Definition Chlamydia muridarum Nigg, complete genome.
Accession NC_002620
Length 1,072,950

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 15834941

GI number: 15834941

Start: 378645

End: 379982

Strand: Reverse

Name: Not Available

Synonym: TC0321

Alternate gene names: NA

Gene position: 379982-378645 (Counterclockwise)

Preceding gene: 15834942

Following gene: 15834940

Centisome position: 35.41

GC content: 42.53

Gene sequence:

>1338_bases
TTGAGCATTGGCTCGCAACAATTCTCCTCATTCACCAAACTAAGTTTTAATAACATAGCGAAATTAACTGGAGTAGCGAA
TCCAACTCGAGAGACTGATGCAGTCCCTTTACAATATCTTCGAGCAAACTATTTATCCAAGAATGATCCGAATCCGGGTT
ATCTCCCTATTCAAGGAGGGAAGATGACTGGCAACATCAATATGGGGACGCATTCTATCTTCAATTTGAAACAACCAACT
GCCCCGACTATACAACTCCCCCCCGACTCTGAAAAACCCTCAGATCCTAGTGAAGATGTTGATTTTCAAAATAAAACAAA
AGAAGAACAAGAAGCCGCTATTGCAGACTACAACACAAAATTGGCTGCATATCAAAAGAAAATTAGTGACTACAATGTAG
CTTGGAAAGCGTTTTATTCCGAAGCCGCAACTGTACAATACGTAAATGGTATAGTCACTAGACTAACAACCAATACACAA
CTAGACACTGCCAATGCTTCTGCTAAAGAAGTCGAAAAAAAAATTGCATTAGCACAAAAAACCCTTGGGGTTGAGATAAC
CACTCCCCCTCCTCCACCGACAATTGATCCTACTACAGGGACCTTTGCACCTGGAGGATCAACAAATCCCCCTACTACTA
GCTCGACACCATCTTATGATAATCTCCCATCTAATATCAAAAATTCCGAGTTCGTGGTAACACAATCCGATAACACTCTT
ACAGGGGATCTGAAAATGACTAACGCTCAGATCTCTAATATCAAAACTCCTGCAGATAGCGGAGAAGACAACTACGCAGC
CAATGTTACCTATCTTGAATCTAAACTTAAGCAACCCAAGAGAACCTTTATTTCCAATACCTTCTCCCAAACTACAATTA
GTGGGCATATCCCCTGGCTTAGCACAACCAGTGGATCCACTTCTGAGCCTGATTTTAAAACGACTGACTCCGATCAATAT
TTTGAAACAACACAAGAGAATCTTAAAATTAAAACTGCAGGCTTACTTGTTTTATCTGTTCGAGGAACTTGGAATGGCTC
AACTTCCGGAGGGAATACTCAAACTCCCGCTACTTTTCCTGTAAGTCTAACTGTTACACCCGATACAACTGGCGGAGGCG
GATCAACAGGAAGTGCAACTACACTCACCCTCCCCATAACTCTCCACTCTGGGAATTCTGTGATGATGCAACTTCCTATT
ACAGCAGCTGCCCAAGTGAAAATAGCTCCCTCCACAACTTCCGGAGGAAGCGGGACAACACCTTCAACACTATCCTCCTG
GTCCTGGGAAGCTGCTTTATATCCAATAGATGTGACTTCCACAACAACATCTCCTTAG

Upstream 100 bases:

>100_bases
AATCGATTAATTTTTAATTGAAAAATGAATAAAAACAAAAAAAACAACCAATTTTAATGCATCTATAGTTTTTCAACGGA
ATACACCTGCGAATTCGATA

Downstream 100 bases:

>100_bases
AGATTTTTGATTTAAGGGCTAAGCAAAGCTCAGTCCTTAAATCAAACCAGATTTAAATCAAAAAACATTTAAGGTTCGGA
AACTAAAGATCAATAAATTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 445; Mature: 444

Protein sequence:

>445_residues
MSIGSQQFSSFTKLSFNNIAKLTGVANPTRETDAVPLQYLRANYLSKNDPNPGYLPIQGGKMTGNINMGTHSIFNLKQPT
APTIQLPPDSEKPSDPSEDVDFQNKTKEEQEAAIADYNTKLAAYQKKISDYNVAWKAFYSEAATVQYVNGIVTRLTTNTQ
LDTANASAKEVEKKIALAQKTLGVEITTPPPPPTIDPTTGTFAPGGSTNPPTTSSTPSYDNLPSNIKNSEFVVTQSDNTL
TGDLKMTNAQISNIKTPADSGEDNYAANVTYLESKLKQPKRTFISNTFSQTTISGHIPWLSTTSGSTSEPDFKTTDSDQY
FETTQENLKIKTAGLLVLSVRGTWNGSTSGGNTQTPATFPVSLTVTPDTTGGGGSTGSATTLTLPITLHSGNSVMMQLPI
TAAAQVKIAPSTTSGGSGTTPSTLSSWSWEAALYPIDVTSTTTSP

Sequences:

>Translated_445_residues
MSIGSQQFSSFTKLSFNNIAKLTGVANPTRETDAVPLQYLRANYLSKNDPNPGYLPIQGGKMTGNINMGTHSIFNLKQPT
APTIQLPPDSEKPSDPSEDVDFQNKTKEEQEAAIADYNTKLAAYQKKISDYNVAWKAFYSEAATVQYVNGIVTRLTTNTQ
LDTANASAKEVEKKIALAQKTLGVEITTPPPPPTIDPTTGTFAPGGSTNPPTTSSTPSYDNLPSNIKNSEFVVTQSDNTL
TGDLKMTNAQISNIKTPADSGEDNYAANVTYLESKLKQPKRTFISNTFSQTTISGHIPWLSTTSGSTSEPDFKTTDSDQY
FETTQENLKIKTAGLLVLSVRGTWNGSTSGGNTQTPATFPVSLTVTPDTTGGGGSTGSATTLTLPITLHSGNSVMMQLPI
TAAAQVKIAPSTTSGGSGTTPSTLSSWSWEAALYPIDVTSTTTSP
>Mature_444_residues
SIGSQQFSSFTKLSFNNIAKLTGVANPTRETDAVPLQYLRANYLSKNDPNPGYLPIQGGKMTGNINMGTHSIFNLKQPTA
PTIQLPPDSEKPSDPSEDVDFQNKTKEEQEAAIADYNTKLAAYQKKISDYNVAWKAFYSEAATVQYVNGIVTRLTTNTQL
DTANASAKEVEKKIALAQKTLGVEITTPPPPPTIDPTTGTFAPGGSTNPPTTSSTPSYDNLPSNIKNSEFVVTQSDNTLT
GDLKMTNAQISNIKTPADSGEDNYAANVTYLESKLKQPKRTFISNTFSQTTISGHIPWLSTTSGSTSEPDFKTTDSDQYF
ETTQENLKIKTAGLLVLSVRGTWNGSTSGGNTQTPATFPVSLTVTPDTTGGGGSTGSATTLTLPITLHSGNSVMMQLPIT
AAAQVKIAPSTTSGGSGTTPSTLSSWSWEAALYPIDVTSTTTSP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47286; Mature: 47154

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIGSQQFSSFTKLSFNNIAKLTGVANPTRETDAVPLQYLRANYLSKNDPNPGYLPIQGG
CCCCHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEECC
KMTGNINMGTHSIFNLKQPTAPTIQLPPDSEKPSDPSEDVDFQNKTKEEQEAAIADYNTK
EEEEEEECCCCEEEECCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCH
LAAYQKKISDYNVAWKAFYSEAATVQYVNGIVTRLTTNTQLDTANASAKEVEKKIALAQK
HHHHHHHHCCCCEEHHHHHCCCCHHHHHHHEEEEEECCCEEECCCCCHHHHHHHHHHHHH
TLGVEITTPPPPPTIDPTTGTFAPGGSTNPPTTSSTPSYDNLPSNIKNSEFVVTQSDNTL
HHCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEE
TGDLKMTNAQISNIKTPADSGEDNYAANVTYLESKLKQPKRTFISNTFSQTTISGHIPWL
ECEEEECCCCCCCCCCCCCCCCCCEEEEHHHHHHHHCCHHHHHHHCCCCCCEEECCCCEE
STTSGSTSEPDFKTTDSDQYFETTQENLKIKTAGLLVLSVRGTWNGSTSGGNTQTPATFP
EECCCCCCCCCCCCCCCCHHHHHHHHCEEEEEEEEEEEEEECCCCCCCCCCCCCCCEEEE
VSLTVTPDTTGGGGSTGSATTLTLPITLHSGNSVMMQLPITAAAQVKIAPSTTSGGSGTT
EEEEECCCCCCCCCCCCCEEEEEEEEEEECCCEEEEEECCCEEEEEEEECCCCCCCCCCC
PSTLSSWSWEAALYPIDVTSTTTSP
CCCCCCCCCEEEEEEEEECCCCCCC
>Mature Secondary Structure 
SIGSQQFSSFTKLSFNNIAKLTGVANPTRETDAVPLQYLRANYLSKNDPNPGYLPIQGG
CCCHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEECC
KMTGNINMGTHSIFNLKQPTAPTIQLPPDSEKPSDPSEDVDFQNKTKEEQEAAIADYNTK
EEEEEEECCCCEEEECCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCH
LAAYQKKISDYNVAWKAFYSEAATVQYVNGIVTRLTTNTQLDTANASAKEVEKKIALAQK
HHHHHHHHCCCCEEHHHHHCCCCHHHHHHHEEEEEECCCEEECCCCCHHHHHHHHHHHHH
TLGVEITTPPPPPTIDPTTGTFAPGGSTNPPTTSSTPSYDNLPSNIKNSEFVVTQSDNTL
HHCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEE
TGDLKMTNAQISNIKTPADSGEDNYAANVTYLESKLKQPKRTFISNTFSQTTISGHIPWL
ECEEEECCCCCCCCCCCCCCCCCCEEEEHHHHHHHHCCHHHHHHHCCCCCCEEECCCCEE
STTSGSTSEPDFKTTDSDQYFETTQENLKIKTAGLLVLSVRGTWNGSTSGGNTQTPATFP
EECCCCCCCCCCCCCCCCHHHHHHHHCEEEEEEEEEEEEEECCCCCCCCCCCCCCCEEEE
VSLTVTPDTTGGGGSTGSATTLTLPITLHSGNSVMMQLPITAAAQVKIAPSTTSGGSGTT
EEEEECCCCCCCCCCCCCEEEEEEEEEEECCCEEEEEECCCEEEEEEEECCCCCCCCCCC
PSTLSSWSWEAALYPIDVTSTTTSP
CCCCCCCCCEEEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA