| Definition | Chlamydia muridarum Nigg, complete genome. |
|---|---|
| Accession | NC_002620 |
| Length | 1,072,950 |
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Identifier: 15835244
GI number: 15835244
Start: 753556
End: 755256
Strand: Direct
Name: Not Available
Synonym: TC0629
Alternate gene names: NA
Gene position: 753556-755256 (Clockwise)
Preceding gene: 15835243
Following gene: 15835245
Centisome position: 70.23
GC content: 39.56
Gene sequence:
>1701_bases ATGGGATTATCTCGCCTAATTTTATTTGGCTTACTTTCTTTACCGCTCTCAGCAAGCTGCGACTTCCCCCCCAGTGTTTC CCAGAAGATATTATTCTTGTGTCAAAAATCTATTCCTCAAGCTCTGGAGTCCTATCTTGAGGCATCTACAACCTATCAAC AACATAACTTTTCTATATTGCGCTTAATAGCTAAGTCATACTTACAACAAAGTCTCTTTTCTGAAGATGCTTACGTACGC AAAAGCGCAATTATTGGAGCGGGGCTTTCTGGCTCATCTGAGACTCTAGATCTACTGTCTGAATCCATAGAAACACAGGA TCTTTATGAGCAGCTACTTATTTTAAATGCTGCAGGCAATCAATTAGGCAAAACTTCCGATCGTCTTTTATTCAAAGGAT TAACAGCACCTCATCCTATTATTCGCTTGGAAGCTGCTTACCGTCTGGCCTGTATGAAAAACAGTAAAGTAAGTGACTAC CTCTATTCTTTTATCCACCAGCTTCCAGAAGAAATCCAAAACTTAGCAGCAACGATTTTTTTGCAGCTCGAAACGGAAGA AGCAGATGCTTATGTTCATAGACTCCTGTCTTCTCCTAATAGTCTAACAAGAAACTATATGGCTTATCTAATTGGAGAAT ATCAACAGAGGAGATTTCTTCCAACGCTCCGCTCGTTGCTTACCAGCGCAGCTCCTTTAGACCAAGAAGGATCTTTGTAT GCTATAGGAAAATTAGAAGATGCCAGCAGCTATCCTAAAATCAAAGCATTAAGCTCCAAATCTAACCCTGAAGTGGCTCT TGCTGCTGCTCAGACATTATTATTCTTGGGTAAAGAAGATGAGGCTCTTCCTATCCTAACTACTTTTTGCCAGCAAGAGC TTCCTCGAGCTATTTATACCTCTCGTTTCCTTTCATTAGAAAAAGGAGAAGAGCTTCTTTTACCCATCTTTTGTAAAGCT ATTAAAGAAGAAATTAAACTGAATGCTGCTTTGGCTCTTGTCCACTTGGGAAGCGTTAATCACCTAGTGCTTAGTTATTT AACAGAATTTTTAGAAAATAAAATTCTCCACCGCATATTTTTACCCACCCATTCGATAGGAAAAGCCACGCAGTTTTGGA AAGAGTGTACGGCACTCCCTCTTCTAAGCCCAGAAGAAAAAGCAAGAGCTTTGGCAATGTATCGCGCAGCAGAAGATACG ATCCTCTCTAGTTTATTAAAATTACCTAACAATGCCTATCTGCCTTATTTGGAACGTATTCTAACTTCACAAAAAACCCC TCTAGCAGCTAAAGCTATTGCTTTTTTATCAGTAACAGCTCATCCTCAGGCACTTTCTTTAGTCTCGAAAGCAGCACTAA CTCCAGGAGACCCTATCATTCGCGCTTATGCGAATTTAGCTTTATATACAATGACGCAAGATCCTGAAAAGAAAGCCTTA TTATATCAATATGCCGAACAGTTAATAGGAGACACGATTTTGTTTACAGATGAGGAGAATCCCCTGCCTTCTCCCCATTC TTCCTACCTGCGATATCAAGTGTCCCCAGAAACTCGTTCTCAACTCATGCTAACTATTTTAGAAACCCTAGTTTCTTCTA AAACTGATGAAGACATCCGAGTTTTTCTTTCGCTAATGAAAAAAACCCATTACAAAAATATCCCCATCTTATCTGGATTA TTAATGAGAATAGTGGAGTGA
Upstream 100 bases:
>100_bases GTGGGTTAATCATCAAACAAATAGAAGGTTGTGTATATAATATACAGGGATTGCCTATAAAGACGCTGAACCAGTTGCTC ATGGAGTTTAACATCAGCTT
Downstream 100 bases:
>100_bases TCTGTAGTGAAACGATTTTTCCTACTTTGTGTCGGAGTGATTCTCGCTCATACTTCCCCCTCGGAAGGGCTTTCTCATCA ACAAGCTATCCAGAAAAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 566; Mature: 565
Protein sequence:
>566_residues MGLSRLILFGLLSLPLSASCDFPPSVSQKILFLCQKSIPQALESYLEASTTYQQHNFSILRLIAKSYLQQSLFSEDAYVR KSAIIGAGLSGSSETLDLLSESIETQDLYEQLLILNAAGNQLGKTSDRLLFKGLTAPHPIIRLEAAYRLACMKNSKVSDY LYSFIHQLPEEIQNLAATIFLQLETEEADAYVHRLLSSPNSLTRNYMAYLIGEYQQRRFLPTLRSLLTSAAPLDQEGSLY AIGKLEDASSYPKIKALSSKSNPEVALAAAQTLLFLGKEDEALPILTTFCQQELPRAIYTSRFLSLEKGEELLLPIFCKA IKEEIKLNAALALVHLGSVNHLVLSYLTEFLENKILHRIFLPTHSIGKATQFWKECTALPLLSPEEKARALAMYRAAEDT ILSSLLKLPNNAYLPYLERILTSQKTPLAAKAIAFLSVTAHPQALSLVSKAALTPGDPIIRAYANLALYTMTQDPEKKAL LYQYAEQLIGDTILFTDEENPLPSPHSSYLRYQVSPETRSQLMLTILETLVSSKTDEDIRVFLSLMKKTHYKNIPILSGL LMRIVE
Sequences:
>Translated_566_residues MGLSRLILFGLLSLPLSASCDFPPSVSQKILFLCQKSIPQALESYLEASTTYQQHNFSILRLIAKSYLQQSLFSEDAYVR KSAIIGAGLSGSSETLDLLSESIETQDLYEQLLILNAAGNQLGKTSDRLLFKGLTAPHPIIRLEAAYRLACMKNSKVSDY LYSFIHQLPEEIQNLAATIFLQLETEEADAYVHRLLSSPNSLTRNYMAYLIGEYQQRRFLPTLRSLLTSAAPLDQEGSLY AIGKLEDASSYPKIKALSSKSNPEVALAAAQTLLFLGKEDEALPILTTFCQQELPRAIYTSRFLSLEKGEELLLPIFCKA IKEEIKLNAALALVHLGSVNHLVLSYLTEFLENKILHRIFLPTHSIGKATQFWKECTALPLLSPEEKARALAMYRAAEDT ILSSLLKLPNNAYLPYLERILTSQKTPLAAKAIAFLSVTAHPQALSLVSKAALTPGDPIIRAYANLALYTMTQDPEKKAL LYQYAEQLIGDTILFTDEENPLPSPHSSYLRYQVSPETRSQLMLTILETLVSSKTDEDIRVFLSLMKKTHYKNIPILSGL LMRIVE >Mature_565_residues GLSRLILFGLLSLPLSASCDFPPSVSQKILFLCQKSIPQALESYLEASTTYQQHNFSILRLIAKSYLQQSLFSEDAYVRK SAIIGAGLSGSSETLDLLSESIETQDLYEQLLILNAAGNQLGKTSDRLLFKGLTAPHPIIRLEAAYRLACMKNSKVSDYL YSFIHQLPEEIQNLAATIFLQLETEEADAYVHRLLSSPNSLTRNYMAYLIGEYQQRRFLPTLRSLLTSAAPLDQEGSLYA IGKLEDASSYPKIKALSSKSNPEVALAAAQTLLFLGKEDEALPILTTFCQQELPRAIYTSRFLSLEKGEELLLPIFCKAI KEEIKLNAALALVHLGSVNHLVLSYLTEFLENKILHRIFLPTHSIGKATQFWKECTALPLLSPEEKARALAMYRAAEDTI LSSLLKLPNNAYLPYLERILTSQKTPLAAKAIAFLSVTAHPQALSLVSKAALTPGDPIIRAYANLALYTMTQDPEKKALL YQYAEQLIGDTILFTDEENPLPSPHSSYLRYQVSPETRSQLMLTILETLVSSKTDEDIRVFLSLMKKTHYKNIPILSGLL MRIVE
Specific function: Unknown
COG id: COG1413
COG function: function code C; FOG: HEAT repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63145; Mature: 63014
Theoretical pI: Translated: 6.74; Mature: 6.74
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLSRLILFGLLSLPLSASCDFPPSVSQKILFLCQKSIPQALESYLEASTTYQQHNFSIL CCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH RLIAKSYLQQSLFSEDAYVRKSAIIGAGLSGSSETLDLLSESIETQDLYEQLLILNAAGN HHHHHHHHHHHHHCCHHHHHHHHHEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCC QLGKTSDRLLFKGLTAPHPIIRLEAAYRLACMKNSKVSDYLYSFIHQLPEEIQNLAATIF CCCCCHHHHHHHCCCCCCCCEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHEE LQLETEEADAYVHRLLSSPNSLTRNYMAYLIGEYQQRRFLPTLRSLLTSAAPLDQEGSLY EEEECCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEE AIGKLEDASSYPKIKALSSKSNPEVALAAAQTLLFLGKEDEALPILTTFCQQELPRAIYT EEECCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH SRFLSLEKGEELLLPIFCKAIKEEIKLNAALALVHLGSVNHLVLSYLTEFLENKILHRIF HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH LPTHSIGKATQFWKECTALPLLSPEEKARALAMYRAAEDTILSSLLKLPNNAYLPYLERI CCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH LTSQKTPLAAKAIAFLSVTAHPQALSLVSKAALTPGDPIIRAYANLALYTMTQDPEKKAL HCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHEEEEECCCCHHHHH LYQYAEQLIGDTILFTDEENPLPSPHSSYLRYQVSPETRSQLMLTILETLVSSKTDEDIR HHHHHHHHHCCEEEEECCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCHHHH VFLSLMKKTHYKNIPILSGLLMRIVE HHHHHHHHHCCCCCHHHHHHHHHHCC >Mature Secondary Structure GLSRLILFGLLSLPLSASCDFPPSVSQKILFLCQKSIPQALESYLEASTTYQQHNFSIL CHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH RLIAKSYLQQSLFSEDAYVRKSAIIGAGLSGSSETLDLLSESIETQDLYEQLLILNAAGN HHHHHHHHHHHHHCCHHHHHHHHHEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCC QLGKTSDRLLFKGLTAPHPIIRLEAAYRLACMKNSKVSDYLYSFIHQLPEEIQNLAATIF CCCCCHHHHHHHCCCCCCCCEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHEE LQLETEEADAYVHRLLSSPNSLTRNYMAYLIGEYQQRRFLPTLRSLLTSAAPLDQEGSLY EEEECCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEE AIGKLEDASSYPKIKALSSKSNPEVALAAAQTLLFLGKEDEALPILTTFCQQELPRAIYT EEECCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH SRFLSLEKGEELLLPIFCKAIKEEIKLNAALALVHLGSVNHLVLSYLTEFLENKILHRIF HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH LPTHSIGKATQFWKECTALPLLSPEEKARALAMYRAAEDTILSSLLKLPNNAYLPYLERI CCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH LTSQKTPLAAKAIAFLSVTAHPQALSLVSKAALTPGDPIIRAYANLALYTMTQDPEKKAL HCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHEEEEECCCCHHHHH LYQYAEQLIGDTILFTDEENPLPSPHSSYLRYQVSPETRSQLMLTILETLVSSKTDEDIR HHHHHHHHHCCEEEEECCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCHHHH VFLSLMKKTHYKNIPILSGLLMRIVE HHHHHHHHHCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA