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The map label for this gene is rbfA

Identifier: 15834989

GI number: 15834989

Start: 430572

End: 430973

Strand: Reverse

Name: rbfA

Synonym: TC0370

Alternate gene names: 15834989

Gene position: 430973-430572 (Counterclockwise)

Preceding gene: 15834990

Following gene: 15834987

Centisome position: 40.17

GC content: 36.82

Gene sequence:

>402_bases
ATGACTGAAAACAGACGGATGAAAAAAGTAAATGCAATGTTGAGAGAATCCATTGCAAAAGTCATTTTGAAGGATGTAAA
GCACCCCAAAATTTCGAACCGTTGGATCACAATAACACGAGTATCTTTGTCAAGAGACTTGCAATCTGCTCGTGTTTACG
TGTCCATTATGCCGCATGAGAATTCTCAAGAAGAAACTCTTGCGGCATTGAAAGCCTCTGCGGGATTTATTGCTTGTCAA
GCTTCTAAAGACGTAGTTCTAAAGTACTTTCCAGACTTGAATTTCTATATGGAAGATATTTTTTCTCCCCAAGACCATAT
AGAAAGTCTTCTTCTGAAAATAGCTGAACAAGATAAAAAATTAACCCATAACAACAACAATTCTTCTGAACTCCACGATT
AA

Upstream 100 bases:

>100_bases
GGAATGTGGTATTCTATTAGATAACTACCAACAAGCACAAATTGGCGATACATTGCAGTGCTACGAGGTCATTTATCACC
CACAAAAATTGTAGGCTAAC

Downstream 100 bases:

>100_bases
AATATTATGGAACTTGCGACAGAACCTATTGAAGGCGTTTTGCTGGTAGATAAACCACAAGGGAGGACTTCGTTTAGTCT
TATTCGTTCTCTTGTTAGGT

Product: ribosome-binding factor A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 133; Mature: 132

Protein sequence:

>133_residues
MTENRRMKKVNAMLRESIAKVILKDVKHPKISNRWITITRVSLSRDLQSARVYVSIMPHENSQEETLAALKASAGFIACQ
ASKDVVLKYFPDLNFYMEDIFSPQDHIESLLLKIAEQDKKLTHNNNNSSELHD

Sequences:

>Translated_133_residues
MTENRRMKKVNAMLRESIAKVILKDVKHPKISNRWITITRVSLSRDLQSARVYVSIMPHENSQEETLAALKASAGFIACQ
ASKDVVLKYFPDLNFYMEDIFSPQDHIESLLLKIAEQDKKLTHNNNNSSELHD
>Mature_132_residues
TENRRMKKVNAMLRESIAKVILKDVKHPKISNRWITITRVSLSRDLQSARVYVSIMPHENSQEETLAALKASAGFIACQA
SKDVVLKYFPDLNFYMEDIFSPQDHIESLLLKIAEQDKKLTHNNNNSSELHD

Specific function: Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Essential for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA

COG id: COG0858

COG function: function code J; Ribosome-binding factor A

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rbfA family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RBFA_CHLMU (Q9PKU1)

Other databases:

- EMBL:   AE002160
- RefSeq:   NP_296748.1
- ProteinModelPortal:   Q9PKU1
- GeneID:   1245722
- GenomeReviews:   AE002160_GR
- KEGG:   cmu:TC0370
- TIGR:   TC_0370
- HOGENOM:   HBG751055
- OMA:   APEIRFY
- PhylomeDB:   Q9PKU1
- ProtClustDB:   PRK00521
- BioCyc:   CMUR243161:TC_0370-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00003
- InterPro:   IPR015946
- InterPro:   IPR000238
- Gene3D:   G3DSA:3.30.300.20
- ProDom:   PD007327
- TIGRFAMs:   TIGR00082

Pfam domain/function: PF02033 RBFA; SSF89919 Rib_bd_factA

EC number: NA

Molecular weight: Translated: 15299; Mature: 15168

Theoretical pI: Translated: 9.07; Mature: 9.07

Prosite motif: PS01319 RBFA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTENRRMKKVNAMLRESIAKVILKDVKHPKISNRWITITRVSLSRDLQSARVYVSIMPHE
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEHHHHCHHCCEEEEEEECCC
NSQEETLAALKASAGFIACQASKDVVLKYFPDLNFYMEDIFSPQDHIESLLLKIAEQDKK
CCHHHHHHHHHHCCCEEEEECCCCEEEEECCCCHHHHHHHCCCHHHHHHHHHHHHHHHHH
LTHNNNNSSELHD
HCCCCCCCCCCCC
>Mature Secondary Structure 
TENRRMKKVNAMLRESIAKVILKDVKHPKISNRWITITRVSLSRDLQSARVYVSIMPHE
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEHHHHCHHCCEEEEEEECCC
NSQEETLAALKASAGFIACQASKDVVLKYFPDLNFYMEDIFSPQDHIESLLLKIAEQDKK
CCHHHHHHHHHHCCCEEEEECCCCEEEEECCCCHHHHHHHCCCHHHHHHHHHHHHHHHHH
LTHNNNNSSELHD
HCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10684935