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Identifier: 15835003

GI number: 15835003

Start: 445476

End: 446231

Strand: Direct

Name: Not Available

Synonym: TC0384

Alternate gene names: 15835003

Gene position: 445476-446231 (Clockwise)

Preceding gene: 15835002

Following gene: 15835008

Centisome position: 41.52

GC content: 40.21

Gene sequence:

>756_bases
ATGAATGTTGCTGATCTTTTGCATGTTTTGAATGAATTATTATATCCTGAATTGTTTAATGATTATGGCCCTAACGGGTT
GCAGGTTGGGGATGCGCAGGCACCAGTCCGTAAAATAGCTGTTGCAGTGACTGCAGATTTAGCAACTATTGAGAAGGCTA
TTGCTTGTGAATCGAATGTTTTGCTTGTGCATCACGGGTTATTTTGGAAAGGAATGCCTTATCCTATCACAGGGATGCTT
TATCAAAGAATGCAGCGTCTTATTGAGAACAATATTCAGTTAATAGCTTATCATCTGCCTTTAGATGCGCATCCAGAAGT
TGGGAATAATTGGAAAGTGGCTAAAGATTTAGGATGGGAGCGATTAGAATCTTTTGGGAGCACGAAACCGTCTTTAGGTG
TAAAAGGGGTGTTCCCAGAAATAGGCATTCATGACTTTGTGTCTCAATTATCCTCCTATTATCAAGCTCCAGTATTAGCT
AAAGCCCTTGGAGGAAAGGAAAGTATTTCTTCTGCAGCATTGATTTCTGGCGGAGCTTATAAAGAAATTTCTGAAGCTAA
GAGTCAGGAAGTAGATTGCTTTATCACAGGAAACTTCGATGAGCCAGCATGGTCCTTAGCACATGAACTAGCCATTAACT
TCTTAGCTTTCGGACACACAGCTACTGAAAAGGTCGGACCAAAAGCCTTGACTCAGTACTTGAAACAAGTGGGATGTGAT
TCTGTTGTATTTTTGGATACAGAAAATCCTTTTTGA

Upstream 100 bases:

>100_bases
ATTTTTTGTCAGAGTACTGTAAATTTCCTGAAAAGATGGCCGGTTATTCTGGGGATCAATAAAACAAAAAGAGTCTATTA
AAACCTCGTAAGGTTTCTAT

Downstream 100 bases:

>100_bases
TTGAGAAACGGATCATCGGAAAAGAAGTTCCTTCATAAAACCCTCGATCTCATGAGTAAGGTTATTAGGAGGAAAAGCTC
CACGTTGCCTTAGATGAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MNVADLLHVLNELLYPELFNDYGPNGLQVGDAQAPVRKIAVAVTADLATIEKAIACESNVLLVHHGLFWKGMPYPITGML
YQRMQRLIENNIQLIAYHLPLDAHPEVGNNWKVAKDLGWERLESFGSTKPSLGVKGVFPEIGIHDFVSQLSSYYQAPVLA
KALGGKESISSAALISGGAYKEISEAKSQEVDCFITGNFDEPAWSLAHELAINFLAFGHTATEKVGPKALTQYLKQVGCD
SVVFLDTENPF

Sequences:

>Translated_251_residues
MNVADLLHVLNELLYPELFNDYGPNGLQVGDAQAPVRKIAVAVTADLATIEKAIACESNVLLVHHGLFWKGMPYPITGML
YQRMQRLIENNIQLIAYHLPLDAHPEVGNNWKVAKDLGWERLESFGSTKPSLGVKGVFPEIGIHDFVSQLSSYYQAPVLA
KALGGKESISSAALISGGAYKEISEAKSQEVDCFITGNFDEPAWSLAHELAINFLAFGHTATEKVGPKALTQYLKQVGCD
SVVFLDTENPF
>Mature_251_residues
MNVADLLHVLNELLYPELFNDYGPNGLQVGDAQAPVRKIAVAVTADLATIEKAIACESNVLLVHHGLFWKGMPYPITGML
YQRMQRLIENNIQLIAYHLPLDAHPEVGNNWKVAKDLGWERLESFGSTKPSLGVKGVFPEIGIHDFVSQLSSYYQAPVLA
KALGGKESISSAALISGGAYKEISEAKSQEVDCFITGNFDEPAWSLAHELAINFLAFGHTATEKVGPKALTQYLKQVGCD
SVVFLDTENPF

Specific function: Unknown

COG id: COG0327

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0135 (NIF3) family

Homologues:

Organism=Escherichia coli, GI1786928, Length=254, Percent_Identity=36.2204724409449, Blast_Score=145, Evalue=3e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y384_CHLMU (Q9PKS8)

Other databases:

- EMBL:   AE002160
- PIR:   B81709
- RefSeq:   NP_296762.1
- ProteinModelPortal:   Q9PKS8
- SMR:   Q9PKS8
- GeneID:   1245736
- GenomeReviews:   AE002160_GR
- KEGG:   cmu:TC0384
- TIGR:   TC_0384
- HOGENOM:   HBG554751
- OMA:   PLDVHPE
- PhylomeDB:   Q9PKS8
- ProtClustDB:   CLSK871189
- BioCyc:   CMUR243161:TC_0384-MONOMER
- InterPro:   IPR002678
- PANTHER:   PTHR13799
- TIGRFAMs:   TIGR00486

Pfam domain/function: PF01784 NIF3; SSF102705 interacting_NIF3

EC number: NA

Molecular weight: Translated: 27459; Mature: 27459

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVADLLHVLNELLYPELFNDYGPNGLQVGDAQAPVRKIAVAVTADLATIEKAIACESNV
CCHHHHHHHHHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCE
LLVHHGLFWKGMPYPITGMLYQRMQRLIENNIQLIAYHLPLDAHPEVGNNWKVAKDLGWE
EEEECCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCHHHHCCHH
RLESFGSTKPSLGVKGVFPEIGIHDFVSQLSSYYQAPVLAKALGGKESISSAALISGGAY
HHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCHHHHHCCCCH
KEISEAKSQEVDCFITGNFDEPAWSLAHELAINFLAFGHTATEKVGPKALTQYLKQVGCD
HHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHCCC
SVVFLDTENPF
EEEEEECCCCC
>Mature Secondary Structure
MNVADLLHVLNELLYPELFNDYGPNGLQVGDAQAPVRKIAVAVTADLATIEKAIACESNV
CCHHHHHHHHHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCE
LLVHHGLFWKGMPYPITGMLYQRMQRLIENNIQLIAYHLPLDAHPEVGNNWKVAKDLGWE
EEEECCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCHHHHCCHH
RLESFGSTKPSLGVKGVFPEIGIHDFVSQLSSYYQAPVLAKALGGKESISSAALISGGAY
HHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCHHHHHCCCCH
KEISEAKSQEVDCFITGNFDEPAWSLAHELAINFLAFGHTATEKVGPKALTQYLKQVGCD
HHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHCCC
SVVFLDTENPF
EEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10684935