Definition Chlamydia muridarum Nigg, complete genome.
Accession NC_002620
Length 1,072,950

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 15834939

GI number: 15834939

Start: 375974

End: 377278

Strand: Direct

Name: Not Available

Synonym: TC0319

Alternate gene names: NA

Gene position: 375974-377278 (Clockwise)

Preceding gene: 15834938

Following gene: 15834944

Centisome position: 35.04

GC content: 42.07

Gene sequence:

>1305_bases
ATGAATGATAAAACGATAATTCATAAAGAATCTGTTGCTTTTGCGGCAATCCCTCCTACCCAGCCTGCAGCTCCTGTTAC
CAAAATGTTGTTGGAATGTACTCAGACAGGGGGAAATACTGGTGTTGATGGGATGGTCACCACAGCTTATGTTAATTTAG
ATGCCAAGAATCAGCAAGTACGTCAGGTTGGTGCTGGGACTGAAGACCAGGATGTTGTCGTGTTGTCACAACTGGATGGC
TACTTACAGAAAGGGGCTAAATCAATAGCCGGATTATTTCTTTCGACTTCCGGGGGAATGATGGTTGGAGATATTAATAT
GGGAACCAACCAACAGAATACCATTCGAGGTCTTCCTTCTTCCTGGGGAGAAGCGTCATTTCTAGGAAATGATTATGCAG
CATCTGTTGGGATAGTAAATGATGTCTTAGGAAACTATGAGGACCGATTAAATGATCTGATTGCTAAAATCAATATGTAT
GCTGGGACCGGAGAGGGCAGCATGGCCAAACTCATCACAGATCTAGGAAGTCCTAAAGAGACCACGTCAGGATCGACGAC
TACCATAACATTTGATAAGCCTGAAGAGGCTAAGTGGCTGTTATTAAGCGCTAAGAATGCTATGACAGGGACTTTGCGTT
TCGAGCAACAGCAGGGAGCTTTGCCAACAGCTGCCGCGCCTACAATAAAAAATCTAAAAACTGGTGACATAGGAGTCGTG
GGAACGGCAACGCCTAAAGAAAAGTTACAGAAAATTGTCACTGTCTCAGATTTAACGACTATACTGAATGATTTACAAAA
TAATTCCTCTGGAGGTTCAGGATCAGGAACGGGGTCAACGACAACACCTACTTTCCCAAATTGGACAGGGCAAGAAGTTC
CTTATTTTGTGGAGCAGAATCCCAATGGGACTTCAGGTAGTGGTACTCAAAGTCCTATTAAATCTACTAATGCTGATAAG
TATATTAAAAAGGAGAATTCTACCTATTCTCTATTGAGACGAGGCGTTTATCTCGTAACATTTGCTTATGAATTTACTTC
CTCTCAAAATCAGGCTGTCACATGTACCGGAACACTTACAGAAAAAACAACGGGAGGAACAGGATCTAATCCTGAAACCC
TATTTTCTGTAGTAGGTTCCTCAGATGGTTTGACTGTAGTGGGTAGTTTCTATATTCTGGTTCCTGGAGAGAAAGCATTT
TCAGAACATACGTTAGAGTTGAAATTAACTACCGGAACTGCTGGAACAGCTGCTACAGCTTCTAAGAGTTATGTAGCTAT
TTCTTATATGGGAGCTGGATATTAA

Upstream 100 bases:

>100_bases
AATTCTTTTTAGTTGTTTTATGCGAAACTTTGTTTTGTTTGTTAATTTAATTTTTTCTAATTAAAAGGAAATTAGTTTTA
ATTAATTAAAAAGACAAAAC

Downstream 100 bases:

>100_bases
TACTCTTAAGTTAAGGGAGAGAATCTCCCTTAACATTTCTTGGTTAGCTATCTTGTAATGCTAGGATCTAGGGTGTAGGC
GTAGTTGTGTTTTTTGTCAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 434; Mature: 434

Protein sequence:

>434_residues
MNDKTIIHKESVAFAAIPPTQPAAPVTKMLLECTQTGGNTGVDGMVTTAYVNLDAKNQQVRQVGAGTEDQDVVVLSQLDG
YLQKGAKSIAGLFLSTSGGMMVGDINMGTNQQNTIRGLPSSWGEASFLGNDYAASVGIVNDVLGNYEDRLNDLIAKINMY
AGTGEGSMAKLITDLGSPKETTSGSTTTITFDKPEEAKWLLLSAKNAMTGTLRFEQQQGALPTAAAPTIKNLKTGDIGVV
GTATPKEKLQKIVTVSDLTTILNDLQNNSSGGSGSGTGSTTTPTFPNWTGQEVPYFVEQNPNGTSGSGTQSPIKSTNADK
YIKKENSTYSLLRRGVYLVTFAYEFTSSQNQAVTCTGTLTEKTTGGTGSNPETLFSVVGSSDGLTVVGSFYILVPGEKAF
SEHTLELKLTTGTAGTAATASKSYVAISYMGAGY

Sequences:

>Translated_434_residues
MNDKTIIHKESVAFAAIPPTQPAAPVTKMLLECTQTGGNTGVDGMVTTAYVNLDAKNQQVRQVGAGTEDQDVVVLSQLDG
YLQKGAKSIAGLFLSTSGGMMVGDINMGTNQQNTIRGLPSSWGEASFLGNDYAASVGIVNDVLGNYEDRLNDLIAKINMY
AGTGEGSMAKLITDLGSPKETTSGSTTTITFDKPEEAKWLLLSAKNAMTGTLRFEQQQGALPTAAAPTIKNLKTGDIGVV
GTATPKEKLQKIVTVSDLTTILNDLQNNSSGGSGSGTGSTTTPTFPNWTGQEVPYFVEQNPNGTSGSGTQSPIKSTNADK
YIKKENSTYSLLRRGVYLVTFAYEFTSSQNQAVTCTGTLTEKTTGGTGSNPETLFSVVGSSDGLTVVGSFYILVPGEKAF
SEHTLELKLTTGTAGTAATASKSYVAISYMGAGY
>Mature_434_residues
MNDKTIIHKESVAFAAIPPTQPAAPVTKMLLECTQTGGNTGVDGMVTTAYVNLDAKNQQVRQVGAGTEDQDVVVLSQLDG
YLQKGAKSIAGLFLSTSGGMMVGDINMGTNQQNTIRGLPSSWGEASFLGNDYAASVGIVNDVLGNYEDRLNDLIAKINMY
AGTGEGSMAKLITDLGSPKETTSGSTTTITFDKPEEAKWLLLSAKNAMTGTLRFEQQQGALPTAAAPTIKNLKTGDIGVV
GTATPKEKLQKIVTVSDLTTILNDLQNNSSGGSGSGTGSTTTPTFPNWTGQEVPYFVEQNPNGTSGSGTQSPIKSTNADK
YIKKENSTYSLLRRGVYLVTFAYEFTSSQNQAVTCTGTLTEKTTGGTGSNPETLFSVVGSSDGLTVVGSFYILVPGEKAF
SEHTLELKLTTGTAGTAATASKSYVAISYMGAGY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45407; Mature: 45407

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDKTIIHKESVAFAAIPPTQPAAPVTKMLLECTQTGGNTGVDGMVTTAYVNLDAKNQQV
CCCCEEEEECCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCHHH
RQVGAGTEDQDVVVLSQLDGYLQKGAKSIAGLFLSTSGGMMVGDINMGTNQQNTIRGLPS
HHHCCCCCCCCEEEHHHHHHHHHHHHHHHHEEEEECCCCEEEEEEECCCCCCHHCCCCCC
SWGEASFLGNDYAASVGIVNDVLGNYEDRLNDLIAKINMYAGTGEGSMAKLITDLGSPKE
CCCCCEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHEEEECCCCCHHHHHHHHCCCCCC
TTSGSTTTITFDKPEEAKWLLLSAKNAMTGTLRFEQQQGALPTAAAPTIKNLKTGDIGVV
CCCCCEEEEEECCCCCCEEEEEECCCCEEEEEEEEHHCCCCCCCCCCCCCCCCCCCEEEE
GTATPKEKLQKIVTVSDLTTILNDLQNNSSGGSGSGTGSTTTPTFPNWTGQEVPYFVEQN
ECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECC
PNGTSGSGTQSPIKSTNADKYIKKENSTYSLLRRGVYLVTFAYEFTSSQNQAVTCTGTLT
CCCCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHCCEEEEEEEEEECCCCCCEEEEEEEEE
EKTTGGTGSNPETLFSVVGSSDGLTVVGSFYILVPGEKAFSEHTLELKLTTGTAGTAATA
ECCCCCCCCCHHHHHHHHCCCCCEEEEEEEEEEECCCHHCCCCEEEEEEECCCCCCCCCC
SKSYVAISYMGAGY
CCCEEEEEECCCCC
>Mature Secondary Structure
MNDKTIIHKESVAFAAIPPTQPAAPVTKMLLECTQTGGNTGVDGMVTTAYVNLDAKNQQV
CCCCEEEEECCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCHHH
RQVGAGTEDQDVVVLSQLDGYLQKGAKSIAGLFLSTSGGMMVGDINMGTNQQNTIRGLPS
HHHCCCCCCCCEEEHHHHHHHHHHHHHHHHEEEEECCCCEEEEEEECCCCCCHHCCCCCC
SWGEASFLGNDYAASVGIVNDVLGNYEDRLNDLIAKINMYAGTGEGSMAKLITDLGSPKE
CCCCCEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHEEEECCCCCHHHHHHHHCCCCCC
TTSGSTTTITFDKPEEAKWLLLSAKNAMTGTLRFEQQQGALPTAAAPTIKNLKTGDIGVV
CCCCCEEEEEECCCCCCEEEEEECCCCEEEEEEEEHHCCCCCCCCCCCCCCCCCCCEEEE
GTATPKEKLQKIVTVSDLTTILNDLQNNSSGGSGSGTGSTTTPTFPNWTGQEVPYFVEQN
ECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECC
PNGTSGSGTQSPIKSTNADKYIKKENSTYSLLRRGVYLVTFAYEFTSSQNQAVTCTGTLT
CCCCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHCCEEEEEEEEEECCCCCCEEEEEEEEE
EKTTGGTGSNPETLFSVVGSSDGLTVVGSFYILVPGEKAFSEHTLELKLTTGTAGTAATA
ECCCCCCCCCHHHHHHHHCCCCCEEEEEEEEEEECCCHHCCCCEEEEEEECCCCCCCCCC
SKSYVAISYMGAGY
CCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA