| Definition | Chlamydia muridarum Nigg, complete genome. |
|---|---|
| Accession | NC_002620 |
| Length | 1,072,950 |
Click here to switch to the map view.
The map label for this gene is Not Available
Identifier: 15834941
GI number: 15834941
Start: 378645
End: 379982
Strand: Reverse
Name: Not Available
Synonym: TC0321
Alternate gene names: NA
Gene position: 379982-378645 (Counterclockwise)
Preceding gene: 15834942
Following gene: 15834940
Centisome position: 35.41
GC content: 42.53
Gene sequence:
>1338_bases TTGAGCATTGGCTCGCAACAATTCTCCTCATTCACCAAACTAAGTTTTAATAACATAGCGAAATTAACTGGAGTAGCGAA TCCAACTCGAGAGACTGATGCAGTCCCTTTACAATATCTTCGAGCAAACTATTTATCCAAGAATGATCCGAATCCGGGTT ATCTCCCTATTCAAGGAGGGAAGATGACTGGCAACATCAATATGGGGACGCATTCTATCTTCAATTTGAAACAACCAACT GCCCCGACTATACAACTCCCCCCCGACTCTGAAAAACCCTCAGATCCTAGTGAAGATGTTGATTTTCAAAATAAAACAAA AGAAGAACAAGAAGCCGCTATTGCAGACTACAACACAAAATTGGCTGCATATCAAAAGAAAATTAGTGACTACAATGTAG CTTGGAAAGCGTTTTATTCCGAAGCCGCAACTGTACAATACGTAAATGGTATAGTCACTAGACTAACAACCAATACACAA CTAGACACTGCCAATGCTTCTGCTAAAGAAGTCGAAAAAAAAATTGCATTAGCACAAAAAACCCTTGGGGTTGAGATAAC CACTCCCCCTCCTCCACCGACAATTGATCCTACTACAGGGACCTTTGCACCTGGAGGATCAACAAATCCCCCTACTACTA GCTCGACACCATCTTATGATAATCTCCCATCTAATATCAAAAATTCCGAGTTCGTGGTAACACAATCCGATAACACTCTT ACAGGGGATCTGAAAATGACTAACGCTCAGATCTCTAATATCAAAACTCCTGCAGATAGCGGAGAAGACAACTACGCAGC CAATGTTACCTATCTTGAATCTAAACTTAAGCAACCCAAGAGAACCTTTATTTCCAATACCTTCTCCCAAACTACAATTA GTGGGCATATCCCCTGGCTTAGCACAACCAGTGGATCCACTTCTGAGCCTGATTTTAAAACGACTGACTCCGATCAATAT TTTGAAACAACACAAGAGAATCTTAAAATTAAAACTGCAGGCTTACTTGTTTTATCTGTTCGAGGAACTTGGAATGGCTC AACTTCCGGAGGGAATACTCAAACTCCCGCTACTTTTCCTGTAAGTCTAACTGTTACACCCGATACAACTGGCGGAGGCG GATCAACAGGAAGTGCAACTACACTCACCCTCCCCATAACTCTCCACTCTGGGAATTCTGTGATGATGCAACTTCCTATT ACAGCAGCTGCCCAAGTGAAAATAGCTCCCTCCACAACTTCCGGAGGAAGCGGGACAACACCTTCAACACTATCCTCCTG GTCCTGGGAAGCTGCTTTATATCCAATAGATGTGACTTCCACAACAACATCTCCTTAG
Upstream 100 bases:
>100_bases AATCGATTAATTTTTAATTGAAAAATGAATAAAAACAAAAAAAACAACCAATTTTAATGCATCTATAGTTTTTCAACGGA ATACACCTGCGAATTCGATA
Downstream 100 bases:
>100_bases AGATTTTTGATTTAAGGGCTAAGCAAAGCTCAGTCCTTAAATCAAACCAGATTTAAATCAAAAAACATTTAAGGTTCGGA AACTAAAGATCAATAAATTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 445; Mature: 444
Protein sequence:
>445_residues MSIGSQQFSSFTKLSFNNIAKLTGVANPTRETDAVPLQYLRANYLSKNDPNPGYLPIQGGKMTGNINMGTHSIFNLKQPT APTIQLPPDSEKPSDPSEDVDFQNKTKEEQEAAIADYNTKLAAYQKKISDYNVAWKAFYSEAATVQYVNGIVTRLTTNTQ LDTANASAKEVEKKIALAQKTLGVEITTPPPPPTIDPTTGTFAPGGSTNPPTTSSTPSYDNLPSNIKNSEFVVTQSDNTL TGDLKMTNAQISNIKTPADSGEDNYAANVTYLESKLKQPKRTFISNTFSQTTISGHIPWLSTTSGSTSEPDFKTTDSDQY FETTQENLKIKTAGLLVLSVRGTWNGSTSGGNTQTPATFPVSLTVTPDTTGGGGSTGSATTLTLPITLHSGNSVMMQLPI TAAAQVKIAPSTTSGGSGTTPSTLSSWSWEAALYPIDVTSTTTSP
Sequences:
>Translated_445_residues MSIGSQQFSSFTKLSFNNIAKLTGVANPTRETDAVPLQYLRANYLSKNDPNPGYLPIQGGKMTGNINMGTHSIFNLKQPT APTIQLPPDSEKPSDPSEDVDFQNKTKEEQEAAIADYNTKLAAYQKKISDYNVAWKAFYSEAATVQYVNGIVTRLTTNTQ LDTANASAKEVEKKIALAQKTLGVEITTPPPPPTIDPTTGTFAPGGSTNPPTTSSTPSYDNLPSNIKNSEFVVTQSDNTL TGDLKMTNAQISNIKTPADSGEDNYAANVTYLESKLKQPKRTFISNTFSQTTISGHIPWLSTTSGSTSEPDFKTTDSDQY FETTQENLKIKTAGLLVLSVRGTWNGSTSGGNTQTPATFPVSLTVTPDTTGGGGSTGSATTLTLPITLHSGNSVMMQLPI TAAAQVKIAPSTTSGGSGTTPSTLSSWSWEAALYPIDVTSTTTSP >Mature_444_residues SIGSQQFSSFTKLSFNNIAKLTGVANPTRETDAVPLQYLRANYLSKNDPNPGYLPIQGGKMTGNINMGTHSIFNLKQPTA PTIQLPPDSEKPSDPSEDVDFQNKTKEEQEAAIADYNTKLAAYQKKISDYNVAWKAFYSEAATVQYVNGIVTRLTTNTQL DTANASAKEVEKKIALAQKTLGVEITTPPPPPTIDPTTGTFAPGGSTNPPTTSSTPSYDNLPSNIKNSEFVVTQSDNTLT GDLKMTNAQISNIKTPADSGEDNYAANVTYLESKLKQPKRTFISNTFSQTTISGHIPWLSTTSGSTSEPDFKTTDSDQYF ETTQENLKIKTAGLLVLSVRGTWNGSTSGGNTQTPATFPVSLTVTPDTTGGGGSTGSATTLTLPITLHSGNSVMMQLPIT AAAQVKIAPSTTSGGSGTTPSTLSSWSWEAALYPIDVTSTTTSP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47286; Mature: 47154
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIGSQQFSSFTKLSFNNIAKLTGVANPTRETDAVPLQYLRANYLSKNDPNPGYLPIQGG CCCCHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEECC KMTGNINMGTHSIFNLKQPTAPTIQLPPDSEKPSDPSEDVDFQNKTKEEQEAAIADYNTK EEEEEEECCCCEEEECCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCH LAAYQKKISDYNVAWKAFYSEAATVQYVNGIVTRLTTNTQLDTANASAKEVEKKIALAQK HHHHHHHHCCCCEEHHHHHCCCCHHHHHHHEEEEEECCCEEECCCCCHHHHHHHHHHHHH TLGVEITTPPPPPTIDPTTGTFAPGGSTNPPTTSSTPSYDNLPSNIKNSEFVVTQSDNTL HHCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEE TGDLKMTNAQISNIKTPADSGEDNYAANVTYLESKLKQPKRTFISNTFSQTTISGHIPWL ECEEEECCCCCCCCCCCCCCCCCCEEEEHHHHHHHHCCHHHHHHHCCCCCCEEECCCCEE STTSGSTSEPDFKTTDSDQYFETTQENLKIKTAGLLVLSVRGTWNGSTSGGNTQTPATFP EECCCCCCCCCCCCCCCCHHHHHHHHCEEEEEEEEEEEEEECCCCCCCCCCCCCCCEEEE VSLTVTPDTTGGGGSTGSATTLTLPITLHSGNSVMMQLPITAAAQVKIAPSTTSGGSGTT EEEEECCCCCCCCCCCCCEEEEEEEEEEECCCEEEEEECCCEEEEEEEECCCCCCCCCCC PSTLSSWSWEAALYPIDVTSTTTSP CCCCCCCCCEEEEEEEEECCCCCCC >Mature Secondary Structure SIGSQQFSSFTKLSFNNIAKLTGVANPTRETDAVPLQYLRANYLSKNDPNPGYLPIQGG CCCHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEECC KMTGNINMGTHSIFNLKQPTAPTIQLPPDSEKPSDPSEDVDFQNKTKEEQEAAIADYNTK EEEEEEECCCCEEEECCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCH LAAYQKKISDYNVAWKAFYSEAATVQYVNGIVTRLTTNTQLDTANASAKEVEKKIALAQK HHHHHHHHCCCCEEHHHHHCCCCHHHHHHHEEEEEECCCEEECCCCCHHHHHHHHHHHHH TLGVEITTPPPPPTIDPTTGTFAPGGSTNPPTTSSTPSYDNLPSNIKNSEFVVTQSDNTL HHCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEE TGDLKMTNAQISNIKTPADSGEDNYAANVTYLESKLKQPKRTFISNTFSQTTISGHIPWL ECEEEECCCCCCCCCCCCCCCCCCEEEEHHHHHHHHCCHHHHHHHCCCCCCEEECCCCEE STTSGSTSEPDFKTTDSDQYFETTQENLKIKTAGLLVLSVRGTWNGSTSGGNTQTPATFP EECCCCCCCCCCCCCCCCHHHHHHHHCEEEEEEEEEEEEEECCCCCCCCCCCCCCCEEEE VSLTVTPDTTGGGGSTGSATTLTLPITLHSGNSVMMQLPITAAAQVKIAPSTTSGGSGTT EEEEECCCCCCCCCCCCCEEEEEEEEEEECCCEEEEEECCCEEEEEEEECCCCCCCCCCC PSTLSSWSWEAALYPIDVTSTTTSP CCCCCCCCCEEEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA