGGAGG
AGCTTTAGTTGTGGAAACTTTGTTTGATATAGATGGTTTTGGAAAGTTTTTTTACCAGGCCATTCTAAATCGTGATCATA
ATGTAGTGATGTTTTCTGTTATCATGGGATCTGTTATTTCGCTTATCGGCTATTTAATAGGGGATATTTGTTATGTTCTT
CTTGATCCACGTGTTCAGTTAGAAGAAAGGAAGGTGTAA

Upstream 100 bases:

>100_bases
AAAATATTTTCATTCCAACAGAACATCCGGATTGGATTCCTGGGGCCCAGGATGAAACAGTGAATCTGTCGATGATGTGG
GTAGATAGAGAGGAGGGACA

Downstream 100 bases:

>100_bases
GATGCATGGACCGAAAACATCTTATCAGCGGTTTTCCCTTGCGTATAATAAGCGCACGCTCCCTTCTATAGCTCTGAAGT
TTTTTATTGGGCTGATGCTT

Product: peptide ABC transporter, permease protein, putative

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 492; Mature: 492

Protein sequence:

>492_residues
MLRYILKRLCLIPLTLFAIISVNFVILNAAPGDLLEEHSVDAQGEAGRSDKIRTYKGPDRYLQFREHYGLTLPIFFNTRP
QISRAELRAGIQEIIDGTIHKKNKTGCVTNVKVYWGDCAKFIMPALLAEAEDPSQADNYRHIAADLFIRGGIRQGIVGAR
LLEEQREYNQKVSKSNAELVRLLNEDDIEVKVAGLRAWVEKEGGRDKLMRGDLWRIFFLETRFAKYLSRIIRLDFGTLRN
DCHKTVVSEVIKRLGSSLVLSLLPMIVVFVLCQVFGMIMAVNKNRWIDHLLNFLFLILFSIPVFVAVPWIIDNFVLNKTV
PFTSISMPYSGLCSSPEVFKDMTSLEKLIDIVLHSFLPFCAVSYGAFAAQSRLSRAVFLEVLGEDHIPALRARGISQYDI
LIRHVGKNSAATLITSLASSLSALLGGALVVETLFDIDGFGKFFYQAILNRDHNVVMFSVIMGSVISLIGYLIGDICYVL
LDPRVQLEERKV

Sequences:

>Translated_492_residues
MLRYILKRLCLIPLTLFAIISVNFVILNAAPGDLLEEHSVDAQGEAGRSDKIRTYKGPDRYLQFREHYGLTLPIFFNTRP
QISRAELRAGIQEIIDGTIHKKNKTGCVTNVKVYWGDCAKFIMPALLAEAEDPSQADNYRHIAADLFIRGGIRQGIVGAR
LLEEQREYNQKVSKSNAELVRLLNEDDIEVKVAGLRAWVEKEGGRDKLMRGDLWRIFFLETRFAKYLSRIIRLDFGTLRN
DCHKTVVSEVIKRLGSSLVLSLLPMIVVFVLCQVFGMIMAVNKNRWIDHLLNFLFLILFSIPVFVAVPWIIDNFVLNKTV
PFTSISMPYSGLCSSPEVFKDMTSLEKLIDIVLHSFLPFCAVSYGAFAAQSRLSRAVFLEVLGEDHIPALRARGISQYDI
LIRHVGKNSAATLITSLASSLSALLGGALVVETLFDIDGFGKFFYQAILNRDHNVVMFSVIMGSVISLIGYLIGDICYVL
LDPRVQLEERKV
>Mature_492_residues
MLRYILKRLCLIPLTLFAIISVNFVILNAAPGDLLEEHSVDAQGEAGRSDKIRTYKGPDRYLQFREHYGLTLPIFFNTRP
QISRAELRAGIQEIIDGTIHKKNKTGCVTNVKVYWGDCAKFIMPALLAEAEDPSQADNYRHIAADLFIRGGIRQGIVGAR
LLEEQREYNQKVSKSNAELVRLLNEDDIEVKVAGLRAWVEKEGGRDKLMRGDLWRIFFLETRFAKYLSRIIRLDFGTLRN
DCHKTVVSEVIKRLGSSLVLSLLPMIVVFVLCQVFGMIMAVNKNRWIDHLLNFLFLILFSIPVFVAVPWIIDNFVLNKTV
PFTSISMPYSGLCSSPEVFKDMTSLEKLIDIVLHSFLPFCAVSYGAFAAQSRLSRAVFLEVLGEDHIPALRARGISQYDI
LIRHVGKNSAATLITSLASSLSALLGGALVVETLFDIDGFGKFFYQAILNRDHNVVMFSVIMGSVISLIGYLIGDICYVL
LDPRVQLEERKV

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane. Is expressed to facilitate adaptation to nutrient deficiency conditions [H]

COG id: COG0601

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788504, Length=275, Percent_Identity=27.6363636363636, Blast_Score=107, Evalue=2e-24,
Organism=Escherichia coli, GI1787053, Length=268, Percent_Identity=25.7462686567164, Blast_Score=97, Evalue=3e-21,
Organism=Escherichia coli, GI1789965, Length=282, Percent_Identity=25.531914893617, Blast_Score=96, Evalue=4e-21,
Organism=Escherichia coli, GI1789888, Length=272, Percent_Identity=24.6323529411765, Blast_Score=96, Evalue=7e-21,
Organism=Escherichia coli, GI1787550, Length=280, Percent_Identity=25, Blast_Score=86, Evalue=7e-18,
Organism=Escherichia coli, GI1787497, Length=266, Percent_Identity=23.6842105263158, Blast_Score=79, Evalue=5e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 55426; Mature: 55426

Theoretical pI: Translated: 8.53; Mature: 8.53

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRYILKRLCLIPLTLFAIISVNFVILNAAPGDLLEEHSVDAQGEAGRSDKIRTYKGPDR
CHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHCCCCCCCCCCCCCCCCCCCCHHH
YLQFREHYGLTLPIFFNTRPQISRAELRAGIQEIIDGTIHKKNKTGCVTNVKVYWGDCAK
HHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHCCHHCCCCCCCCEEEEEEEHHHHHH
FIMPALLAEAEDPSQADNYRHIAADLFIRGGIRQGIVGARLLEEQREYNQKVSKSNAELV
HHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
RLLNEDDIEVKVAGLRAWVEKEGGRDKLMRGDLWRIFFLETRFAKYLSRIIRLDFGTLRN
HHHCCCCCEEEEHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DCHKTVVSEVIKRLGSSLVLSLLPMIVVFVLCQVFGMIMAVNKNRWIDHLLNFLFLILFS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
IPVFVAVPWIIDNFVLNKTVPFTSISMPYSGLCSSPEVFKDMTSLEKLIDIVLHSFLPFC
HHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AVSYGAFAAQSRLSRAVFLEVLGEDHIPALRARGISQYDILIRHVGKNSAATLITSLASS
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHH
LSALLGGALVVETLFDIDGFGKFFYQAILNRDHNVVMFSVIMGSVISLIGYLIGDICYVL
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHH
LDPRVQLEERKV
HCCCCCHHCCCC
>Mature Secondary Structure
MLRYILKRLCLIPLTLFAIISVNFVILNAAPGDLLEEHSVDAQGEAGRSDKIRTYKGPDR
CHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHCCCCCCCCCCCCCCCCCCCCHHH
YLQFREHYGLTLPIFFNTRPQISRAELRAGIQEIIDGTIHKKNKTGCVTNVKVYWGDCAK
HHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHCCHHCCCCCCCCEEEEEEEHHHHHH
FIMPALLAEAEDPSQADNYRHIAADLFIRGGIRQGIVGARLLEEQREYNQKVSKSNAELV
HHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
RLLNEDDIEVKVAGLRAWVEKEGGRDKLMRGDLWRIFFLETRFAKYLSRIIRLDFGTLRN
HHHCCCCCEEEEHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DCHKTVVSEVIKRLGSSLVLSLLPMIVVFVLCQVFGMIMAVNKNRWIDHLLNFLFLILFS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
IPVFVAVPWIIDNFVLNKTVPFTSISMPYSGLCSSPEVFKDMTSLEKLIDIVLHSFLPFC
HHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AVSYGAFAAQSRLSRAVFLEVLGEDHIPALRARGISQYDILIRHVGKNSAATLITSLASS
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHH
LSALLGGALVVETLFDIDGFGKFFYQAILNRDHNVVMFSVIMGSVISLIGYLIGDICYVL
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHH
LDPRVQLEERKV
HCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1766370; 9384377 [H]