Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 15835280

GI number: 15835280

Start: 793226

End: 794101

Strand: Reverse

Name: Not Available

Synonym: TC0665

Alternate gene names: NA

Gene position: 794101-793226 (Counterclockwise)

Preceding gene: 15835282

Following gene: 15835279

Centisome position: 74.01

GC content: 42.01

Gene sequence:

>876_bases
ATGAGAATGCAAATTCCAAGAAGTGTTGGCACACATGACGGTTCTTTTCACGCAGATGAAGTGACGGCTTGCGCTTTGTT
GATTATGTTTGACCTTGTTGACAAGGACAAAATTATTCGCACCAGAGATTCTGAAAAATTAGCGCAATGCGAGTATGTTT
GTGATGTAGGGGGGCGGTACTCTATAGCGGATAAGCGTTTTGATCATCATCAGGTGTCTTATACTGGTTCATGGAGTAGT
GCAGGGATGGTTCTTGATTATTTGCATCATCTAGGATCCCTTCCGCATGAAGAGTACGAATATCTCAATAGCACATTAGT
GCATGGTGTAGATGAACAGGATAACGGCCGTTTTTTCTCTAAGGAAGGATTTTGCTCTTTCTCTGATATTATTAAAATTT
ATAATCCCCTGGAAGAGGGAGGGAACACTGATAAGGAATTTTTCTTTGCTTTGCATTTTGCGATAGATCTGCTTACTCGT
TTACGGGAAAAGTTTCGTTATGATCGTATTTGTCGTGACGTTGTTAAGCAAGTAATGGAAAAAGAAGATGTCTGTTTGCG
CTTTGATCGTCCATTAGCTTGGCAAGAAAATTTTTTCTCCTTAGGAGGAGAAAATCATCCGGCGGCTTTTGTTAGTTTCC
CCTGTTCAGATCAATGGATTTTGAGAGGAATTCCTCCTACTTTGGATCGTCGAATGGAGGTGCGGATTCCTTTTCCAGAG
GATTGGGCAGGGTTGCTTGGGGATCAATTGGTTAAGGCTACAGGGATTCCTGGAGCGATTTTTTGCCATAAAGGGTTATT
CCTCTCTGTTTGGGATAGTCGGGAAAGTTGCGAAGAAGCACTGAATTTGGTGTTAAAACAGCAGGGGGTAGTATGA

Upstream 100 bases:

>100_bases
CCTAAACTGCAAGTAGGATGGAGGATTTTCAGCTTTTGGATAGGGTACTACCGGCCGAGGTTTGTTTGTTGTTCTATTGT
CGAGGGGATCACGGAGGATA

Downstream 100 bases:

>100_bases
CTACAATTTTTGAACGAATTATAGAGGGAGCTGTAGAGTGTGATAAGGTTTTTGAGGATGAAAATTTTATCGTGATTAAG
GATAAATTTCCTCAAGCACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 291; Mature: 291

Protein sequence:

>291_residues
MRMQIPRSVGTHDGSFHADEVTACALLIMFDLVDKDKIIRTRDSEKLAQCEYVCDVGGRYSIADKRFDHHQVSYTGSWSS
AGMVLDYLHHLGSLPHEEYEYLNSTLVHGVDEQDNGRFFSKEGFCSFSDIIKIYNPLEEGGNTDKEFFFALHFAIDLLTR
LREKFRYDRICRDVVKQVMEKEDVCLRFDRPLAWQENFFSLGGENHPAAFVSFPCSDQWILRGIPPTLDRRMEVRIPFPE
DWAGLLGDQLVKATGIPGAIFCHKGLFLSVWDSRESCEEALNLVLKQQGVV

Sequences:

>Translated_291_residues
MRMQIPRSVGTHDGSFHADEVTACALLIMFDLVDKDKIIRTRDSEKLAQCEYVCDVGGRYSIADKRFDHHQVSYTGSWSS
AGMVLDYLHHLGSLPHEEYEYLNSTLVHGVDEQDNGRFFSKEGFCSFSDIIKIYNPLEEGGNTDKEFFFALHFAIDLLTR
LREKFRYDRICRDVVKQVMEKEDVCLRFDRPLAWQENFFSLGGENHPAAFVSFPCSDQWILRGIPPTLDRRMEVRIPFPE
DWAGLLGDQLVKATGIPGAIFCHKGLFLSVWDSRESCEEALNLVLKQQGVV
>Mature_291_residues
MRMQIPRSVGTHDGSFHADEVTACALLIMFDLVDKDKIIRTRDSEKLAQCEYVCDVGGRYSIADKRFDHHQVSYTGSWSS
AGMVLDYLHHLGSLPHEEYEYLNSTLVHGVDEQDNGRFFSKEGFCSFSDIIKIYNPLEEGGNTDKEFFFALHFAIDLLTR
LREKFRYDRICRDVVKQVMEKEDVCLRFDRPLAWQENFFSLGGENHPAAFVSFPCSDQWILRGIPPTLDRRMEVRIPFPE
DWAGLLGDQLVKATGIPGAIFCHKGLFLSVWDSRESCEEALNLVLKQQGVV

Specific function: Unknown

COG id: COG4286

COG function: function code S; Uncharacterized conserved protein related to MYG1 family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0160 (MYG1) family [H]

Homologues:

Organism=Homo sapiens, GI145275185, Length=336, Percent_Identity=29.1666666666667, Blast_Score=102, Evalue=4e-22,
Organism=Caenorhabditis elegans, GI25150283, Length=316, Percent_Identity=27.5316455696203, Blast_Score=100, Evalue=2e-21,
Organism=Drosophila melanogaster, GI24645226, Length=336, Percent_Identity=23.5119047619048, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24645224, Length=336, Percent_Identity=23.5119047619048, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI45551849, Length=336, Percent_Identity=23.5119047619048, Blast_Score=73, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003226 [H]

Pfam domain/function: PF03690 UPF0160 [H]

EC number: NA

Molecular weight: Translated: 33355; Mature: 33355

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRMQIPRSVGTHDGSFHADEVTACALLIMFDLVDKDKIIRTRDSEKLAQCEYVCDVGGRY
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHEECCCHHHHHHHHHHHCCCCCE
SIADKRFDHHQVSYTGSWSSAGMVLDYLHHLGSLPHEEYEYLNSTLVHGVDEQDNGRFFS
ECCCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCEEC
KEGFCSFSDIIKIYNPLEEGGNTDKEFFFALHFAIDLLTRLREKFRYDRICRDVVKQVME
CCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
KEDVCLRFDRPLAWQENFFSLGGENHPAAFVSFPCSDQWILRGIPPTLDRRMEVRIPFPE
CCCEEEEECCCCCHHHHHHHCCCCCCCEEEEECCCCCCCEECCCCCCCCCCEEEECCCCH
DWAGLLGDQLVKATGIPGAIFCHKGLFLSVWDSRESCEEALNLVLKQQGVV
HHHHHHHHHHHHHCCCCCCEEECCCCEEEECCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRMQIPRSVGTHDGSFHADEVTACALLIMFDLVDKDKIIRTRDSEKLAQCEYVCDVGGRY
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHEECCCHHHHHHHHHHHCCCCCE
SIADKRFDHHQVSYTGSWSSAGMVLDYLHHLGSLPHEEYEYLNSTLVHGVDEQDNGRFFS
ECCCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCEEC
KEGFCSFSDIIKIYNPLEEGGNTDKEFFFALHFAIDLLTRLREKFRYDRICRDVVKQVME
CCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
KEDVCLRFDRPLAWQENFFSLGGENHPAAFVSFPCSDQWILRGIPPTLDRRMEVRIPFPE
CCCEEEEECCCCCHHHHHHHCCCCCCCEEEEECCCCCCCEECCCCCCCCCCEEEECCCCH
DWAGLLGDQLVKATGIPGAIFCHKGLFLSVWDSRESCEEALNLVLKQQGVV
HHHHHHHHHHHHHCCCCCCEEECCCCEEEECCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9784136 [H]