| Definition | Chlamydia muridarum Nigg, complete genome. |
|---|---|
| Accession | NC_002620 |
| Length | 1,072,950 |
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The map label for this gene is trxB
Identifier: 15834994
GI number: 15834994
Start: 437104
End: 438042
Strand: Direct
Name: trxB
Synonym: TC0375
Alternate gene names: 15834994
Gene position: 437104-438042 (Clockwise)
Preceding gene: 15834993
Following gene: 15834995
Centisome position: 40.74
GC content: 42.6
Gene sequence:
>939_bases ATGACACATGTAAAGTTAGCCATTATAGGCTCTGGGCCTGCAGGTTACACGGCTGCTATCTATGCTTCTAGAGCGCTTTT GACCCCAATACTATTTGAAGGATTCTTTTCTGGTATCGCTGGAGGCCAATTAATGACTACGACTGAAGTGGAAAATTTTC CGGGGTTCCCTCAAGGGGTGTTGGGTCATCAGCTCATGGAAAATATGAAAATGCAAGCCCAGCGTTTTGGCACGCAGGTG ATTGCTAAAGACATCACTTCTGTAGATTTCAGTGTTAGACCTTTTGTTCTGAAATCCGGAGAAGATACTTTTACATGTGA CGCGTGCATTATAGCTACAGGGGCTTCGGCCAAGAGATTATCTATTCCAGGTGCAGGGGATAATGAATTTTGGCAAAAAG GTGTGACAGCATGTGCAGTTTGCGATGGAGCTTCCCCCATTTTTAGAGATCGGGATTTATTTGTTATTGGAGGGGGAGAT TCTGCTTTGGAAGAGGCCATGTTTTTGACTCGTTATGGTAAGCGTGTATTCGTTGTGCATAGAAGGGATACTTTGCGTGC TTCAAAGGCTATGGTGAATAAGGCTCAAGCTAATGAGAAAATTGTTTTTCTCTGGAATAGTGAAGTAGTAAAAATATTGG GGGATTCTTTGGTTCGTTCCATTGATATTTTTAATAATGTCGAGAAGACTACTGTAACAATGGAAGCCGCTGGAGTTTTC TTTGCTATTGGGCATCAGCCCAATACAGCATTCTTAGGGGGGCAGTTGTCCTTAGATGAGAATGGATATATTATTACAGA GAAGGGAAGTTCTCGAACATCGGTTCCCGGAGTTTTTGCTGCAGGAGATGTTCAAGACAAGTATTATAGACAAGCCATTA CTTCCGCAGGTAGCGGGTGTATGGCGGCTTTAGATGCTGAAAGATTTTTAGAAAAATAA
Upstream 100 bases:
>100_bases AGTTTGGTTAGTTATAGTTCCTTTTTGCAAAATCAAGAAGACTTTTCCCTATATATTTGCAGCTCTTTTATCCTTATCTA AGTTTGTATCAGGAGTTCCC
Downstream 100 bases:
>100_bases GTTTTATGTTTGGGATAGGGACTGACATTATAGAAATTGATAGGATTCGCAGAGCTTATCACACTTATGGGGATCGATTC CTAAACAAAATTTTTACGAA
Product: thioredoxin reductase
Products: NA
Alternate protein names: TRXR
Number of amino acids: Translated: 312; Mature: 311
Protein sequence:
>312_residues MTHVKLAIIGSGPAGYTAAIYASRALLTPILFEGFFSGIAGGQLMTTTEVENFPGFPQGVLGHQLMENMKMQAQRFGTQV IAKDITSVDFSVRPFVLKSGEDTFTCDACIIATGASAKRLSIPGAGDNEFWQKGVTACAVCDGASPIFRDRDLFVIGGGD SALEEAMFLTRYGKRVFVVHRRDTLRASKAMVNKAQANEKIVFLWNSEVVKILGDSLVRSIDIFNNVEKTTVTMEAAGVF FAIGHQPNTAFLGGQLSLDENGYIITEKGSSRTSVPGVFAAGDVQDKYYRQAITSAGSGCMAALDAERFLEK
Sequences:
>Translated_312_residues MTHVKLAIIGSGPAGYTAAIYASRALLTPILFEGFFSGIAGGQLMTTTEVENFPGFPQGVLGHQLMENMKMQAQRFGTQV IAKDITSVDFSVRPFVLKSGEDTFTCDACIIATGASAKRLSIPGAGDNEFWQKGVTACAVCDGASPIFRDRDLFVIGGGD SALEEAMFLTRYGKRVFVVHRRDTLRASKAMVNKAQANEKIVFLWNSEVVKILGDSLVRSIDIFNNVEKTTVTMEAAGVF FAIGHQPNTAFLGGQLSLDENGYIITEKGSSRTSVPGVFAAGDVQDKYYRQAITSAGSGCMAALDAERFLEK >Mature_311_residues THVKLAIIGSGPAGYTAAIYASRALLTPILFEGFFSGIAGGQLMTTTEVENFPGFPQGVLGHQLMENMKMQAQRFGTQVI AKDITSVDFSVRPFVLKSGEDTFTCDACIIATGASAKRLSIPGAGDNEFWQKGVTACAVCDGASPIFRDRDLFVIGGGDS ALEEAMFLTRYGKRVFVVHRRDTLRASKAMVNKAQANEKIVFLWNSEVVKILGDSLVRSIDIFNNVEKTTVTMEAAGVFF AIGHQPNTAFLGGQLSLDENGYIITEKGSSRTSVPGVFAAGDVQDKYYRQAITSAGSGCMAALDAERFLEK
Specific function: Unknown
COG id: COG0492
COG function: function code O; Thioredoxin reductase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
Homologues:
Organism=Escherichia coli, GI1787114, Length=322, Percent_Identity=49.0683229813665, Blast_Score=287, Evalue=7e-79, Organism=Escherichia coli, GI87081763, Length=299, Percent_Identity=29.7658862876254, Blast_Score=122, Evalue=3e-29, Organism=Saccharomyces cerevisiae, GI6320560, Length=317, Percent_Identity=56.1514195583596, Blast_Score=353, Evalue=2e-98, Organism=Saccharomyces cerevisiae, GI6321898, Length=317, Percent_Identity=52.9968454258675, Blast_Score=331, Evalue=7e-92,
Paralogues:
None
Copy number: 808 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): TRXB_CHLMU (Q9PKT7)
Other databases:
- EMBL: AE002160 - PIR: C81710 - RefSeq: NP_296753.1 - ProteinModelPortal: Q9PKT7 - GeneID: 1245727 - GenomeReviews: AE002160_GR - KEGG: cmu:TC0375 - TIGR: TC_0375 - HOGENOM: HBG669726 - OMA: PSCGPCH - PhylomeDB: Q9PKT7 - ProtClustDB: CLSK871182 - BioCyc: CMUR243161:TC_0375-MONOMER - BRENDA: 1.8.1.9 - GO: GO:0005737 - InterPro: IPR013027 - InterPro: IPR008255 - InterPro: IPR001327 - InterPro: IPR000103 - InterPro: IPR005982 - PRINTS: PR00368 - PRINTS: PR00469 - TIGRFAMs: TIGR01292
Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2
EC number: =1.8.1.9
Molecular weight: Translated: 33557; Mature: 33426
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: PS00573 PYRIDINE_REDOX_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHVKLAIIGSGPAGYTAAIYASRALLTPILFEGFFSGIAGGQLMTTTEVENFPGFPQGV CCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHH LGHQLMENMKMQAQRFGTQVIAKDITSVDFSVRPFVLKSGEDTFTCDACIIATGASAKRL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCEEEECCCCCEEECEEEEECCCCCCEE SIPGAGDNEFWQKGVTACAVCDGASPIFRDRDLFVIGGGDSALEEAMFLTRYGKRVFVVH ECCCCCCHHHHHHCCCEEEEECCCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCEEEEEE RRDTLRASKAMVNKAQANEKIVFLWNSEVVKILGDSLVRSIDIFNNVEKTTVTMEAAGVF CCHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECEEE FAIGHQPNTAFLGGQLSLDENGYIITEKGSSRTSVPGVFAAGDVQDKYYRQAITSAGSGC EEECCCCCCEEECCEEEECCCCEEEEECCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCC MAALDAERFLEK EEHHHHHHHHCC >Mature Secondary Structure THVKLAIIGSGPAGYTAAIYASRALLTPILFEGFFSGIAGGQLMTTTEVENFPGFPQGV CEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHH LGHQLMENMKMQAQRFGTQVIAKDITSVDFSVRPFVLKSGEDTFTCDACIIATGASAKRL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCEEEECCCCCEEECEEEEECCCCCCEE SIPGAGDNEFWQKGVTACAVCDGASPIFRDRDLFVIGGGDSALEEAMFLTRYGKRVFVVH ECCCCCCHHHHHHCCCEEEEECCCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCEEEEEE RRDTLRASKAMVNKAQANEKIVFLWNSEVVKILGDSLVRSIDIFNNVEKTTVTMEAAGVF CCHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECEEE FAIGHQPNTAFLGGQLSLDENGYIITEKGSSRTSVPGVFAAGDVQDKYYRQAITSAGSGC EEECCCCCCEEECCEEEECCCCEEEEECCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCC MAALDAERFLEK EEHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10684935