| Definition | Chlamydia muridarum Nigg, complete genome. |
|---|---|
| Accession | NC_002620 |
| Length | 1,072,950 |
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Identifier: 15835009
GI number: 15835009
Start: 454046
End: 455521
Strand: Direct
Name: Not Available
Synonym: TC0390
Alternate gene names: NA
Gene position: 454046-455521 (Clockwise)
Preceding gene: 15835008
Following gene: 15835010
Centisome position: 42.32
GC content: 40.04
Gene sequence:
>1476_bases GTGTGGAAGCACTGGATTCGCATTATTGGGATAGGTAGTCTTCTTTCTCCAACAGTCTTACTTGCATTGGGAGAGAAGAC GCCAGCCTTTTTTTTAGAAAGGAATCGTAATTTTTGGAATATAGATCCCTATTGTTTAGAGTCTATTTGTGCTTGTTTTA TTTCTAATCAAGATCCTTTAAGTGCTGAACGGTTAGAGGTTTTGTTTCCACAACTATCTCAAGAGGATCTATTGGTTTTT GCTAAGTGCATTTTGTCATCAAAAAATGCAGAGTACCTTTTCTCGGATGCAGAAGAGAAAATTTTTGCTAAGCTAGCTCT TCCTCGCGTTTCCTTGGGGTGTAATCGAGCTGATGATTTGGCTAAGGTGTTAGTATTAGCCGAAGCCGGTTCCACTGCAA AAGAGCAGAAAGCTCGATACTATTCTTTATATTTGGATGTTCTAGCTTTGCGAGCCTATGTTGAGAGAGCGCGTTTAGTA AATGCAACTTGTGAAGTTGCTAGTCAAATAGATTTAGCAAGTATAGAGGCGATTAATACTATTCTTTTTGAAAAAGAAGG AGTTCGTTACCCCTCCAAAAAAGAGATGTTCGAAAGCCGATTTTCTGAGTTGGCAGCTGTTACAGATAGCAAGTTTGGAG TTTGCTTGGGGAGTGTTGTGCTTTATCAAGCTGTAGCTCAACGACTCAATCTCTCCCTTGAGGCTGTAACTCCTCCAGGC CATATTTATTTGCGTTATAAGGATGTGGTAAATATTGAAACGACTTCTGGGGGAAGGCATATTCCTACGGAAAAGTATTG TGAGTGTATACCGGAATCTCAGTTGCGAGTGCGATCGCAGGAAGAGCTGATAGGTTTAACCTTTATGAACCGGGGGGCTT TTTTTTTACAAAAAGGAGAATTTCTTCAAGCTTCTATAGCCTATGAGCAAGCCAAAAAGTATTTGGCGGATGAGCAGATC TCTGACTTGTTAGGTATAACATACATTCTTTTGGGCAAAAAAAAAGAGGGAGAGGATATTTTAAAAAAATCTTCAGAAAG GACTCGCAAAAGCTCGGCTATACACGATTATTTTGAACGCAATATTTCTCCTGAAATATTGGCAGTATTATTTGCTGATT CGGGTGTAACCTATCAAGAAACTTTGGATTATCACAAAAAACTTCTTGTGCTTGTTGAGAAGTTCCCTAGGAGTGGTGCT TTGAGATTACGACTTGCTGCGACAGCTTTGGAACTAGGATTAGTGAAGAAGGGGGAGCAGCTTTTAGAAAAGAGCGTGGA AGATGCTCCGGATGATCTCTTCTTGCGACTTCAGCTTTGTAAAATTCTTTGTAATAGGCACGACTATACGCGAGCAAAGC AACACTTTGATCAGGCTAAGAAGATCTTAGCTGAGGAAGGGATGCTTTCGGAAAAATCTTCCTATACTCTTTTAAAAATA CTCGAGAAAAAACTAGCTCTTGTTTCTCCCCACTGA
Upstream 100 bases:
>100_bases GAAGGGGGATATTAAATCCGGCATGTCAGTAGAGCTTACTATGGCCAAGGATGTTGTTGTTTTTAAAACTAAAACAAATT CTGTGGTGTAGGGCGTTTGT
Downstream 100 bases:
>100_bases TTTTTCTTTGTGCGCAAAGATCTTAACAAATTGAAAAATAAGGGCTTGGAGAATCTCTTAAAAGAGAGCGTTTTTTTCTA AAAAATTGCTTTAAATTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 491; Mature: 491
Protein sequence:
>491_residues MWKHWIRIIGIGSLLSPTVLLALGEKTPAFFLERNRNFWNIDPYCLESICACFISNQDPLSAERLEVLFPQLSQEDLLVF AKCILSSKNAEYLFSDAEEKIFAKLALPRVSLGCNRADDLAKVLVLAEAGSTAKEQKARYYSLYLDVLALRAYVERARLV NATCEVASQIDLASIEAINTILFEKEGVRYPSKKEMFESRFSELAAVTDSKFGVCLGSVVLYQAVAQRLNLSLEAVTPPG HIYLRYKDVVNIETTSGGRHIPTEKYCECIPESQLRVRSQEELIGLTFMNRGAFFLQKGEFLQASIAYEQAKKYLADEQI SDLLGITYILLGKKKEGEDILKKSSERTRKSSAIHDYFERNISPEILAVLFADSGVTYQETLDYHKKLLVLVEKFPRSGA LRLRLAATALELGLVKKGEQLLEKSVEDAPDDLFLRLQLCKILCNRHDYTRAKQHFDQAKKILAEEGMLSEKSSYTLLKI LEKKLALVSPH
Sequences:
>Translated_491_residues MWKHWIRIIGIGSLLSPTVLLALGEKTPAFFLERNRNFWNIDPYCLESICACFISNQDPLSAERLEVLFPQLSQEDLLVF AKCILSSKNAEYLFSDAEEKIFAKLALPRVSLGCNRADDLAKVLVLAEAGSTAKEQKARYYSLYLDVLALRAYVERARLV NATCEVASQIDLASIEAINTILFEKEGVRYPSKKEMFESRFSELAAVTDSKFGVCLGSVVLYQAVAQRLNLSLEAVTPPG HIYLRYKDVVNIETTSGGRHIPTEKYCECIPESQLRVRSQEELIGLTFMNRGAFFLQKGEFLQASIAYEQAKKYLADEQI SDLLGITYILLGKKKEGEDILKKSSERTRKSSAIHDYFERNISPEILAVLFADSGVTYQETLDYHKKLLVLVEKFPRSGA LRLRLAATALELGLVKKGEQLLEKSVEDAPDDLFLRLQLCKILCNRHDYTRAKQHFDQAKKILAEEGMLSEKSSYTLLKI LEKKLALVSPH >Mature_491_residues MWKHWIRIIGIGSLLSPTVLLALGEKTPAFFLERNRNFWNIDPYCLESICACFISNQDPLSAERLEVLFPQLSQEDLLVF AKCILSSKNAEYLFSDAEEKIFAKLALPRVSLGCNRADDLAKVLVLAEAGSTAKEQKARYYSLYLDVLALRAYVERARLV NATCEVASQIDLASIEAINTILFEKEGVRYPSKKEMFESRFSELAAVTDSKFGVCLGSVVLYQAVAQRLNLSLEAVTPPG HIYLRYKDVVNIETTSGGRHIPTEKYCECIPESQLRVRSQEELIGLTFMNRGAFFLQKGEFLQASIAYEQAKKYLADEQI SDLLGITYILLGKKKEGEDILKKSSERTRKSSAIHDYFERNISPEILAVLFADSGVTYQETLDYHKKLLVLVEKFPRSGA LRLRLAATALELGLVKKGEQLLEKSVEDAPDDLFLRLQLCKILCNRHDYTRAKQHFDQAKKILAEEGMLSEKSSYTLLKI LEKKLALVSPH
Specific function: Unknown
COG id: COG2912
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55487; Mature: 55487
Theoretical pI: Translated: 7.40; Mature: 7.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWKHWIRIIGIGSLLSPTVLLALGEKTPAFFLERNRNFWNIDPYCLESICACFISNQDPL CCHHHEEEEECCHHHHHHHEEEECCCCCEEHEECCCCCCCCCHHHHHHHHHHHHCCCCCC SAERLEVLFPQLSQEDLLVFAKCILSSKNAEYLFSDAEEKIFAKLALPRVSLGCNRADDL CHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHCCHHHCCCCCHHHH AKVLVLAEAGSTAKEQKARYYSLYLDVLALRAYVERARLVNATCEVASQIDLASIEAINT HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH ILFEKEGVRYPSKKEMFESRFSELAAVTDSKFGVCLGSVVLYQAVAQRLNLSLEAVTPPG HHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCC HIYLRYKDVVNIETTSGGRHIPTEKYCECIPESQLRVRSQEELIGLTFMNRGAFFLQKGE EEEEEEEEEEEEEECCCCCCCCHHHHHHHCCCHHHHHCCHHHHEEEEEECCCEEEEECCC FLQASIAYEQAKKYLADEQISDLLGITYILLGKKKEGEDILKKSSERTRKSSAIHDYFER HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHCCHHHHHHHHHHHHHHHC NISPEILAVLFADSGVTYQETLDYHKKLLVLVEKFPRSGALRLRLAATALELGLVKKGEQ CCCHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHH LLEKSVEDAPDDLFLRLQLCKILCNRHDYTRAKQHFDQAKKILAEEGMLSEKSSYTLLKI HHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH LEKKLALVSPH HHHHHHHCCCC >Mature Secondary Structure MWKHWIRIIGIGSLLSPTVLLALGEKTPAFFLERNRNFWNIDPYCLESICACFISNQDPL CCHHHEEEEECCHHHHHHHEEEECCCCCEEHEECCCCCCCCCHHHHHHHHHHHHCCCCCC SAERLEVLFPQLSQEDLLVFAKCILSSKNAEYLFSDAEEKIFAKLALPRVSLGCNRADDL CHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHCCHHHCCCCCHHHH AKVLVLAEAGSTAKEQKARYYSLYLDVLALRAYVERARLVNATCEVASQIDLASIEAINT HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH ILFEKEGVRYPSKKEMFESRFSELAAVTDSKFGVCLGSVVLYQAVAQRLNLSLEAVTPPG HHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCC HIYLRYKDVVNIETTSGGRHIPTEKYCECIPESQLRVRSQEELIGLTFMNRGAFFLQKGE EEEEEEEEEEEEEECCCCCCCCHHHHHHHCCCHHHHHCCHHHHEEEEEECCCEEEEECCC FLQASIAYEQAKKYLADEQISDLLGITYILLGKKKEGEDILKKSSERTRKSSAIHDYFER HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHCCHHHHHHHHHHHHHHHC NISPEILAVLFADSGVTYQETLDYHKKLLVLVEKFPRSGALRLRLAATALELGLVKKGEQ CCCHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHH LLEKSVEDAPDDLFLRLQLCKILCNRHDYTRAKQHFDQAKKILAEEGMLSEKSSYTLLKI HHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH LEKKLALVSPH HHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA