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The map label for this gene is ribF

Identifier: 15834987

GI number: 15834987

Start: 428987

End: 429874

Strand: Reverse

Name: ribF

Synonym: TC0368

Alternate gene names: 15834987

Gene position: 429874-428987 (Counterclockwise)

Preceding gene: 15834989

Following gene: 15834985

Centisome position: 40.06

GC content: 39.3

Gene sequence:

>888_bases
ATGGACTTATCCTACAGCCTACTCCCGTCCTCTGATCCTATAGAATCTATTACGATAGGCTTTTTTGATGGATGTCATTT
AGGACATCAAGCATTGCTTTCTTCCTTGAAACAATTTCCAGGAAAATCTGGTGTCATTACATTTAGCGAGCATCCTAAAC
ACACTTTATCGAACTCTCCTCCAGAAACTATTACTTCTCTTGAAGAGCGCATTCAGTTGCTAACGAATTGTCACATTGAT
TATCTAGCAATTCTTCCTTTTAACCAAGAGATAGCCAATGAAGAGGCTGAAATGTTTATTCTATCTCTTTATGAGTCGCT
ACATCCATCAAGAATTATCTTTGGGTATGATTCTCGATTAGGAAGGGGTGGTCTTGGAAATGCACAAACATTAAAGCCTT
TTGCTTCTTCTTTAGGGATATCATTAGAAGAAATCCCTCCCTTAAGCATCAACGGAACCATTGTATCCAGTAGAAAAATT
CGTCAATTTCTTCGAGAAGGGGACCTTCTTTCCGCAGAAAAATTTCTAGGCCGACCTTTTTCTTATACCGGAACAGTCAC
TCGAGGCCAAGGAATAGGTTCTTCTTTAGGATACGCTACTATTAATCTTAATCTTACTCGTTCCCTTTTACCTTTAGGAG
TCTACAGCTGCTCCATAAAAATTGGGCGTGAAAGCTATTTAGGAGTAATGAATCTAGGTATGGCACCTACCGTACAGAGA
AACCAACTTTGTCTAGAAGCGCACATTCTCGACCTTTCAGCTGATCTTTACGAACAGCGAGTTACTGTCATCCCTAAGCA
GTTCCTTAGAGAAGAAAAAACTTTTTCTTCTCAAAAGGAACTTGCTCTTGCTATTCAAGAGGATATACGCAAAGCTCGTT
TAAGTTAA

Upstream 100 bases:

>100_bases
CGCCGATTACGCAGCGGAAATTTTTCTATTGATCAGTGTATCGATGGAAATCATCTGGATGAACCTGGGTTTGATGTGTT
TCCTCACTTACGTGATGCAA

Downstream 100 bases:

>100_bases
AAAAGCCACATCCCCTTTTAGTTATGCAGAAACAGCATGATATCTCCGTCCTGAACAATATAGTCCCGACCCTCTGCTCG
TAATTTACCTGCTTCTCGAG

Product: bifunctional riboflavin kinase/FMN adenylyltransferase

Products: NA

Alternate protein names: Riboflavin kinase; Flavokinase; FMN adenylyltransferase; FAD pyrophosphorylase; FAD synthase [H]

Number of amino acids: Translated: 295; Mature: 295

Protein sequence:

>295_residues
MDLSYSLLPSSDPIESITIGFFDGCHLGHQALLSSLKQFPGKSGVITFSEHPKHTLSNSPPETITSLEERIQLLTNCHID
YLAILPFNQEIANEEAEMFILSLYESLHPSRIIFGYDSRLGRGGLGNAQTLKPFASSLGISLEEIPPLSINGTIVSSRKI
RQFLREGDLLSAEKFLGRPFSYTGTVTRGQGIGSSLGYATINLNLTRSLLPLGVYSCSIKIGRESYLGVMNLGMAPTVQR
NQLCLEAHILDLSADLYEQRVTVIPKQFLREEKTFSSQKELALAIQEDIRKARLS

Sequences:

>Translated_295_residues
MDLSYSLLPSSDPIESITIGFFDGCHLGHQALLSSLKQFPGKSGVITFSEHPKHTLSNSPPETITSLEERIQLLTNCHID
YLAILPFNQEIANEEAEMFILSLYESLHPSRIIFGYDSRLGRGGLGNAQTLKPFASSLGISLEEIPPLSINGTIVSSRKI
RQFLREGDLLSAEKFLGRPFSYTGTVTRGQGIGSSLGYATINLNLTRSLLPLGVYSCSIKIGRESYLGVMNLGMAPTVQR
NQLCLEAHILDLSADLYEQRVTVIPKQFLREEKTFSSQKELALAIQEDIRKARLS
>Mature_295_residues
MDLSYSLLPSSDPIESITIGFFDGCHLGHQALLSSLKQFPGKSGVITFSEHPKHTLSNSPPETITSLEERIQLLTNCHID
YLAILPFNQEIANEEAEMFILSLYESLHPSRIIFGYDSRLGRGGLGNAQTLKPFASSLGISLEEIPPLSINGTIVSSRKI
RQFLREGDLLSAEKFLGRPFSYTGTVTRGQGIGSSLGYATINLNLTRSLLPLGVYSCSIKIGRESYLGVMNLGMAPTVQR
NQLCLEAHILDLSADLYEQRVTVIPKQFLREEKTFSSQKELALAIQEDIRKARLS

Specific function: Unknown

COG id: COG0196

COG function: function code H; FAD synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribF family [H]

Homologues:

Organism=Escherichia coli, GI1786208, Length=285, Percent_Identity=32.6315789473684, Blast_Score=144, Evalue=5e-36,
Organism=Caenorhabditis elegans, GI17541882, Length=122, Percent_Identity=36.0655737704918, Blast_Score=70, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015864
- InterPro:   IPR015865
- InterPro:   IPR002606
- InterPro:   IPR014729 [H]

Pfam domain/function: PF06574 FAD_syn; PF01687 Flavokinase [H]

EC number: =2.7.1.26; =2.7.7.2 [H]

Molecular weight: Translated: 32591; Mature: 32591

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLSYSLLPSSDPIESITIGFFDGCHLGHQALLSSLKQFPGKSGVITFSEHPKHTLSNSP
CCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCCEEEECCCCCHHCCCCC
PETITSLEERIQLLTNCHIDYLAILPFNQEIANEEAEMFILSLYESLHPSRIIFGYDSRL
HHHHHHHHHHHHHHHHCCEEEEEEECCCHHHCCHHHHHHHHHHHHHCCCCEEEEECCCCC
GRGGLGNAQTLKPFASSLGISLEEIPPLSINGTIVSSRKIRQFLREGDLLSAEKFLGRPF
CCCCCCCCHHHHHHHHHHCCCHHHCCCCCCCCEEECHHHHHHHHHCCCCCCHHHHHCCCC
SYTGTVTRGQGIGSSLGYATINLNLTRSLLPLGVYSCSIKIGRESYLGVMNLGMAPTVQR
CCCCCEECCCCCCCCCCEEEEEEEEHHHHHHHCEEEEEEEECCHHHHHHHHCCCCCCCCC
NQLCLEAHILDLSADLYEQRVTVIPKQFLREEKTFSSQKELALAIQEDIRKARLS
CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDLSYSLLPSSDPIESITIGFFDGCHLGHQALLSSLKQFPGKSGVITFSEHPKHTLSNSP
CCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCCEEEECCCCCHHCCCCC
PETITSLEERIQLLTNCHIDYLAILPFNQEIANEEAEMFILSLYESLHPSRIIFGYDSRL
HHHHHHHHHHHHHHHHCCEEEEEEECCCHHHCCHHHHHHHHHHHHHCCCCEEEEECCCCC
GRGGLGNAQTLKPFASSLGISLEEIPPLSINGTIVSSRKIRQFLREGDLLSAEKFLGRPF
CCCCCCCCHHHHHHHHHHCCCHHHCCCCCCCCEEECHHHHHHHHHCCCCCCHHHHHCCCC
SYTGTVTRGQGIGSSLGYATINLNLTRSLLPLGVYSCSIKIGRESYLGVMNLGMAPTVQR
CCCCCEECCCCCCCCCCEEEEEEEEHHHHHHHCEEEEEEEECCHHHHHHHHCCCCCCCCC
NQLCLEAHILDLSADLYEQRVTVIPKQFLREEKTFSSQKELALAIQEDIRKARLS
CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12089438 [H]