| Definition | Chlamydia muridarum Nigg, complete genome. |
|---|---|
| Accession | NC_002620 |
| Length | 1,072,950 |
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Identifier: 15835266
GI number: 15835266
Start: 778254
End: 779669
Strand: Direct
Name: Not Available
Synonym: TC0651
Alternate gene names: 15835266
Gene position: 778254-779669 (Clockwise)
Preceding gene: 15835265
Following gene: 15835267
Centisome position: 72.53
GC content: 42.16
Gene sequence:
>1416_bases ATGAATGGAAAAGTTCTGTGTGAGGTTTCTGTGTCCTTCCGTTCGATTCTGCTGACGGCTCTGCTTTCACTTTCTTTTAC AAACACTATGCAGGCTGCACACCATCATTATCACCGTTATGATGATAAACTACGCAGACAATACCATAAAAAGGACTTGC CCACTCAAGAGAATGTTCGGAAAGAGTTTTGTAATCCCTACTCTCATAGTAGTGATCCTATCCCTTTGTCACAACAACGA GGAGTCCTATCTCCTATCTGTGATTTAGTCTCAGAGTGCTCGTTTTTGAACGGGATTTCCGTTAGGAGTCTTAAACAAAC ACTGAAAAATTCTGCTGGGACTCAAGTTGCTTTAGACTGGTCTATCCTTCCTCAATGGTTCAATCCTAGATCCTCTTGGG CTCCTAAGCTCTCTATTCGAGATCTTGGATATGGTAAACCCCAGTCCCTTATTGAAGCAGATTCCCCTTGTTGTCAAACC TGCTTCAACCCATCTGCTGCTATTACGATTTACGATTCTTCATGTGGGAAGGGTGTTGTCCAAGTGTCATACACCCTTGT TCGTTATTGGAGAGAAACGGCTGCACTTGCAGGGCAAACTATGATGCTTGCAGGAAGTATTAATGATTATCCTGCTCGCC AAAACATATTCTCTCAACTTACATTTTCCCAAACTTTCCCTAATGAGAGAGTAAATCTAACTGTTGGTCAATACTCTCTT TACTCGATAGACGGAACGCTGTACAACAATGATCAGCAGCTAGGATTTATTAGTTATGCGTTGTCGCAAAATCCAACAGC GACTTATTCCTCTGGAAGCCTTGGCGCCTATCTACAAGTCGCTCCAACAGAAAGCACCTGTCTTCAAGTTGGGTTCCAAG ATGCCTATAATATTTCAGGTTCCTCGATCAAATGGAATAATCTTACAAAAAATAAGTATAACTTCCATGGCTATGCATCT TGGGCTCCACACTGTTGCTTAGGACCTGGACAATACTCTGTTCTTCTTTATGTAACCAGAAAGGTTCCTGAGCAAATGAT GCAGACAATGGGCTGGTCTGTGAATGCAAGTCAATACATCTCTTCTAAACTTTATGTATTTGGAAGATACAGCGGAGTCA CAGGCCAATTGTCTCCTATTAACCGAACCTATTCATTTGGCTTAGTCTCTCCTAATTTATTGAACCGTAACCCACAAGAC TTATTTGGAGTAGCTTGCGCATTCAATAATATACACGCCTCCGCCTTTCAAAATGCTCAAAGAAAATATGAAACTGTGAT CGAGGGATTTGCAACTATTGGTTGCGGACCTTACATCTCCTTTGCTCCAGATTTCCAACTTTACCTCTATCCTGCTCTGC GTCCAAATAAACAAAGCGCCCGAGTCTATAGCGTTCGCGCAAACCTAGCTATTTAG
Upstream 100 bases:
>100_bases AAGCAATGAAGCTGCAGCCCTTTTATTACGTCACCGTCTCGATAAATAGTTCCTACTGAAATAGAAATTAAACCTAGATA AAAAAATTTATTTCTACTAC
Downstream 100 bases:
>100_bases TAGGTTTGCACGAATACCTAGGGGGGCTTTGTAGTTAAATACCTTAATAACCCCAAAAAAGGAGGCATTATGCCTTACGG AACTCGTTATCCAACATTAG
Product: hypothetical protein
Products: NA
Alternate protein names: Outer membrane protein AaxA [H]
Number of amino acids: Translated: 471; Mature: 471
Protein sequence:
>471_residues MNGKVLCEVSVSFRSILLTALLSLSFTNTMQAAHHHYHRYDDKLRRQYHKKDLPTQENVRKEFCNPYSHSSDPIPLSQQR GVLSPICDLVSECSFLNGISVRSLKQTLKNSAGTQVALDWSILPQWFNPRSSWAPKLSIRDLGYGKPQSLIEADSPCCQT CFNPSAAITIYDSSCGKGVVQVSYTLVRYWRETAALAGQTMMLAGSINDYPARQNIFSQLTFSQTFPNERVNLTVGQYSL YSIDGTLYNNDQQLGFISYALSQNPTATYSSGSLGAYLQVAPTESTCLQVGFQDAYNISGSSIKWNNLTKNKYNFHGYAS WAPHCCLGPGQYSVLLYVTRKVPEQMMQTMGWSVNASQYISSKLYVFGRYSGVTGQLSPINRTYSFGLVSPNLLNRNPQD LFGVACAFNNIHASAFQNAQRKYETVIEGFATIGCGPYISFAPDFQLYLYPALRPNKQSARVYSVRANLAI
Sequences:
>Translated_471_residues MNGKVLCEVSVSFRSILLTALLSLSFTNTMQAAHHHYHRYDDKLRRQYHKKDLPTQENVRKEFCNPYSHSSDPIPLSQQR GVLSPICDLVSECSFLNGISVRSLKQTLKNSAGTQVALDWSILPQWFNPRSSWAPKLSIRDLGYGKPQSLIEADSPCCQT CFNPSAAITIYDSSCGKGVVQVSYTLVRYWRETAALAGQTMMLAGSINDYPARQNIFSQLTFSQTFPNERVNLTVGQYSL YSIDGTLYNNDQQLGFISYALSQNPTATYSSGSLGAYLQVAPTESTCLQVGFQDAYNISGSSIKWNNLTKNKYNFHGYAS WAPHCCLGPGQYSVLLYVTRKVPEQMMQTMGWSVNASQYISSKLYVFGRYSGVTGQLSPINRTYSFGLVSPNLLNRNPQD LFGVACAFNNIHASAFQNAQRKYETVIEGFATIGCGPYISFAPDFQLYLYPALRPNKQSARVYSVRANLAI >Mature_471_residues MNGKVLCEVSVSFRSILLTALLSLSFTNTMQAAHHHYHRYDDKLRRQYHKKDLPTQENVRKEFCNPYSHSSDPIPLSQQR GVLSPICDLVSECSFLNGISVRSLKQTLKNSAGTQVALDWSILPQWFNPRSSWAPKLSIRDLGYGKPQSLIEADSPCCQT CFNPSAAITIYDSSCGKGVVQVSYTLVRYWRETAALAGQTMMLAGSINDYPARQNIFSQLTFSQTFPNERVNLTVGQYSL YSIDGTLYNNDQQLGFISYALSQNPTATYSSGSLGAYLQVAPTESTCLQVGFQDAYNISGSSIKWNNLTKNKYNFHGYAS WAPHCCLGPGQYSVLLYVTRKVPEQMMQTMGWSVNASQYISSKLYVFGRYSGVTGQLSPINRTYSFGLVSPNLLNRNPQD LFGVACAFNNIHASAFQNAQRKYETVIEGFATIGCGPYISFAPDFQLYLYPALRPNKQSARVYSVRANLAI
Specific function: Facilitates L-arginine uptake, as part of the AaxABC system. The arginine uptake by the bacterium in the macrophage may be a virulence factor against the host innate immune response [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell outer membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the oprB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007049 [H]
Pfam domain/function: PF04966 OprB [H]
EC number: NA
Molecular weight: Translated: 52550; Mature: 52550
Theoretical pI: Translated: 8.91; Mature: 8.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGKVLCEVSVSFRSILLTALLSLSFTNTMQAAHHHYHRYDDKLRRQYHKKDLPTQENVR CCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH KEFCNPYSHSSDPIPLSQQRGVLSPICDLVSECSFLNGISVRSLKQTLKNSAGTQVALDW HHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEH SILPQWFNPRSSWAPKLSIRDLGYGKPQSLIEADSPCCQTCFNPSAAITIYDSSCGKGVV EECCCCCCCCCCCCCCEEEECCCCCCCHHHHHCCCCHHHHHCCCCEEEEEEECCCCCCCH QVSYTLVRYWRETAALAGQTMMLAGSINDYPARQNIFSQLTFSQTFPNERVNLTVGQYSL HHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCEEE YSIDGTLYNNDQQLGFISYALSQNPTATYSSGSLGAYLQVAPTESTCLQVGFQDAYNISG EEECCEEECCCCCEEEEEEECCCCCCCEECCCCCCEEEEEECCCCHHEEECCCHHCCCCC SSIKWNNLTKNKYNFHGYASWAPHCCLGPGQYSVLLYVTRKVPEQMMQTMGWSVNASQYI CEEEECCCCCCCCCCCEECCCCCCEECCCCCEEEEEEEEHHHHHHHHHHCCCCCCHHHHH SSKLYVFGRYSGVTGQLSPINRTYSFGLVSPNLLNRNPQDLFGVACAFNNIHASAFQNAQ CCEEEEEEEECCCCCCCCCCCCEEEECCCCCHHHCCCHHHHHHHHHHHCCHHHHHHHHHH RKYETVIEGFATIGCGPYISFAPDFQLYLYPALRPNKQSARVYSVRANLAI HHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEECCCC >Mature Secondary Structure MNGKVLCEVSVSFRSILLTALLSLSFTNTMQAAHHHYHRYDDKLRRQYHKKDLPTQENVR CCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH KEFCNPYSHSSDPIPLSQQRGVLSPICDLVSECSFLNGISVRSLKQTLKNSAGTQVALDW HHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEH SILPQWFNPRSSWAPKLSIRDLGYGKPQSLIEADSPCCQTCFNPSAAITIYDSSCGKGVV EECCCCCCCCCCCCCCEEEECCCCCCCHHHHHCCCCHHHHHCCCCEEEEEEECCCCCCCH QVSYTLVRYWRETAALAGQTMMLAGSINDYPARQNIFSQLTFSQTFPNERVNLTVGQYSL HHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCEEE YSIDGTLYNNDQQLGFISYALSQNPTATYSSGSLGAYLQVAPTESTCLQVGFQDAYNISG EEECCEEECCCCCEEEEEEECCCCCCCEECCCCCCEEEEEECCCCHHEEECCCHHCCCCC SSIKWNNLTKNKYNFHGYASWAPHCCLGPGQYSVLLYVTRKVPEQMMQTMGWSVNASQYI CEEEECCCCCCCCCCCEECCCCCCEECCCCCEEEEEEEEHHHHHHHHHHCCCCCCHHHHH SSKLYVFGRYSGVTGQLSPINRTYSFGLVSPNLLNRNPQDLFGVACAFNNIHASAFQNAQ CCEEEEEEEECCCCCCCCCCCCEEEECCCCCHHHCCCHHHHHHHHHHHCCHHHHHHHHHH RKYETVIEGFATIGCGPYISFAPDFQLYLYPALRPNKQSARVYSVRANLAI HHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10684935 [H]