| Definition | Chlamydia muridarum Nigg, complete genome. |
|---|---|
| Accession | NC_002620 |
| Length | 1,072,950 |
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Identifier: 15834974
GI number: 15834974
Start: 415387
End: 417063
Strand: Direct
Name: Not Available
Synonym: TC0355
Alternate gene names: NA
Gene position: 415387-417063 (Clockwise)
Preceding gene: 15834973
Following gene: 15834975
Centisome position: 38.71
GC content: 43.41
Gene sequence:
>1677_bases ATGTCTGTTTTTGGAAGTGGTAGCATATCTCCCGCAACGCCTGATTTTGATCCTTCTATTTTTATGGGGAAACAGGCGGA ATCGGCAAACACCGCTAAAGAATCTGTCGGGGCATCGAGAGCTAAGGAGTCCTCTGCCGCAGAACAGCAAGCTGCAATAA GTTCGGGAACAGAATTAGATTATGTTACTGATTTACAGCAAAGTGAGGGAAAATACAAAAAGACTCTTGATAAAACTTCA AAATCTCCCAAAACCAAGTTAAAAGGGAATTTTTCTAAGGTACGGGCTGGCACTCAAGGGTTTTTAACAGGGTTTGGAAC TCGAGCTTCGCGTATTTCTGCACGTAGAGCTGAGGCCAATGGAGAGGGGATGTCTATGATTCCCAGCCAGATGGAATATG TTAAGAAAAAAGGAAATCGCGTTTCTCCTGAGATGCAAAATTTTTATCTCGGAGCCTCTGGATTATGGAGTCAAACGTCC CAAGTTTCTTCTATAACGGAAAAGCATTTAGGGGCTACCGCGCTATCATCGACCCCTTCATTAACGGCTTTGCATAGTCC TCTGGCTATTGAACAGCTATCAGATGGGGAGATAACAGCTTTAGCTTCTTTTAATCCTAATGCTCGGGCCTCTTATTTGG ACCCGCACACGATCAGTGCATGGACGGAAGCTCGATTGGGAGGAGAAATGATTTCTACTCTTTTAGATCCCAATATTGAG ACTTCTTCTCTTTTACGTAGAGCACCTACTGTGAGTAATGAAGGAATGATCGATGTCTCGGATATGAATAAACAGACAGA AAGTTTATCAATGGTAGGGTTAGTGAACTCAGTTGTCGACGATCCTGTCTCTGTAGTAGAAGAGAAGAAAAAGGACGAGC TTTCTTTAGAAGAGATGGCTGCTATGGCAAAAATGATGGCAGCGTTATTAAGTTCTGGGGAGGGAATGGCTTTCTTTGTA GCCTCTTCTACCTCTGGATTGGGAGTTACACAATTTCCTGAACCTAAATTTTCGGGAACGATTCCTCACAATTTTACCAA AAAGGAAACGAATCAAGATATCTGGGAAGAGAGTTCTCGGATAGGGAATCTATCTTTTAATCCGAGAGGATCGGGAAATA CAGTCTCTTTGTCGGCAACGAGTCTGCATGAAGAGGCGTCTTACAGGTTCCCCAAGGGAGATTCTCCATGGGATGTTAAC GAACTTCCTTTTGCTGTTCAACAGAGCGCCATGTTTAAGGCGCCGTATGCCAATATAGAACAAGATCTTATTCAGGATAC AAGTGTAGGAGTTGTTTCTGTTTCGGCTGATACGGTTGGACAGGATACGATCAGCTCCGCTTATCAGTTTCCTTCTCAAT TGGGAATGTCGGTGCTATCTCCGATTCCTCTTTCTACAGCTGATTATAAGGCCGTTTTAGAGCATCGTAAAGGGCCTGGT GGTCCTCCGGATCCATTAATTTATCAATACCGTAATGTGGCTGTTGATCCAGCAATTATTTTCCAATCCATTTCGCCATT TAGCGTTTCTTCGCGTTTTTCTGTACAAGGGAAACCAGAAGTATTTGCTGCGTATGATGATGATCAAGAATCCTCCGGAG GTAATAGTGGGGAAGGAGAACAAGATCAAGATCAGGACAAAGCAAATAAAACAGAAGATGCAGGAGGTGATTCGTGA
Upstream 100 bases:
>100_bases GATTTAAAACTCAATGTATTTTGTTTTGTTTTATAATTAACTGTTTCAGTTTAAAATTATTGTTACCATTCACTGGCTTT TTATTTTTTAAGGAAATAGC
Downstream 100 bases:
>100_bases GAATTATCCCTTTTGATCCTTACGGATCAATAGCTTTTCAGGGGATAACGAAAGATCCTCAAGAGAAAAAGTCTGGTAGT ATATCAGAGAAAATAGCAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 558; Mature: 557
Protein sequence:
>558_residues MSVFGSGSISPATPDFDPSIFMGKQAESANTAKESVGASRAKESSAAEQQAAISSGTELDYVTDLQQSEGKYKKTLDKTS KSPKTKLKGNFSKVRAGTQGFLTGFGTRASRISARRAEANGEGMSMIPSQMEYVKKKGNRVSPEMQNFYLGASGLWSQTS QVSSITEKHLGATALSSTPSLTALHSPLAIEQLSDGEITALASFNPNARASYLDPHTISAWTEARLGGEMISTLLDPNIE TSSLLRRAPTVSNEGMIDVSDMNKQTESLSMVGLVNSVVDDPVSVVEEKKKDELSLEEMAAMAKMMAALLSSGEGMAFFV ASSTSGLGVTQFPEPKFSGTIPHNFTKKETNQDIWEESSRIGNLSFNPRGSGNTVSLSATSLHEEASYRFPKGDSPWDVN ELPFAVQQSAMFKAPYANIEQDLIQDTSVGVVSVSADTVGQDTISSAYQFPSQLGMSVLSPIPLSTADYKAVLEHRKGPG GPPDPLIYQYRNVAVDPAIIFQSISPFSVSSRFSVQGKPEVFAAYDDDQESSGGNSGEGEQDQDQDKANKTEDAGGDS
Sequences:
>Translated_558_residues MSVFGSGSISPATPDFDPSIFMGKQAESANTAKESVGASRAKESSAAEQQAAISSGTELDYVTDLQQSEGKYKKTLDKTS KSPKTKLKGNFSKVRAGTQGFLTGFGTRASRISARRAEANGEGMSMIPSQMEYVKKKGNRVSPEMQNFYLGASGLWSQTS QVSSITEKHLGATALSSTPSLTALHSPLAIEQLSDGEITALASFNPNARASYLDPHTISAWTEARLGGEMISTLLDPNIE TSSLLRRAPTVSNEGMIDVSDMNKQTESLSMVGLVNSVVDDPVSVVEEKKKDELSLEEMAAMAKMMAALLSSGEGMAFFV ASSTSGLGVTQFPEPKFSGTIPHNFTKKETNQDIWEESSRIGNLSFNPRGSGNTVSLSATSLHEEASYRFPKGDSPWDVN ELPFAVQQSAMFKAPYANIEQDLIQDTSVGVVSVSADTVGQDTISSAYQFPSQLGMSVLSPIPLSTADYKAVLEHRKGPG GPPDPLIYQYRNVAVDPAIIFQSISPFSVSSRFSVQGKPEVFAAYDDDQESSGGNSGEGEQDQDQDKANKTEDAGGDS >Mature_557_residues SVFGSGSISPATPDFDPSIFMGKQAESANTAKESVGASRAKESSAAEQQAAISSGTELDYVTDLQQSEGKYKKTLDKTSK SPKTKLKGNFSKVRAGTQGFLTGFGTRASRISARRAEANGEGMSMIPSQMEYVKKKGNRVSPEMQNFYLGASGLWSQTSQ VSSITEKHLGATALSSTPSLTALHSPLAIEQLSDGEITALASFNPNARASYLDPHTISAWTEARLGGEMISTLLDPNIET SSLLRRAPTVSNEGMIDVSDMNKQTESLSMVGLVNSVVDDPVSVVEEKKKDELSLEEMAAMAKMMAALLSSGEGMAFFVA SSTSGLGVTQFPEPKFSGTIPHNFTKKETNQDIWEESSRIGNLSFNPRGSGNTVSLSATSLHEEASYRFPKGDSPWDVNE LPFAVQQSAMFKAPYANIEQDLIQDTSVGVVSVSADTVGQDTISSAYQFPSQLGMSVLSPIPLSTADYKAVLEHRKGPGG PPDPLIYQYRNVAVDPAIIFQSISPFSVSSRFSVQGKPEVFAAYDDDQESSGGNSGEGEQDQDQDKANKTEDAGGDS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59551; Mature: 59420
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVFGSGSISPATPDFDPSIFMGKQAESANTAKESVGASRAKESSAAEQQAAISSGTELD CCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH YVTDLQQSEGKYKKTLDKTSKSPKTKLKGNFSKVRAGTQGFLTGFGTRASRISARRAEAN HHHHHHHHCCHHHHHHHHHCCCCCHHHCCCHHHHHCCCHHHHHHCCCHHHHHHHHHHCCC GEGMSMIPSQMEYVKKKGNRVSPEMQNFYLGASGLWSQTSQVSSITEKHLGATALSSTPS CCCCHHHHHHHHHHHHCCCCCCCHHHHEEECCCCCHHHHHHHHHHHHHHCCCHHHCCCCC LTALHSPLAIEQLSDGEITALASFNPNARASYLDPHTISAWTEARLGGEMISTLLDPNIE HHHHCCCHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC TSSLLRRAPTVSNEGMIDVSDMNKQTESLSMVGLVNSVVDDPVSVVEEKKKDELSLEEMA HHHHHHHCCCCCCCCEEEHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHH AMAKMMAALLSSGEGMAFFVASSTSGLGVTQFPEPKFSGTIPHNFTKKETNQDIWEESSR HHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHH IGNLSFNPRGSGNTVSLSATSLHEEASYRFPKGDSPWDVNELPFAVQQSAMFKAPYANIE CCCCCCCCCCCCCEEEEEHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHH QDLIQDTSVGVVSVSADTVGQDTISSAYQFPSQLGMSVLSPIPLSTADYKAVLEHRKGPG HHHHHCCCCCEEEECCCCCCHHHHHHHHHCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCC GPPDPLIYQYRNVAVDPAIIFQSISPFSVSSRFSVQGKPEVFAAYDDDQESSGGNSGEGE CCCCHHHHHHHHCCCCHHHHHHCCCCCCCCCEEECCCCCCEEEEECCCCCCCCCCCCCCC QDQDQDKANKTEDAGGDS CCHHHHHHCCCCCCCCCC >Mature Secondary Structure SVFGSGSISPATPDFDPSIFMGKQAESANTAKESVGASRAKESSAAEQQAAISSGTELD CCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH YVTDLQQSEGKYKKTLDKTSKSPKTKLKGNFSKVRAGTQGFLTGFGTRASRISARRAEAN HHHHHHHHCCHHHHHHHHHCCCCCHHHCCCHHHHHCCCHHHHHHCCCHHHHHHHHHHCCC GEGMSMIPSQMEYVKKKGNRVSPEMQNFYLGASGLWSQTSQVSSITEKHLGATALSSTPS CCCCHHHHHHHHHHHHCCCCCCCHHHHEEECCCCCHHHHHHHHHHHHHHCCCHHHCCCCC LTALHSPLAIEQLSDGEITALASFNPNARASYLDPHTISAWTEARLGGEMISTLLDPNIE HHHHCCCHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC TSSLLRRAPTVSNEGMIDVSDMNKQTESLSMVGLVNSVVDDPVSVVEEKKKDELSLEEMA HHHHHHHCCCCCCCCEEEHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHH AMAKMMAALLSSGEGMAFFVASSTSGLGVTQFPEPKFSGTIPHNFTKKETNQDIWEESSR HHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHH IGNLSFNPRGSGNTVSLSATSLHEEASYRFPKGDSPWDVNELPFAVQQSAMFKAPYANIE CCCCCCCCCCCCCEEEEEHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHH QDLIQDTSVGVVSVSADTVGQDTISSAYQFPSQLGMSVLSPIPLSTADYKAVLEHRKGPG HHHHHCCCCCEEEECCCCCCHHHHHHHHHCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCC GPPDPLIYQYRNVAVDPAIIFQSISPFSVSSRFSVQGKPEVFAAYDDDQESSGGNSGEGE CCCCHHHHHHHHCCCCHHHHHHCCCCCCCCCEEECCCCCCEEEEECCCCCCCCCCCCCCC QDQDQDKANKTEDAGGDS CCHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA