| Definition | Chlamydia muridarum Nigg, complete genome. |
|---|---|
| Accession | NC_002620 |
| Length | 1,072,950 |
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Identifier: 15834931
GI number: 15834931
Start: 366951
End: 367811
Strand: Direct
Name: Not Available
Synonym: TC0311
Alternate gene names: NA
Gene position: 366951-367811 (Clockwise)
Preceding gene: 15834930
Following gene: 15834934
Centisome position: 34.2
GC content: 41.7
Gene sequence:
>861_bases ATGAACATCTTAACAGGAACCCAAAGGACAAGTAGGGAGAAGAAGAAAGTGAAAAAGTTAAATCTACTCGTGCTGTTAGG AGTGTTTTGTGGGGTGGGGGCTGTTGGAGATGCCGATGTTAAGGTATCTGATGCCCTGTCTCAGTCTATTCTTTCCGAAC CAAGGATCCGCGTTCTTTTGTTGAGTGAAAGTACGACGGCTTTAGTTGAAGCTAAGGGAGCTTTTTCTGTATTTGGAGAT GGCGAGCTTTTGCGAGTTTCTTCTCAAGGACAACGTTGTGCTGCTCATGCATTATATGGAGGGATTCGTTGGGGAGAGAA TTATCCTAATGTTGAGTGTTTAAAAATCGAACCTCTTGATGGATCCGCGTCTCTATTTGTTAATGGTATTCAATACAAAG GCTCCGTATACATTCACAAAACAGAGCGTAACTGTTTGTTTGTGGTGAACGAGCTTGCGATAGAAGACTATCTGAAGTCA GTCCTTTCTGTGAAATATTTGAAAGAATTGGATAAAGAAGCTTTATCGGCTTGCGTCATCTTAGAGAGAACGGCTTTGTA CGAGCGTCTTCTTGCAGGTAATGCTAATAGCTTTTGGCATGTCAATGCTCAGGAAGATCGTTATGGGGGGTATGGAGTTA CATCCCAGTTTTATGGTGTAGAAGAGGCTGTGGATTGGACATCTCGACTCGTGTTGGATAATCCCGAGGGATTAGTTTTC AATGCAGATTATCTGTTGCAATCCAATGTAGATCGTTTAGCTATAGAAGGCTATAATGCGCGGCAAATTTTAGAGAAATT TTATAAAGATGCTGATCTTGTCGTCATTGAGTCTTGGGAAGACAATAATAGAGGTGTTTGA
Upstream 100 bases:
>100_bases GAGGATGTCAGGACTCTGGAAGATATGTACGAACCCTTTTTGATTTTAAAAGGATTGGTTCAACGAACCGCGAGAGGGCG GGTTGCAACTCCTTTGGCAT
Downstream 100 bases:
>100_bases AGAACTTATTAAGTTCTTTTGTGTGTAAGGACCGAACTCTTTATAGGGTTCGGTCTTTTTATTTGGGTTCAATAGGTTTC TTTTTTCTACTAATTGCCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 286; Mature: 286
Protein sequence:
>286_residues MNILTGTQRTSREKKKVKKLNLLVLLGVFCGVGAVGDADVKVSDALSQSILSEPRIRVLLLSESTTALVEAKGAFSVFGD GELLRVSSQGQRCAAHALYGGIRWGENYPNVECLKIEPLDGSASLFVNGIQYKGSVYIHKTERNCLFVVNELAIEDYLKS VLSVKYLKELDKEALSACVILERTALYERLLAGNANSFWHVNAQEDRYGGYGVTSQFYGVEEAVDWTSRLVLDNPEGLVF NADYLLQSNVDRLAIEGYNARQILEKFYKDADLVVIESWEDNNRGV
Sequences:
>Translated_286_residues MNILTGTQRTSREKKKVKKLNLLVLLGVFCGVGAVGDADVKVSDALSQSILSEPRIRVLLLSESTTALVEAKGAFSVFGD GELLRVSSQGQRCAAHALYGGIRWGENYPNVECLKIEPLDGSASLFVNGIQYKGSVYIHKTERNCLFVVNELAIEDYLKS VLSVKYLKELDKEALSACVILERTALYERLLAGNANSFWHVNAQEDRYGGYGVTSQFYGVEEAVDWTSRLVLDNPEGLVF NADYLLQSNVDRLAIEGYNARQILEKFYKDADLVVIESWEDNNRGV >Mature_286_residues MNILTGTQRTSREKKKVKKLNLLVLLGVFCGVGAVGDADVKVSDALSQSILSEPRIRVLLLSESTTALVEAKGAFSVFGD GELLRVSSQGQRCAAHALYGGIRWGENYPNVECLKIEPLDGSASLFVNGIQYKGSVYIHKTERNCLFVVNELAIEDYLKS VLSVKYLKELDKEALSACVILERTALYERLLAGNANSFWHVNAQEDRYGGYGVTSQFYGVEEAVDWTSRLVLDNPEGLVF NADYLLQSNVDRLAIEGYNARQILEKFYKDADLVVIESWEDNNRGV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chlamydial CPn_0389/CT_041/TC_0311 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y311_CHLMU (Q9PKZ7)
Other databases:
- EMBL: AE002160 - PIR: F81717 - RefSeq: NP_296690.1 - GeneID: 1246354 - GenomeReviews: AE002160_GR - KEGG: cmu:TC0311 - TIGR: TC_0311 - HOGENOM: HBG402688 - OMA: ANVDRLA - ProtClustDB: CLSK871151 - BioCyc: CMUR243161:TC_0311-MONOMER - InterPro: IPR013693
Pfam domain/function: PF08486 SpoIID
EC number: NA
Molecular weight: Translated: 31758; Mature: 31758
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: PS00070 ALDEHYDE_DEHYDR_CYS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNILTGTQRTSREKKKVKKLNLLVLLGVFCGVGAVGDADVKVSDALSQSILSEPRIRVLL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHCCCCEEEEE LSESTTALVEAKGAFSVFGDGELLRVSSQGQRCAAHALYGGIRWGENYPNVECLKIEPLD EECCCEEEEEECCCEEEECCCEEEEECCCCCHHHHHHHHCCCCCCCCCCCEEEEEEECCC GSASLFVNGIQYKGSVYIHKTERNCLFVVNELAIEDYLKSVLSVKYLKELDKEALSACVI CCCEEEEEEEEECCEEEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LERTALYERLLAGNANSFWHVNAQEDRYGGYGVTSQFYGVEEAVDWTSRLVLDNPEGLVF HHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCHHHCCHHHHHHHHHEEEEECCCCEEE NADYLLQSNVDRLAIEGYNARQILEKFYKDADLVVIESWEDNNRGV ECHHHHHCCCCEEEECCCCHHHHHHHHHCCCCEEEEECCCCCCCCC >Mature Secondary Structure MNILTGTQRTSREKKKVKKLNLLVLLGVFCGVGAVGDADVKVSDALSQSILSEPRIRVLL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHCCCCEEEEE LSESTTALVEAKGAFSVFGDGELLRVSSQGQRCAAHALYGGIRWGENYPNVECLKIEPLD EECCCEEEEEECCCEEEECCCEEEEECCCCCHHHHHHHHCCCCCCCCCCCEEEEEEECCC GSASLFVNGIQYKGSVYIHKTERNCLFVVNELAIEDYLKSVLSVKYLKELDKEALSACVI CCCEEEEEEEEECCEEEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LERTALYERLLAGNANSFWHVNAQEDRYGGYGVTSQFYGVEEAVDWTSRLVLDNPEGLVF HHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCHHHCCHHHHHHHHHEEEEECCCCEEE NADYLLQSNVDRLAIEGYNARQILEKFYKDADLVVIESWEDNNRGV ECHHHHHCCCCEEEECCCCHHHHHHHHHCCCCEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10684935