| Definition | Chlamydia muridarum Nigg, complete genome. |
|---|---|
| Accession | NC_002620 |
| Length | 1,072,950 |
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Identifier: 15834948
GI number: 15834948
Start: 388554
End: 389678
Strand: Reverse
Name: Not Available
Synonym: TC0328
Alternate gene names: NA
Gene position: 389678-388554 (Counterclockwise)
Preceding gene: 15834949
Following gene: 15834947
Centisome position: 36.32
GC content: 40.27
Gene sequence:
>1125_bases ATGTGTACTCTGATATCCGCAATGCGGAATTTTTTACCTCCTGATTGCAAACTTCCTACTTTGACTTACAAACAGGCCCT TATTACTTCCCTCGCATCGGGGATAATTTTAGGACTTGCTGGTTGTTTGGTTGGAATCCTCTCTTCTATCACTTCTCTGA TTATCGTTTCTGGTTTTATTTTAGGAGTTAGTCTTCTCATTGCAGGGATTCTTCTTTCCCAGCGTTTTTGTTCTCAAGAC AACGTATTAAAACCTGAAATTCCAGAACAGGAAATTCCAGAGCTGGAGATCCCAGAATTTGAAATTCCTGAACTCGAGCT CCTAGAACCAAGTACCCCTCCCCCATCTTTTATCCCCCCAAAACCACCCTTACTCCCTAAACTAGCTTTAAAAAATACCA TAAAAGAAATGTTATTTGGCTGGAACAGTATAGAATCTGAAAAACTGCTTCCCTGTTTTCTTTCTTCAGACAAAATTCTT TTATCTTTTAACAACCCCTCAGCTCGATTCAGAGCATGGAATATCCCCGGATCAAATACACTATTCATTACTACCTCTGG ACAATATGCTTCCCTAAAGCTTCAATCCAATTTGCCTTCGGCAATTGCAAATTCTGTACAATCCATATCTTGCCCTAAAG GTGGACGAGGAACTAATGATTTATTTTCTGCAGTGATTACTGATAGATGCTGGGAAGAATCTAAACCAAGTTCGGGCCTC TTACTTCCAGGAGAATGCTCTTCCGCACCTTGGGAAGACAATGACGTTCAATCCCCCACTTGGAATTTTGAAACTCAAAC TTATAATAAACCCACTCGCTTTATCCAAATTTCGGCTCCTAAAGCCTCTATGTATTCCAATAGCCCTGCTTATTGTTATC AACTTTGCTTTAAAGCCTATTTGTCCTGCTTTAAAGAGGCTATCCGCCATGGCTGTCACATCATTCAAATTCCTCTCATA GCCTCTTTCCCAGACTTCCTTCCAGGCTCCCAACACAAAGAAAAAGTCTGGATCGATTCAACTAAACTAGCCTTGCTCCA TGCTATCGCAATAATTGCTCACCAACATCGATCAGATAATATAGTGATTGTTTTAACGAGCATCCCAAGACCTATTTATT TCTAA
Upstream 100 bases:
>100_bases GCTGCGTTAAGCTAACCTTTTAATCCCTAATACCCGGTTCTTGCGCAAAACGAGCCATTATCTTAAGCTCTTAAACAAAA ATTTTTAGGTTTAAGGGTTT
Downstream 100 bases:
>100_bases GATAGGGAATAAGTCCTAGGAAGGTTTGCTTGGATAAACCTTCCTATAAATCAAAAAAAGCTTACAATTATCCCTAAACT TTCTTTCTTGGGAGAGTGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 374; Mature: 374
Protein sequence:
>374_residues MCTLISAMRNFLPPDCKLPTLTYKQALITSLASGIILGLAGCLVGILSSITSLIIVSGFILGVSLLIAGILLSQRFCSQD NVLKPEIPEQEIPELEIPEFEIPELELLEPSTPPPSFIPPKPPLLPKLALKNTIKEMLFGWNSIESEKLLPCFLSSDKIL LSFNNPSARFRAWNIPGSNTLFITTSGQYASLKLQSNLPSAIANSVQSISCPKGGRGTNDLFSAVITDRCWEESKPSSGL LLPGECSSAPWEDNDVQSPTWNFETQTYNKPTRFIQISAPKASMYSNSPAYCYQLCFKAYLSCFKEAIRHGCHIIQIPLI ASFPDFLPGSQHKEKVWIDSTKLALLHAIAIIAHQHRSDNIVIVLTSIPRPIYF
Sequences:
>Translated_374_residues MCTLISAMRNFLPPDCKLPTLTYKQALITSLASGIILGLAGCLVGILSSITSLIIVSGFILGVSLLIAGILLSQRFCSQD NVLKPEIPEQEIPELEIPEFEIPELELLEPSTPPPSFIPPKPPLLPKLALKNTIKEMLFGWNSIESEKLLPCFLSSDKIL LSFNNPSARFRAWNIPGSNTLFITTSGQYASLKLQSNLPSAIANSVQSISCPKGGRGTNDLFSAVITDRCWEESKPSSGL LLPGECSSAPWEDNDVQSPTWNFETQTYNKPTRFIQISAPKASMYSNSPAYCYQLCFKAYLSCFKEAIRHGCHIIQIPLI ASFPDFLPGSQHKEKVWIDSTKLALLHAIAIIAHQHRSDNIVIVLTSIPRPIYF >Mature_374_residues MCTLISAMRNFLPPDCKLPTLTYKQALITSLASGIILGLAGCLVGILSSITSLIIVSGFILGVSLLIAGILLSQRFCSQD NVLKPEIPEQEIPELEIPEFEIPELELLEPSTPPPSFIPPKPPLLPKLALKNTIKEMLFGWNSIESEKLLPCFLSSDKIL LSFNNPSARFRAWNIPGSNTLFITTSGQYASLKLQSNLPSAIANSVQSISCPKGGRGTNDLFSAVITDRCWEESKPSSGL LLPGECSSAPWEDNDVQSPTWNFETQTYNKPTRFIQISAPKASMYSNSPAYCYQLCFKAYLSCFKEAIRHGCHIIQIPLI ASFPDFLPGSQHKEKVWIDSTKLALLHAIAIIAHQHRSDNIVIVLTSIPRPIYF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41219; Mature: 41219
Theoretical pI: Translated: 7.02; Mature: 7.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCTLISAMRNFLPPDCKLPTLTYKQALITSLASGIILGLAGCLVGILSSITSLIIVSGFI CCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGVSLLIAGILLSQRFCSQDNVLKPEIPEQEIPELEIPEFEIPELELLEPSTPPPSFIPP HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCC KPPLLPKLALKNTIKEMLFGWNSIESEKLLPCFLSSDKILLSFNNPSARFRAWNIPGSNT CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCEEEEEECCCCCCEEEEECCCCCE LFITTSGQYASLKLQSNLPSAIANSVQSISCPKGGRGTNDLFSAVITDRCWEESKPSSGL EEEEECCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCE LLPGECSSAPWEDNDVQSPTWNFETQTYNKPTRFIQISAPKASMYSNSPAYCYQLCFKAY EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHCCCCHHHHHHHHHHHH LSCFKEAIRHGCHIIQIPLIASFPDFLPGSQHKEKVWIDSTKLALLHAIAIIAHQHRSDN HHHHHHHHHCCCEEEEECHHHCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHCCCCC IVIVLTSIPRPIYF EEEEEECCCCCCCC >Mature Secondary Structure MCTLISAMRNFLPPDCKLPTLTYKQALITSLASGIILGLAGCLVGILSSITSLIIVSGFI CCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGVSLLIAGILLSQRFCSQDNVLKPEIPEQEIPELEIPEFEIPELELLEPSTPPPSFIPP HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCC KPPLLPKLALKNTIKEMLFGWNSIESEKLLPCFLSSDKILLSFNNPSARFRAWNIPGSNT CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCEEEEEECCCCCCEEEEECCCCCE LFITTSGQYASLKLQSNLPSAIANSVQSISCPKGGRGTNDLFSAVITDRCWEESKPSSGL EEEEECCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCE LLPGECSSAPWEDNDVQSPTWNFETQTYNKPTRFIQISAPKASMYSNSPAYCYQLCFKAY EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHCCCCHHHHHHHHHHHH LSCFKEAIRHGCHIIQIPLIASFPDFLPGSQHKEKVWIDSTKLALLHAIAIIAHQHRSDN HHHHHHHHHCCCEEEEECHHHCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHCCCCC IVIVLTSIPRPIYF EEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA