| Definition | Chlamydia muridarum Nigg, complete genome. |
|---|---|
| Accession | NC_002620 |
| Length | 1,072,950 |
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Identifier: 15834939
GI number: 15834939
Start: 375974
End: 377278
Strand: Direct
Name: Not Available
Synonym: TC0319
Alternate gene names: NA
Gene position: 375974-377278 (Clockwise)
Preceding gene: 15834938
Following gene: 15834944
Centisome position: 35.04
GC content: 42.07
Gene sequence:
>1305_bases ATGAATGATAAAACGATAATTCATAAAGAATCTGTTGCTTTTGCGGCAATCCCTCCTACCCAGCCTGCAGCTCCTGTTAC CAAAATGTTGTTGGAATGTACTCAGACAGGGGGAAATACTGGTGTTGATGGGATGGTCACCACAGCTTATGTTAATTTAG ATGCCAAGAATCAGCAAGTACGTCAGGTTGGTGCTGGGACTGAAGACCAGGATGTTGTCGTGTTGTCACAACTGGATGGC TACTTACAGAAAGGGGCTAAATCAATAGCCGGATTATTTCTTTCGACTTCCGGGGGAATGATGGTTGGAGATATTAATAT GGGAACCAACCAACAGAATACCATTCGAGGTCTTCCTTCTTCCTGGGGAGAAGCGTCATTTCTAGGAAATGATTATGCAG CATCTGTTGGGATAGTAAATGATGTCTTAGGAAACTATGAGGACCGATTAAATGATCTGATTGCTAAAATCAATATGTAT GCTGGGACCGGAGAGGGCAGCATGGCCAAACTCATCACAGATCTAGGAAGTCCTAAAGAGACCACGTCAGGATCGACGAC TACCATAACATTTGATAAGCCTGAAGAGGCTAAGTGGCTGTTATTAAGCGCTAAGAATGCTATGACAGGGACTTTGCGTT TCGAGCAACAGCAGGGAGCTTTGCCAACAGCTGCCGCGCCTACAATAAAAAATCTAAAAACTGGTGACATAGGAGTCGTG GGAACGGCAACGCCTAAAGAAAAGTTACAGAAAATTGTCACTGTCTCAGATTTAACGACTATACTGAATGATTTACAAAA TAATTCCTCTGGAGGTTCAGGATCAGGAACGGGGTCAACGACAACACCTACTTTCCCAAATTGGACAGGGCAAGAAGTTC CTTATTTTGTGGAGCAGAATCCCAATGGGACTTCAGGTAGTGGTACTCAAAGTCCTATTAAATCTACTAATGCTGATAAG TATATTAAAAAGGAGAATTCTACCTATTCTCTATTGAGACGAGGCGTTTATCTCGTAACATTTGCTTATGAATTTACTTC CTCTCAAAATCAGGCTGTCACATGTACCGGAACACTTACAGAAAAAACAACGGGAGGAACAGGATCTAATCCTGAAACCC TATTTTCTGTAGTAGGTTCCTCAGATGGTTTGACTGTAGTGGGTAGTTTCTATATTCTGGTTCCTGGAGAGAAAGCATTT TCAGAACATACGTTAGAGTTGAAATTAACTACCGGAACTGCTGGAACAGCTGCTACAGCTTCTAAGAGTTATGTAGCTAT TTCTTATATGGGAGCTGGATATTAA
Upstream 100 bases:
>100_bases AATTCTTTTTAGTTGTTTTATGCGAAACTTTGTTTTGTTTGTTAATTTAATTTTTTCTAATTAAAAGGAAATTAGTTTTA ATTAATTAAAAAGACAAAAC
Downstream 100 bases:
>100_bases TACTCTTAAGTTAAGGGAGAGAATCTCCCTTAACATTTCTTGGTTAGCTATCTTGTAATGCTAGGATCTAGGGTGTAGGC GTAGTTGTGTTTTTTGTCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 434; Mature: 434
Protein sequence:
>434_residues MNDKTIIHKESVAFAAIPPTQPAAPVTKMLLECTQTGGNTGVDGMVTTAYVNLDAKNQQVRQVGAGTEDQDVVVLSQLDG YLQKGAKSIAGLFLSTSGGMMVGDINMGTNQQNTIRGLPSSWGEASFLGNDYAASVGIVNDVLGNYEDRLNDLIAKINMY AGTGEGSMAKLITDLGSPKETTSGSTTTITFDKPEEAKWLLLSAKNAMTGTLRFEQQQGALPTAAAPTIKNLKTGDIGVV GTATPKEKLQKIVTVSDLTTILNDLQNNSSGGSGSGTGSTTTPTFPNWTGQEVPYFVEQNPNGTSGSGTQSPIKSTNADK YIKKENSTYSLLRRGVYLVTFAYEFTSSQNQAVTCTGTLTEKTTGGTGSNPETLFSVVGSSDGLTVVGSFYILVPGEKAF SEHTLELKLTTGTAGTAATASKSYVAISYMGAGY
Sequences:
>Translated_434_residues MNDKTIIHKESVAFAAIPPTQPAAPVTKMLLECTQTGGNTGVDGMVTTAYVNLDAKNQQVRQVGAGTEDQDVVVLSQLDG YLQKGAKSIAGLFLSTSGGMMVGDINMGTNQQNTIRGLPSSWGEASFLGNDYAASVGIVNDVLGNYEDRLNDLIAKINMY AGTGEGSMAKLITDLGSPKETTSGSTTTITFDKPEEAKWLLLSAKNAMTGTLRFEQQQGALPTAAAPTIKNLKTGDIGVV GTATPKEKLQKIVTVSDLTTILNDLQNNSSGGSGSGTGSTTTPTFPNWTGQEVPYFVEQNPNGTSGSGTQSPIKSTNADK YIKKENSTYSLLRRGVYLVTFAYEFTSSQNQAVTCTGTLTEKTTGGTGSNPETLFSVVGSSDGLTVVGSFYILVPGEKAF SEHTLELKLTTGTAGTAATASKSYVAISYMGAGY >Mature_434_residues MNDKTIIHKESVAFAAIPPTQPAAPVTKMLLECTQTGGNTGVDGMVTTAYVNLDAKNQQVRQVGAGTEDQDVVVLSQLDG YLQKGAKSIAGLFLSTSGGMMVGDINMGTNQQNTIRGLPSSWGEASFLGNDYAASVGIVNDVLGNYEDRLNDLIAKINMY AGTGEGSMAKLITDLGSPKETTSGSTTTITFDKPEEAKWLLLSAKNAMTGTLRFEQQQGALPTAAAPTIKNLKTGDIGVV GTATPKEKLQKIVTVSDLTTILNDLQNNSSGGSGSGTGSTTTPTFPNWTGQEVPYFVEQNPNGTSGSGTQSPIKSTNADK YIKKENSTYSLLRRGVYLVTFAYEFTSSQNQAVTCTGTLTEKTTGGTGSNPETLFSVVGSSDGLTVVGSFYILVPGEKAF SEHTLELKLTTGTAGTAATASKSYVAISYMGAGY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45407; Mature: 45407
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDKTIIHKESVAFAAIPPTQPAAPVTKMLLECTQTGGNTGVDGMVTTAYVNLDAKNQQV CCCCEEEEECCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCHHH RQVGAGTEDQDVVVLSQLDGYLQKGAKSIAGLFLSTSGGMMVGDINMGTNQQNTIRGLPS HHHCCCCCCCCEEEHHHHHHHHHHHHHHHHEEEEECCCCEEEEEEECCCCCCHHCCCCCC SWGEASFLGNDYAASVGIVNDVLGNYEDRLNDLIAKINMYAGTGEGSMAKLITDLGSPKE CCCCCEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHEEEECCCCCHHHHHHHHCCCCCC TTSGSTTTITFDKPEEAKWLLLSAKNAMTGTLRFEQQQGALPTAAAPTIKNLKTGDIGVV CCCCCEEEEEECCCCCCEEEEEECCCCEEEEEEEEHHCCCCCCCCCCCCCCCCCCCEEEE GTATPKEKLQKIVTVSDLTTILNDLQNNSSGGSGSGTGSTTTPTFPNWTGQEVPYFVEQN ECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECC PNGTSGSGTQSPIKSTNADKYIKKENSTYSLLRRGVYLVTFAYEFTSSQNQAVTCTGTLT CCCCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHCCEEEEEEEEEECCCCCCEEEEEEEEE EKTTGGTGSNPETLFSVVGSSDGLTVVGSFYILVPGEKAFSEHTLELKLTTGTAGTAATA ECCCCCCCCCHHHHHHHHCCCCCEEEEEEEEEEECCCHHCCCCEEEEEEECCCCCCCCCC SKSYVAISYMGAGY CCCEEEEEECCCCC >Mature Secondary Structure MNDKTIIHKESVAFAAIPPTQPAAPVTKMLLECTQTGGNTGVDGMVTTAYVNLDAKNQQV CCCCEEEEECCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCHHH RQVGAGTEDQDVVVLSQLDGYLQKGAKSIAGLFLSTSGGMMVGDINMGTNQQNTIRGLPS HHHCCCCCCCCEEEHHHHHHHHHHHHHHHHEEEEECCCCEEEEEEECCCCCCHHCCCCCC SWGEASFLGNDYAASVGIVNDVLGNYEDRLNDLIAKINMYAGTGEGSMAKLITDLGSPKE CCCCCEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHEEEECCCCCHHHHHHHHCCCCCC TTSGSTTTITFDKPEEAKWLLLSAKNAMTGTLRFEQQQGALPTAAAPTIKNLKTGDIGVV CCCCCEEEEEECCCCCCEEEEEECCCCEEEEEEEEHHCCCCCCCCCCCCCCCCCCCEEEE GTATPKEKLQKIVTVSDLTTILNDLQNNSSGGSGSGTGSTTTPTFPNWTGQEVPYFVEQN ECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECC PNGTSGSGTQSPIKSTNADKYIKKENSTYSLLRRGVYLVTFAYEFTSSQNQAVTCTGTLT CCCCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHCCEEEEEEEEEECCCCCCEEEEEEEEE EKTTGGTGSNPETLFSVVGSSDGLTVVGSFYILVPGEKAFSEHTLELKLTTGTAGTAATA ECCCCCCCCCHHHHHHHHCCCCCEEEEEEEEEEECCCHHCCCCEEEEEEECCCCCCCCCC SKSYVAISYMGAGY CCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA