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The map label for this gene is sycE

Identifier: 15834982

GI number: 15834982

Start: 422652

End: 423092

Strand: Reverse

Name: sycE

Synonym: TC0363

Alternate gene names: NA

Gene position: 423092-422652 (Counterclockwise)

Preceding gene: 15834983

Following gene: 15834981

Centisome position: 39.43

GC content: 37.87

Gene sequence:

>441_bases
ATGCAAAATCAATTCGAACAACTCCTTACAGAACTTAGTGCCCAACTTAATAGTCCACTCTCTCCAGATGAAAATAATGC
CTGTGTCGTCCGATTTGGCTATAATGACGTTGCTGTACAAATTGAAGAAGATGGAAATTCAGGATTTTTAGTTGCAGGAG
TTGTTCTCGGTAAACTTCCTGAAAATACTTTTAGACAAAAGGTATTTAGAGCTGCTTTATCTATTAATGGTTCCCCTCAA
TCTAATATTAAAGGCACCCTGGCTTATGGCGAGATTTCGAATCAATTATATCTGTGCGACCGAATCAATATGACCTATCT
AAACGGAGAAAAATTATCTCGTTACTTGGTACTTTTTTCTCAACATGCCAAAATTTGGATTCAAGCTCTTGTAAAAGGAG
AACTCCCAGATCTACATGCTCTGGGGATGTATCACCTGTAG

Upstream 100 bases:

>100_bases
TCCTCCTCATGCTCCAGTGTCTCTATCTGATATTCCATCAGCAACAACAAACTCTGCAGACCAATAATAGAAATAATCCC
AGAAAAGAACGCTTCCTATT

Downstream 100 bases:

>100_bases
ACCTATGCCATTATTATCCCGATCCTTACGTATCATCCAAAACTCTCCTATTCGAAAAGTTTGGAATCAAGTCGATACTT
CCCCAAAACACGGGATTTGT

Product: type III secretion chaperone SycE

Products: NA

Alternate protein names: Secretion Chaperone; Chaperone For Secretion

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MQNQFEQLLTELSAQLNSPLSPDENNACVVRFGYNDVAVQIEEDGNSGFLVAGVVLGKLPENTFRQKVFRAALSINGSPQ
SNIKGTLAYGEISNQLYLCDRINMTYLNGEKLSRYLVLFSQHAKIWIQALVKGELPDLHALGMYHL

Sequences:

>Translated_146_residues
MQNQFEQLLTELSAQLNSPLSPDENNACVVRFGYNDVAVQIEEDGNSGFLVAGVVLGKLPENTFRQKVFRAALSINGSPQ
SNIKGTLAYGEISNQLYLCDRINMTYLNGEKLSRYLVLFSQHAKIWIQALVKGELPDLHALGMYHL
>Mature_146_residues
MQNQFEQLLTELSAQLNSPLSPDENNACVVRFGYNDVAVQIEEDGNSGFLVAGVVLGKLPENTFRQKVFRAALSINGSPQ
SNIKGTLAYGEISNQLYLCDRINMTYLNGEKLSRYLVLFSQHAKIWIQALVKGELPDLHALGMYHL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16275; Mature: 16275

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNQFEQLLTELSAQLNSPLSPDENNACVVRFGYNDVAVQIEEDGNSGFLVAGVVLGKLP
CCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCEEEEEEEECCCCCEEEEEEHHCCCC
ENTFRQKVFRAALSINGSPQSNIKGTLAYGEISNQLYLCDRINMTYLNGEKLSRYLVLFS
CHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCEEEEEECCCEEEECHHHHHHHHHHHH
QHAKIWIQALVKGELPDLHALGMYHL
HHHHHHHHHHHCCCCCCCCCCCEECC
>Mature Secondary Structure
MQNQFEQLLTELSAQLNSPLSPDENNACVVRFGYNDVAVQIEEDGNSGFLVAGVVLGKLP
CCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCEEEEEEEECCCCCEEEEEEHHCCCC
ENTFRQKVFRAALSINGSPQSNIKGTLAYGEISNQLYLCDRINMTYLNGEKLSRYLVLFS
CHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCEEEEEECCCEEEECHHHHHHHHHHHH
QHAKIWIQALVKGELPDLHALGMYHL
HHHHHHHHHHHCCCCCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA