| Definition | Chlamydia muridarum Nigg, complete genome. |
|---|---|
| Accession | NC_002620 |
| Length | 1,072,950 |
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Identifier: 15835285
GI number: 15835285
Start: 799533
End: 800540
Strand: Direct
Name: Not Available
Synonym: TC0670
Alternate gene names: NA
Gene position: 799533-800540 (Clockwise)
Preceding gene: 15835284
Following gene: 15835287
Centisome position: 74.52
GC content: 40.48
Gene sequence:
>1008_bases ATGCTTTTGCGAAAAATTTGCAGCTATCTTTTTTGTAGTTCCTTAGCCTGCTCCTTTATTTCCGTGATCGCAGTTTCCTT TCGTGCGGAACCAACAGCCCCTAGCATAGCTATATTTGCTTCATTCTCACATAACTCCCTTAGTGAATGTATCGATAGCT GTCAACAGGAGCTTGCTAGTTTTGGGAACATGCCCTCCATCTCATTATTCAATGCTGAAGATAATGTAGTCAAAGCAAGG AAAATTGCTCGAAACCTTCATAAAGATCCTAATATTGTCTCAATCATTACTCTAGGGCCTATCGCCACTAAAGTAATGAG CCAAATTGAAACACAAAAGCCTATTATTTACGCAGTAGTCCCAGATGGAGAAGCCCTTCGCTTTCCTAAAGAGCAGTCCA ATATATATGGGGTTAATGACAGTGTGGATACTAACCAATGCTGCTTTGCTATTCACGCAGTAACCAATAACGCTACTTCA TTGGTTTATTTGCAACCCCATGAACCTTTCCCCTCTTCCCTACAAGAAGAAATTACTACAAAGCTCCGAGCCTCAGGCAT TAAAGTTACAGGCCTGCCGATCTCTGCTTCAAATGTTTCTTCCCGCATTCAATTTATTTCGGAAAACCGGCCTTCTGCAG TCTTCTTTCCGCTATCTGCCTTATCAGAAAAAATGGGGACCTCGTTCATTCAAAGTATCTTAAAAGAAAATATCCCGCTC ATCACAAACGACTCTTCTCTTGTTACGAGGGGTGCCTGCGCAGCATGCAGCGTTGACTATAAATTATCTGGAAAGCAAAT AGCCTATATCGTTCGTTACTTACTTAGTAAAAAAAATAAAGAGGAGAACCTCAGCCAAATTAGTGCGGAGCCGATTCTTT CAAAAATCACTTTTAATGAAGAAATCATTCGATCTTTAGGTCTGCCTTTTAATATAGCTCCTGTCCACCAATTTGTATCA TTCCACTCATCAGATAATACAGGATTTCCTGCTATACAAACTCCCTAA
Upstream 100 bases:
>100_bases CTGGGTTTGTTCGCTTTTCCTCTCTTGGAAAGCGAGAAGACGTATTAGTAGCCTGTGAACGTTTACAAATGACTCCTGCT CTACAATAAATAGGAGTTCT
Downstream 100 bases:
>100_bases AACTTTCTACCGGGACCCCCTATCATCATCAGAAACAGATTCTGAATCCACGCTGTCATCTTGAGGCATAGAAAAAAGAG TATCTTCTCCTGATAACGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 335; Mature: 335
Protein sequence:
>335_residues MLLRKICSYLFCSSLACSFISVIAVSFRAEPTAPSIAIFASFSHNSLSECIDSCQQELASFGNMPSISLFNAEDNVVKAR KIARNLHKDPNIVSIITLGPIATKVMSQIETQKPIIYAVVPDGEALRFPKEQSNIYGVNDSVDTNQCCFAIHAVTNNATS LVYLQPHEPFPSSLQEEITTKLRASGIKVTGLPISASNVSSRIQFISENRPSAVFFPLSALSEKMGTSFIQSILKENIPL ITNDSSLVTRGACAACSVDYKLSGKQIAYIVRYLLSKKNKEENLSQISAEPILSKITFNEEIIRSLGLPFNIAPVHQFVS FHSSDNTGFPAIQTP
Sequences:
>Translated_335_residues MLLRKICSYLFCSSLACSFISVIAVSFRAEPTAPSIAIFASFSHNSLSECIDSCQQELASFGNMPSISLFNAEDNVVKAR KIARNLHKDPNIVSIITLGPIATKVMSQIETQKPIIYAVVPDGEALRFPKEQSNIYGVNDSVDTNQCCFAIHAVTNNATS LVYLQPHEPFPSSLQEEITTKLRASGIKVTGLPISASNVSSRIQFISENRPSAVFFPLSALSEKMGTSFIQSILKENIPL ITNDSSLVTRGACAACSVDYKLSGKQIAYIVRYLLSKKNKEENLSQISAEPILSKITFNEEIIRSLGLPFNIAPVHQFVS FHSSDNTGFPAIQTP >Mature_335_residues MLLRKICSYLFCSSLACSFISVIAVSFRAEPTAPSIAIFASFSHNSLSECIDSCQQELASFGNMPSISLFNAEDNVVKAR KIARNLHKDPNIVSIITLGPIATKVMSQIETQKPIIYAVVPDGEALRFPKEQSNIYGVNDSVDTNQCCFAIHAVTNNATS LVYLQPHEPFPSSLQEEITTKLRASGIKVTGLPISASNVSSRIQFISENRPSAVFFPLSALSEKMGTSFIQSILKENIPL ITNDSSLVTRGACAACSVDYKLSGKQIAYIVRYLLSKKNKEENLSQISAEPILSKITFNEEIIRSLGLPFNIAPVHQFVS FHSSDNTGFPAIQTP
Specific function: Unknown
COG id: COG2984
COG function: function code R; ABC-type uncharacterized transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36589; Mature: 36589
Theoretical pI: Translated: 7.69; Mature: 7.69
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLRKICSYLFCSSLACSFISVIAVSFRAEPTAPSIAIFASFSHNSLSECIDSCQQELAS CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHH FGNMPSISLFNAEDNVVKARKIARNLHKDPNIVSIITLGPIATKVMSQIETQKPIIYAVV HCCCCCEEEECCCCHHHHHHHHHHHHCCCCCEEEEEEECHHHHHHHHHHHCCCCEEEEEC PDGEALRFPKEQSNIYGVNDSVDTNQCCFAIHAVTNNATSLVYLQPHEPFPSSLQEEITT CCCCCCCCCCCCCCEECCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCCCHHHHHHHHH KLRASGIKVTGLPISASNVSSRIQFISENRPSAVFFPLSALSEKMGTSFIQSILKENIPL HHHHCCEEEEECCCCHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCE ITNDSSLVTRGACAACSVDYKLSGKQIAYIVRYLLSKKNKEENLSQISAEPILSKITFNE EECCCCHHCCCCHHHEEECEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCH EIIRSLGLPFNIAPVHQFVSFHSSDNTGFPAIQTP HHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MLLRKICSYLFCSSLACSFISVIAVSFRAEPTAPSIAIFASFSHNSLSECIDSCQQELAS CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHH FGNMPSISLFNAEDNVVKARKIARNLHKDPNIVSIITLGPIATKVMSQIETQKPIIYAVV HCCCCCEEEECCCCHHHHHHHHHHHHCCCCCEEEEEEECHHHHHHHHHHHCCCCEEEEEC PDGEALRFPKEQSNIYGVNDSVDTNQCCFAIHAVTNNATSLVYLQPHEPFPSSLQEEITT CCCCCCCCCCCCCCEECCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCCCHHHHHHHHH KLRASGIKVTGLPISASNVSSRIQFISENRPSAVFFPLSALSEKMGTSFIQSILKENIPL HHHHCCEEEEECCCCHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCE ITNDSSLVTRGACAACSVDYKLSGKQIAYIVRYLLSKKNKEENLSQISAEPILSKITFNE EECCCCHHCCCCHHHEEECEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCH EIIRSLGLPFNIAPVHQFVSFHSSDNTGFPAIQTP HHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA