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The map label for this gene is sctW

Identifier: 15834983

GI number: 15834983

Start: 423126

End: 424382

Strand: Reverse

Name: sctW

Synonym: TC0364

Alternate gene names: NA

Gene position: 424382-423126 (Counterclockwise)

Preceding gene: 15834984

Following gene: 15834982

Centisome position: 39.55

GC content: 42.24

Gene sequence:

>1257_bases
ATGACTGCATCCGGAGGAGCTGGAGGGTTAGGCGGAACCCAAACAGTAAACGTAGCACAAGCGCAAGCTGCAGCAGCTAC
TCAGGATGCACAAGAAATCATAGGCTCTCAGGAAGCTTCTGAAGCCAGTTTGATTAAAGGAAGTGAGGATCTTGCTAATC
CTGCTGCAGCGACTAGAATCAAAAAGAAAGAAGACAAATTTCAGTCATTAGAAGCTCGTCGAAAAACAACTAGTAAATCC
GAAAAAAAATCAGAAAGTACAGAAGAGAAATCAGACTCTTCTCTTGAAGAGCGCTTCACAGAAAATCTTTCGGATGTTTC
TGGAGAAGATTTTCGAGGGTTAAAGGATTCTCTGAGTGAAGATTCCTCTCCTGAAGAGATTCTTGAGAAGCTGTCAGGCA
AATTTTCGGACCCCACAATTAAAGATCTTGCTCTAGACTTTCTGATTCAATCGAGTCCTCCTGATGGGAAATTAAGAGCC
TCTCTTATTCAGGCAAAACAGACGCTTTTTCAACAAAATCCTCAAGCAGTCAAAGGAGGGCGCAACGTTCTTTTAGCATC
AGAAGCCTTTGCTTCTAAAGCAAACACTTCCCCTGCATCATTACGCGCATTGTATACCCAAGTAACCTCATCTCCGGCTA
ATTGTGCTTCTCTAAGTCAGATGCTATCCTCTTATTCTCCTACAGAAAAAGCAGCTGTTATAGATTTTTTAACAAATGGT
ATGGTGTCTGATCTCAAATCAGGAGGGCCTTCCATCCCTGCTCCACAATTGCAAGTGTATATGACGGAGCTCAGCAATCT
ACAAGCCCTCAACTCTGTAGACAGTTTTTTTGACAAAAATACAAAAGGACTAGAAGACAATTTAAAAGCCGAAGGACATA
CCCTTCCACCATCCCTAACTCCCAGTAATCTTGCTCAAACTTTTTTAAAGTTAGTGGAAGATAAGTTCCCGTCCTCCCAA
AAAGCTCAAAAATTGTTGGATGGCCTTGTTGGTTCTGACGTTACTCCTCAAACTGAAGTTTTAAATCTCTTTTACCGAGC
GCTCAATGGTTGTTCCCCACGAATATTCGGCAATGCTGAGAAAAAACAGCAGCTAGCAACAGTAATTACTAACACATTAG
ATACCGTGAATGCCGATAACGAAGATTATCCTAAACCTAGCGATTTCCCCAAACCTTCCTTCCATGGCACTCCTCCTCAT
GCTCCAGTGTCTCTATCTGATATTCCATCAGCAACAACAAACTCTGCAGACCAATAA

Upstream 100 bases:

>100_bases
TTCCTGATATTGCTGTGATTTCTTATCAAGAGGTCTTACCTGAAATTAGAATCCAGCCTTTAGGAAGAATTCAAATTTTC
TAACCGTGAGGTAAGAAGAG

Downstream 100 bases:

>100_bases
TAGAAATAATCCCAGAAAAGAACGCTTCCTATTATGCAAAATCAATTCGAACAACTCCTTACAGAACTTAGTGCCCAACT
TAATAGTCCACTCTCTCCAG

Product: type III secreted protein SctW

Products: NA

Alternate protein names: Low Calcium Response E; CopN Protein; Low Calcium Response Protein E

Number of amino acids: Translated: 418; Mature: 417

Protein sequence:

>418_residues
MTASGGAGGLGGTQTVNVAQAQAAAATQDAQEIIGSQEASEASLIKGSEDLANPAAATRIKKKEDKFQSLEARRKTTSKS
EKKSESTEEKSDSSLEERFTENLSDVSGEDFRGLKDSLSEDSSPEEILEKLSGKFSDPTIKDLALDFLIQSSPPDGKLRA
SLIQAKQTLFQQNPQAVKGGRNVLLASEAFASKANTSPASLRALYTQVTSSPANCASLSQMLSSYSPTEKAAVIDFLTNG
MVSDLKSGGPSIPAPQLQVYMTELSNLQALNSVDSFFDKNTKGLEDNLKAEGHTLPPSLTPSNLAQTFLKLVEDKFPSSQ
KAQKLLDGLVGSDVTPQTEVLNLFYRALNGCSPRIFGNAEKKQQLATVITNTLDTVNADNEDYPKPSDFPKPSFHGTPPH
APVSLSDIPSATTNSADQ

Sequences:

>Translated_418_residues
MTASGGAGGLGGTQTVNVAQAQAAAATQDAQEIIGSQEASEASLIKGSEDLANPAAATRIKKKEDKFQSLEARRKTTSKS
EKKSESTEEKSDSSLEERFTENLSDVSGEDFRGLKDSLSEDSSPEEILEKLSGKFSDPTIKDLALDFLIQSSPPDGKLRA
SLIQAKQTLFQQNPQAVKGGRNVLLASEAFASKANTSPASLRALYTQVTSSPANCASLSQMLSSYSPTEKAAVIDFLTNG
MVSDLKSGGPSIPAPQLQVYMTELSNLQALNSVDSFFDKNTKGLEDNLKAEGHTLPPSLTPSNLAQTFLKLVEDKFPSSQ
KAQKLLDGLVGSDVTPQTEVLNLFYRALNGCSPRIFGNAEKKQQLATVITNTLDTVNADNEDYPKPSDFPKPSFHGTPPH
APVSLSDIPSATTNSADQ
>Mature_417_residues
TASGGAGGLGGTQTVNVAQAQAAAATQDAQEIIGSQEASEASLIKGSEDLANPAAATRIKKKEDKFQSLEARRKTTSKSE
KKSESTEEKSDSSLEERFTENLSDVSGEDFRGLKDSLSEDSSPEEILEKLSGKFSDPTIKDLALDFLIQSSPPDGKLRAS
LIQAKQTLFQQNPQAVKGGRNVLLASEAFASKANTSPASLRALYTQVTSSPANCASLSQMLSSYSPTEKAAVIDFLTNGM
VSDLKSGGPSIPAPQLQVYMTELSNLQALNSVDSFFDKNTKGLEDNLKAEGHTLPPSLTPSNLAQTFLKLVEDKFPSSQK
AQKLLDGLVGSDVTPQTEVLNLFYRALNGCSPRIFGNAEKKQQLATVITNTLDTVNADNEDYPKPSDFPKPSFHGTPPHA
PVSLSDIPSATTNSADQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44494; Mature: 44362

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTASGGAGGLGGTQTVNVAQAQAAAATQDAQEIIGSQEASEASLIKGSEDLANPAAATRI
CCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHCCHHHHHHH
KKKEDKFQSLEARRKTTSKSEKKSESTEEKSDSSLEERFTENLSDVSGEDFRGLKDSLSE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCC
DSSPEEILEKLSGKFSDPTIKDLALDFLIQSSPPDGKLRASLIQAKQTLFQQNPQAVKGG
CCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHCC
RNVLLASEAFASKANTSPASLRALYTQVTSSPANCASLSQMLSSYSPTEKAAVIDFLTNG
CCEEEEHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHH
MVSDLKSGGPSIPAPQLQVYMTELSNLQALNSVDSFFDKNTKGLEDNLKAEGHTLPPSLT
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCC
PSNLAQTFLKLVEDKFPSSQKAQKLLDGLVGSDVTPQTEVLNLFYRALNGCSPRIFGNAE
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCHH
KKQQLATVITNTLDTVNADNEDYPKPSDFPKPSFHGTPPHAPVSLSDIPSATTNSADQ
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCC
>Mature Secondary Structure 
TASGGAGGLGGTQTVNVAQAQAAAATQDAQEIIGSQEASEASLIKGSEDLANPAAATRI
CCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHCCHHHHHHH
KKKEDKFQSLEARRKTTSKSEKKSESTEEKSDSSLEERFTENLSDVSGEDFRGLKDSLSE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCC
DSSPEEILEKLSGKFSDPTIKDLALDFLIQSSPPDGKLRASLIQAKQTLFQQNPQAVKGG
CCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHCC
RNVLLASEAFASKANTSPASLRALYTQVTSSPANCASLSQMLSSYSPTEKAAVIDFLTNG
CCEEEEHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHH
MVSDLKSGGPSIPAPQLQVYMTELSNLQALNSVDSFFDKNTKGLEDNLKAEGHTLPPSLT
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCC
PSNLAQTFLKLVEDKFPSSQKAQKLLDGLVGSDVTPQTEVLNLFYRALNGCSPRIFGNAE
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCHH
KKQQLATVITNTLDTVNADNEDYPKPSDFPKPSFHGTPPHAPVSLSDIPSATTNSADQ
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA