Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 15834958

GI number: 15834958

Start: 400849

End: 401829

Strand: Direct

Name: Not Available

Synonym: TC0338

Alternate gene names: NA

Gene position: 400849-401829 (Clockwise)

Preceding gene: 15834953

Following gene: 15834959

Centisome position: 37.36

GC content: 39.39

Gene sequence:

>981_bases
ATGTTTTTTTTGCATGTTAGAAAATATAAGCATGTTATTGGGGGACTCTTGTGTTTAGCAGGTTGTTTTGTAATAAGTAG
CTGTTCCTCTGGCAGAGGAAACAAATCTATCGATGAAAGAATTCACATTTTGTCTATGAATCGCATGATTTATGATTGCG
TTTCGCGCATAACAGGAGATCGAGTCAAAAATATCGTTCTGATTGATGGATCTATAGATCCACATTCCTATGAGATGGTC
AAAGGTGATGAAGATAGAATGGCTATAAGCCAGCTGATTTTTTGTAATGGCTTAGGTCTGGAGCATTCAGCTAGTTTGCG
AAAACATTTGGAGGGGAACTCTAAAGTTATCGATTTGGGGGCTCGATTGTTAGATAAGAATTGTTTTGTCCTTTTAAGTG
AAGATGGGTTCCCTGATCCCCATATCTGGACAGATATGGGTGTATGGATTTCGYCTGTAAAAGAAATGGCTTCAGTGTTG
GTTCAACAAATTCCTCAGTATGCGGAAGAATTTCAAAAAAACGCGGAACAAATTCTTTCTGAAATGGAAGATCTGGACCG
CTGGGCCGTACGTTCTCTCGCTACCATTCCAGAAAAGAATCGTTATTTAGTCACGGGGCATAATGCGTTCAGCTATTTTA
CTCGACGGTACCTATCTTCTGATGAAGAAAGGGAATCTGGGAATTGGAAATTGCGTTGCATGTCTCCCGAAGGCTTGTCT
CCAGAAGCTCAAATTAGTATTCGGGATATTATGCGTGTAGTGGAGTATATATGTGCAAATGATGTGGGGGTTGTCTTCTT
AGAGGATACTTTAAACCAGGATGCTTTAAGAAAGATTGTCAGTTGCTCGAAAAGTGGGCAAAAAATTCGTTTAGCTAAGT
CTCCTTTGTATAGTGATAATGTTTGTGATAATTATTTTAACACTTTCCAGCATAATGTCCGTACCATCACGGAAGAACTA
GGAGGAACTGTTCTTGAATAG

Upstream 100 bases:

>100_bases
GGGATTGAGCGGCAGAGGACCGGTTAGTTTTTAGTGGCTTTAAAGGAAATAGCGAGGAACTTTCAGACTTAGTTTCTCGC
ATCAATGGTCAGGAGGCTCT

Downstream 100 bases:

>100_bases
GGATAATACGATTGCTTGGGCTGTAGATGATCTGTGTGTTAACTATGATCACTCAGACGTTTTATGCCATATTGCCTTTT
CTTTGCCTTCTGGGGCGATG

Product: ABC transporter, periplasmic substrate-binding protein, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 326; Mature: 326

Protein sequence:

>326_residues
MFFLHVRKYKHVIGGLLCLAGCFVISSCSSGRGNKSIDERIHILSMNRMIYDCVSRITGDRVKNIVLIDGSIDPHSYEMV
KGDEDRMAISQLIFCNGLGLEHSASLRKHLEGNSKVIDLGARLLDKNCFVLLSEDGFPDPHIWTDMGVWISXVKEMASVL
VQQIPQYAEEFQKNAEQILSEMEDLDRWAVRSLATIPEKNRYLVTGHNAFSYFTRRYLSSDEERESGNWKLRCMSPEGLS
PEAQISIRDIMRVVEYICANDVGVVFLEDTLNQDALRKIVSCSKSGQKIRLAKSPLYSDNVCDNYFNTFQHNVRTITEEL
GGTVLE

Sequences:

>Translated_326_residues
MFFLHVRKYKHVIGGLLCLAGCFVISSCSSGRGNKSIDERIHILSMNRMIYDCVSRITGDRVKNIVLIDGSIDPHSYEMV
KGDEDRMAISQLIFCNGLGLEHSASLRKHLEGNSKVIDLGARLLDKNCFVLLSEDGFPDPHIWTDMGVWISXVKEMASVL
VQQIPQYAEEFQKNAEQILSEMEDLDRWAVRSLATIPEKNRYLVTGHNAFSYFTRRYLSSDEERESGNWKLRCMSPEGLS
PEAQISIRDIMRVVEYICANDVGVVFLEDTLNQDALRKIVSCSKSGQKIRLAKSPLYSDNVCDNYFNTFQHNVRTITEEL
GGTVLE
>Mature_326_residues
MFFLHVRKYKHVIGGLLCLAGCFVISSCSSGRGNKSIDERIHILSMNRMIYDCVSRITGDRVKNIVLIDGSIDPHSYEMV
KGDEDRMAISQLIFCNGLGLEHSASLRKHLEGNSKVIDLGARLLDKNCFVLLSEDGFPDPHIWTDMGVWISXVKEMASVL
VQQIPQYAEEFQKNAEQILSEMEDLDRWAVRSLATIPEKNRYLVTGHNAFSYFTRRYLSSDEERESGNWKLRCMSPEGLS
PEAQISIRDIMRVVEYICANDVGVVFLEDTLNQDALRKIVSCSKSGQKIRLAKSPLYSDNVCDNYFNTFQHNVRTITEEL
GGTVLE

Specific function: Part of an ATP-driven transport system TC_0338/TC_0339/TC_0341/TC_0342 for a metal. Metal-binding component

COG id: COG0803

COG function: function code P; ABC-type metal ion transport system, periplasmic component/surface adhesin

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 9 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y338_CHLMU (Q9PKX2)

Other databases:

- EMBL:   AE002160
- PIR:   F81714
- RefSeq:   NP_296717.1
- GeneID:   1246382
- GenomeReviews:   AE002160_GR
- KEGG:   cmu:TC0338
- TIGR:   TC_0338
- HOGENOM:   HBG413933
- OMA:   FSDAMGA
- PhylomeDB:   Q9PKX2
- ProtClustDB:   CLSK871163
- BioCyc:   CMUR243161:TC_0338-MONOMER
- InterPro:   IPR006127
- InterPro:   IPR006129
- InterPro:   IPR006128
- PRINTS:   PR00691
- PRINTS:   PR00690

Pfam domain/function: PF01297 SBP_bac_9

EC number: NA

Molecular weight: Translated: 36930; Mature: 36930

Theoretical pI: Translated: 6.05; Mature: 6.05

Prosite motif: PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFFLHVRKYKHVIGGLLCLAGCFVISSCSSGRGNKSIDERIHILSMNRMIYDCVSRITGD
CEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
RVKNIVLIDGSIDPHSYEMVKGDEDRMAISQLIFCNGLGLEHSASLRKHLEGNSKVIDLG
HHCEEEEEECCCCCCCCHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHH
ARLLDKNCFVLLSEDGFPDPHIWTDMGVWISXVKEMASVLVQQIPQYAEEFQKNAEQILS
HHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EMEDLDRWAVRSLATIPEKNRYLVTGHNAFSYFTRRYLSSDEERESGNWKLRCMSPEGLS
HHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCC
PEAQISIRDIMRVVEYICANDVGVVFLEDTLNQDALRKIVSCSKSGQKIRLAKSPLYSDN
CCCEEEHHHHHHHHHHHHCCCCEEEEEHHHCCHHHHHHHHHHCCCCCEEEEECCCCCCCC
VCDNYFNTFQHNVRTITEELGGTVLE
HHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MFFLHVRKYKHVIGGLLCLAGCFVISSCSSGRGNKSIDERIHILSMNRMIYDCVSRITGD
CEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
RVKNIVLIDGSIDPHSYEMVKGDEDRMAISQLIFCNGLGLEHSASLRKHLEGNSKVIDLG
HHCEEEEEECCCCCCCCHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHH
ARLLDKNCFVLLSEDGFPDPHIWTDMGVWISXVKEMASVLVQQIPQYAEEFQKNAEQILS
HHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EMEDLDRWAVRSLATIPEKNRYLVTGHNAFSYFTRRYLSSDEERESGNWKLRCMSPEGLS
HHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCC
PEAQISIRDIMRVVEYICANDVGVVFLEDTLNQDALRKIVSCSKSGQKIRLAKSPLYSDN
CCCEEEHHHHHHHHHHHHCCCCEEEEEHHHCCHHHHHHHHHHCCCCCEEEEECCCCCCCC
VCDNYFNTFQHNVRTITEELGGTVLE
HHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10684935