| Definition | Chlamydia muridarum Nigg, complete genome. |
|---|---|
| Accession | NC_002620 |
| Length | 1,072,950 |
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Identifier: 15835276
GI number: 15835276
Start: 789162
End: 790001
Strand: Reverse
Name: Not Available
Synonym: TC0661
Alternate gene names: 15835276
Gene position: 790001-789162 (Counterclockwise)
Preceding gene: 15835278
Following gene: 15835275
Centisome position: 73.63
GC content: 43.93
Gene sequence:
>840_bases ATGGAAAAAGAACGGGTTCCTCTTCCCAATGTGTTTGATCCAAATCGGAGCTCAGCTGTTTGTTTGTCTGACATTCTATC TATTGGTAGGGGGAGGGCTCCTATTATTATTGCTGGGCCTTGTACTTTAGAAAGTCAAGAACATGCAATTTCCTTAGGGT TAAAAGTTAAGAAATCTGGGGCACATATTTTTCGAGGTTCTATTCGCAAGCCCCGAACCAATCCTTATTCCTTTCAAGGC TGGTCTCCGGATTGTGTAGTTTGGCATAGTCGAGCAAAGGCCGTTCATGGATTACTCACAGAAACAGAGGTTTTAGATGT TCGTGATGTTGAAATTACAGCAGAGCATGTGGATCTTTTGCGAATAGGGGCTCGTAATATGCAGAATTTTGTTCTGCTTG ATGAAGTGAGCCGGAGTCATCGTCCGGTCATTTTAAAGAGGAATCCTGCTGCTACAGTTAAAGAGTGGCTTGGTGCGGCA GAATATTTGTTGCGTAGTGCGAGTTGTCCTGGTGTGATTCTTTGTGAAAGAGGGATTCGCTCTTTCGAAACGTCAACTCG GTACACTCTTGATTTGAATTCCGTAGCATGGGTTAAGAAAGAGACGTCCTTACCTGTTATTGTGGATCCTTCTCATGCGG CAGGAATCCGAGATTTAGTTCTGCCGCTAGCTCGTGCTGCAGTAGCTCTTGGAGCAGATGGAGTGATGATAGAAGTGCAT GAGCACCCAGAGTTAGCTTTATGTGATGGAGCTCAACATATCCTCCCTAGCGAATTAGAGGAATTTGCATTTTGGATGCA AAAAACAAGCGCATTATCGAAAGAAGAAGTTTTCGTATAG
Upstream 100 bases:
>100_bases CATTTTTCTTTTTCATAAAAATCTTTCTATTTCTTTTCTCTTCTCAGTGTGTATGATTTGCTCTCGCTAGGAAAATAAGT AAGAAAAGGAAAAAGATCCC
Downstream 100 bases:
>100_bases ATTCTTATTTTTTTTAAGAATTATGCTGGGTATAGTCCCTGTCGTTAGACCTTTGAGCCGGAGTGAGTATGTATATAAAA AGAAAGAAAGCTTGGATGAC
Product: 3-deoxy-7-phosphoheptulonate synthase
Products: NA
Alternate protein names: 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase; DAHP synthase; Phospho-2-keto-3-deoxyheptonate aldolase [H]
Number of amino acids: Translated: 279; Mature: 279
Protein sequence:
>279_residues MEKERVPLPNVFDPNRSSAVCLSDILSIGRGRAPIIIAGPCTLESQEHAISLGLKVKKSGAHIFRGSIRKPRTNPYSFQG WSPDCVVWHSRAKAVHGLLTETEVLDVRDVEITAEHVDLLRIGARNMQNFVLLDEVSRSHRPVILKRNPAATVKEWLGAA EYLLRSASCPGVILCERGIRSFETSTRYTLDLNSVAWVKKETSLPVIVDPSHAAGIRDLVLPLARAAVALGADGVMIEVH EHPELALCDGAQHILPSELEEFAFWMQKTSALSKEEVFV
Sequences:
>Translated_279_residues MEKERVPLPNVFDPNRSSAVCLSDILSIGRGRAPIIIAGPCTLESQEHAISLGLKVKKSGAHIFRGSIRKPRTNPYSFQG WSPDCVVWHSRAKAVHGLLTETEVLDVRDVEITAEHVDLLRIGARNMQNFVLLDEVSRSHRPVILKRNPAATVKEWLGAA EYLLRSASCPGVILCERGIRSFETSTRYTLDLNSVAWVKKETSLPVIVDPSHAAGIRDLVLPLARAAVALGADGVMIEVH EHPELALCDGAQHILPSELEEFAFWMQKTSALSKEEVFV >Mature_279_residues MEKERVPLPNVFDPNRSSAVCLSDILSIGRGRAPIIIAGPCTLESQEHAISLGLKVKKSGAHIFRGSIRKPRTNPYSFQG WSPDCVVWHSRAKAVHGLLTETEVLDVRDVEITAEHVDLLRIGARNMQNFVLLDEVSRSHRPVILKRNPAATVKEWLGAA EYLLRSASCPGVILCERGIRSFETSTRYTLDLNSVAWVKKETSLPVIVDPSHAAGIRDLVLPLARAAVALGADGVMIEVH EHPELALCDGAQHILPSELEEFAFWMQKTSALSKEEVFV
Specific function: Catalyzes the condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) [H]
COG id: COG2876
COG function: function code E; 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I DAHP synthase family [H]
Homologues:
None
Paralogues:
None
Copy number: 200 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR006218 - InterPro: IPR006268 [H]
Pfam domain/function: PF00793 DAHP_synth_1 [H]
EC number: =2.5.1.54 [H]
Molecular weight: Translated: 30780; Mature: 30780
Theoretical pI: Translated: 7.05; Mature: 7.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKERVPLPNVFDPNRSSAVCLSDILSIGRGRAPIIIAGPCTLESQEHAISLGLKVKKSG CCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCCEEEEEEEEECCC AHIFRGSIRKPRTNPYSFQGWSPDCVVWHSRAKAVHGLLTETEVLDVRDVEITAEHVDLL CEEEECCCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHCCCEEEEEECEEEEHHHHHHH RIGARNMQNFVLLDEVSRSHRPVILKRNPAATVKEWLGAAEYLLRSASCPGVILCERGIR HHCCCCCCCEEEEEHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCH SFETSTRYTLDLNSVAWVKKETSLPVIVDPSHAAGIRDLVLPLARAAVALGADGVMIEVH HHCCCCEEEEECCCEEEEEECCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEE EHPELALCDGAQHILPSELEEFAFWMQKTSALSKEEVFV CCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MEKERVPLPNVFDPNRSSAVCLSDILSIGRGRAPIIIAGPCTLESQEHAISLGLKVKKSG CCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCCEEEEEEEEECCC AHIFRGSIRKPRTNPYSFQGWSPDCVVWHSRAKAVHGLLTETEVLDVRDVEITAEHVDLL CEEEECCCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHCCCEEEEEECEEEEHHHHHHH RIGARNMQNFVLLDEVSRSHRPVILKRNPAATVKEWLGAAEYLLRSASCPGVILCERGIR HHCCCCCCCEEEEEHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCH SFETSTRYTLDLNSVAWVKKETSLPVIVDPSHAAGIRDLVLPLARAAVALGADGVMIEVH HHCCCCEEEEECCCEEEEEECCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEE EHPELALCDGAQHILPSELEEFAFWMQKTSALSKEEVFV CCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10360571; 12743122 [H]