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The map label for this gene is ssb

Identifier: 15834934

GI number: 15834934

Start: 370913

End: 371395

Strand: Direct

Name: ssb

Synonym: TC0314

Alternate gene names: 15834934

Gene position: 370913-371395 (Clockwise)

Preceding gene: 15834931

Following gene: 15834935

Centisome position: 34.57

GC content: 43.69

Gene sequence:

>483_bases
GTGGTTTTTATGTTGTTCGGATATTTGGTAGGATTTCTAGCTGCCGATCCTGAAGAAAGAATGACGTCAGGGGGTAAACG
GGTTGTTGTTTTACGTTTAGGCGTTAAATCCCGCGTGGGGTCTAAAGACGAAACAGTATGGTGCCGATGCAATATCTGGA
ATAATCGTTATGATAAAATGATCCCTTATCTGAAAAAAGGATCTTCAGTGATTGTTGCGGGAGAGCTTTCTGTAGAGAGC
TATATGGGGAGAGACGGTTCTCCTCAAGCTTCTATCTCTGTAAGTGTAGACACACTGAAGTTTAATTCAGGGTCTTCTCG
TCCTGAAAGTCGGGGTTCGGATGAGGGGCGTCAGCGATCTAATGATAATGTCTCTCTTGGATTTGAAGGAGAGAGTTTGG
ATACAGAAATCGCCCTTGATAAGGAAGTATATGCTGGATTTGGAGAGGATCAGCAATACGCTAGCGAGGATGTTCCTTTC
TAA

Upstream 100 bases:

>100_bases
TCCTAGTGTACAGTCTTCGAAGAAGACGAAGAGGTTCTGAATGAACAGCTTCTTCTTTTGAGTAGGGTAATTCGCAGGAA
GTAAGTTTTAATAGACAAGG

Downstream 100 bases:

>100_bases
TTTTTCGTTTTTGGCCCCTTGGCAAGAGAGTTTCTTTTTCCTAAGGGGCCTGTCTTTTTTCATTTCATTTAACCAATCAG
CTAAGAAATTATTGGTCCAT

Product: single-stranded DNA-binding protein

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein [H]

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MVFMLFGYLVGFLAADPEERMTSGGKRVVVLRLGVKSRVGSKDETVWCRCNIWNNRYDKMIPYLKKGSSVIVAGELSVES
YMGRDGSPQASISVSVDTLKFNSGSSRPESRGSDEGRQRSNDNVSLGFEGESLDTEIALDKEVYAGFGEDQQYASEDVPF

Sequences:

>Translated_160_residues
MVFMLFGYLVGFLAADPEERMTSGGKRVVVLRLGVKSRVGSKDETVWCRCNIWNNRYDKMIPYLKKGSSVIVAGELSVES
YMGRDGSPQASISVSVDTLKFNSGSSRPESRGSDEGRQRSNDNVSLGFEGESLDTEIALDKEVYAGFGEDQQYASEDVPF
>Mature_160_residues
MVFMLFGYLVGFLAADPEERMTSGGKRVVVLRLGVKSRVGSKDETVWCRCNIWNNRYDKMIPYLKKGSSVIVAGELSVES
YMGRDGSPQASISVSVDTLKFNSGSSRPESRGSDEGRQRSNDNVSLGFEGESLDTEIALDKEVYAGFGEDQQYASEDVPF

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 17643; Mature: 17643

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVFMLFGYLVGFLAADPEERMTSGGKRVVVLRLGVKSRVGSKDETVWCRCNIWNNRYDKM
CEEEHHHHHHHHHCCCCHHHHHCCCCEEEEEEECCCCCCCCCCCEEEEEEEECCCCHHHH
IPYLKKGSSVIVAGELSVESYMGRDGSPQASISVSVDTLKFNSGSSRPESRGSDEGRQRS
HHHHHCCCEEEEEECCCHHHHCCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCHHCC
NDNVSLGFEGESLDTEIALDKEVYAGFGEDQQYASEDVPF
CCCEEEEECCCCCCCEEEECHHHHCCCCCCCHHCCCCCCC
>Mature Secondary Structure
MVFMLFGYLVGFLAADPEERMTSGGKRVVVLRLGVKSRVGSKDETVWCRCNIWNNRYDKM
CEEEHHHHHHHHHCCCCHHHHHCCCCEEEEEEECCCCCCCCCCCEEEEEEEECCCCHHHH
IPYLKKGSSVIVAGELSVESYMGRDGSPQASISVSVDTLKFNSGSSRPESRGSDEGRQRS
HHHHHCCCEEEEEECCCHHHHCCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCHHCC
NDNVSLGFEGESLDTEIALDKEVYAGFGEDQQYASEDVPF
CCCEEEEECCCCCCCEEEECHHHHCCCCCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10684935 [H]