| Definition | Chlamydia muridarum Nigg, complete genome. |
|---|---|
| Accession | NC_002620 |
| Length | 1,072,950 |
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Identifier: 15835371
GI number: 15835371
Start: 898854
End: 899648
Strand: Direct
Name: Not Available
Synonym: TC0757
Alternate gene names: NA
Gene position: 898854-899648 (Clockwise)
Preceding gene: 15835369
Following gene: 15835372
Centisome position: 83.77
GC content: 40.75
Gene sequence:
>795_bases ATGCGCTGTTCTGCTTATTGCTCTGCTTCGTCCTATCATCTACACGTTCTTTTTCATCTTTTAAAGGCACGCTACCCTTC TGTCTTATCCCGAGAATACGTGCTCATTTCCTCTGAAGAGCTGAATGAAAGCGACAAAGCCGCTGTCTTTTTCCCATTTG GAGTTAGTGTGTTTTGGGGATGGGAAGAAGCTGAAGAACTTCAAGTGATCCAAGCTATCACCTCAGCATCAGTGGATCCT CTCCCTAACCCAGAAATTGATAGTTATGACTTCCATTATGGAGAGAAACTACAGATCCGTCGCGATAGACTTGTTCTCAC CAACTCTAATTTAAACACAAAACTTGCTATTTCCTTTGGGTTAGCCCAATCTATCAAACTTACCGTCTTTGAAGAAACGA TTTACAAAACAGTTGAAAACTCTAAATCTTTGCCTCAAGAACTTGCCTCTAAAGGGAAAATTTCTCTATCCCGTAAAACG ATCGCAAAAAAGATTGGAGAGCTTTTCCTGGATAAAGCTTCCGTAAACCTACACTCTGACATTCTCGATGAGCCCGACTT TTTCTGGGAACATCCAGAAACCCAACCTTTTTATATTGATGTGTTGACCTGCCTAGATGTAAACGCGCGAGTAAATGTAT TAAATCACAGACTTGCTATCCTAGGAGATGTTCTCGAGATTTTAAATGACCAACTTAATCATCAGCATTCTTCAGCTCTA GAGTGGACCGTGATCTGGTTAATTGCACTAGAGGTATTGGTCACCTTACTTAAAGACGTATTCAACATCATCTAA
Upstream 100 bases:
>100_bases TGAGCCTGAACGGAAAATCCTCCAGGCCTGCATCCCTTATTGTAAAGAAACTCTTGAATGTGAGACACTCTCCATTTCAA TGATATAGACGGATTCTTCC
Downstream 100 bases:
>100_bases AAAACTATGAAAACCTCTTGGATCAAGATTTTTTTTCAAGGGATGATTCACCTATACCGTTGGACTATTTCTCCTCTTCT GGGCTCCCCATGTCGGTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 264; Mature: 264
Protein sequence:
>264_residues MRCSAYCSASSYHLHVLFHLLKARYPSVLSREYVLISSEELNESDKAAVFFPFGVSVFWGWEEAEELQVIQAITSASVDP LPNPEIDSYDFHYGEKLQIRRDRLVLTNSNLNTKLAISFGLAQSIKLTVFEETIYKTVENSKSLPQELASKGKISLSRKT IAKKIGELFLDKASVNLHSDILDEPDFFWEHPETQPFYIDVLTCLDVNARVNVLNHRLAILGDVLEILNDQLNHQHSSAL EWTVIWLIALEVLVTLLKDVFNII
Sequences:
>Translated_264_residues MRCSAYCSASSYHLHVLFHLLKARYPSVLSREYVLISSEELNESDKAAVFFPFGVSVFWGWEEAEELQVIQAITSASVDP LPNPEIDSYDFHYGEKLQIRRDRLVLTNSNLNTKLAISFGLAQSIKLTVFEETIYKTVENSKSLPQELASKGKISLSRKT IAKKIGELFLDKASVNLHSDILDEPDFFWEHPETQPFYIDVLTCLDVNARVNVLNHRLAILGDVLEILNDQLNHQHSSAL EWTVIWLIALEVLVTLLKDVFNII >Mature_264_residues MRCSAYCSASSYHLHVLFHLLKARYPSVLSREYVLISSEELNESDKAAVFFPFGVSVFWGWEEAEELQVIQAITSASVDP LPNPEIDSYDFHYGEKLQIRRDRLVLTNSNLNTKLAISFGLAQSIKLTVFEETIYKTVENSKSLPQELASKGKISLSRKT IAKKIGELFLDKASVNLHSDILDEPDFFWEHPETQPFYIDVLTCLDVNARVNVLNHRLAILGDVLEILNDQLNHQHSSAL EWTVIWLIALEVLVTLLKDVFNII
Specific function: Unknown
COG id: COG1723
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI157388927, Length=282, Percent_Identity=27.6595744680851, Blast_Score=113, Evalue=2e-25, Organism=Caenorhabditis elegans, GI71996861, Length=220, Percent_Identity=25.9090909090909, Blast_Score=79, Evalue=3e-15, Organism=Saccharomyces cerevisiae, GI6320203, Length=298, Percent_Identity=33.5570469798658, Blast_Score=167, Evalue=1e-42, Organism=Saccharomyces cerevisiae, GI6321163, Length=228, Percent_Identity=31.5789473684211, Blast_Score=110, Evalue=3e-25, Organism=Saccharomyces cerevisiae, GI6320488, Length=281, Percent_Identity=26.6903914590747, Blast_Score=103, Evalue=3e-23, Organism=Drosophila melanogaster, GI18859701, Length=182, Percent_Identity=30.2197802197802, Blast_Score=98, Evalue=6e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30064; Mature: 30064
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRCSAYCSASSYHLHVLFHLLKARYPSVLSREYVLISSEELNESDKAAVFFPFGVSVFWG CCCCCCCCCCCHHHHHHHHHHHHHCHHHHCCCEEEEECHHCCCCCCEEEEEECCCEEEEC WEEAEELQVIQAITSASVDPLPNPEIDSYDFHYGEKLQIRRDRLVLTNSNLNTKLAISFG CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECEEEEECCCCCEEEEEEEC LAQSIKLTVFEETIYKTVENSKSLPQELASKGKISLSRKTIAKKIGELFLDKASVNLHSD CCCCEEEEEHHHHHHHHHHCCCCCHHHHHHCCCEEHHHHHHHHHHHHHHHHHCCCCHHHH ILDEPDFFWEHPETQPFYIDVLTCLDVNARVNVLNHRLAILGDVLEILNDQLNHQHSSAL HCCCCCCCCCCCCCCCEEEEEEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH EWTVIWLIALEVLVTLLKDVFNII HHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRCSAYCSASSYHLHVLFHLLKARYPSVLSREYVLISSEELNESDKAAVFFPFGVSVFWG CCCCCCCCCCCHHHHHHHHHHHHHCHHHHCCCEEEEECHHCCCCCCEEEEEECCCEEEEC WEEAEELQVIQAITSASVDPLPNPEIDSYDFHYGEKLQIRRDRLVLTNSNLNTKLAISFG CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECEEEEECCCCCEEEEEEEC LAQSIKLTVFEETIYKTVENSKSLPQELASKGKISLSRKTIAKKIGELFLDKASVNLHSD CCCCEEEEEHHHHHHHHHHCCCCCHHHHHHCCCEEHHHHHHHHHHHHHHHHHCCCCHHHH ILDEPDFFWEHPETQPFYIDVLTCLDVNARVNVLNHRLAILGDVLEILNDQLNHQHSSAL HCCCCCCCCCCCCCCCEEEEEEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH EWTVIWLIALEVLVTLLKDVFNII HHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA