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The map label for this gene is dcd

Identifier: 15834929

GI number: 15834929

Start: 365162

End: 365734

Strand: Reverse

Name: dcd

Synonym: TC0309

Alternate gene names: 15834929

Gene position: 365734-365162 (Counterclockwise)

Preceding gene: 15834932

Following gene: 15834928

Centisome position: 34.09

GC content: 38.92

Gene sequence:

>573_bases
ATGGGGATTAAAGAAGACAACTGGATTCGCAAAATGGCAATTGAAGAGGGTATGATAGAGCCATTTGCTGATAATCAAGT
AAAAGTACATCCAGAAACTGGAGAAAAACTCATTAGTTATGGCTTGTCCAGTTACGGATATGATTTACGTATCTCTAGAG
AATTTAAAGTCTTTACCAATATATACAATTCCCTAGTTGATCCGAAATGTTTCACAGAAGACGCTTTGATTTCCATCGTG
GATGATGTTTGTATTATTCCTCCTAATTCTTTTGCCTTGGCTCGCAGCGTAGAATATTTCCGAATCCCTCGCAATGTTCT
TACCGTTTGCATAGGAAAATCGACTTATGCACGCTGTGGACTTATTGTAAACGTCACCCCCTTTGAACCCGAATGGGAAG
GATATGTGACCATCGAAATTTCTAATACCACTCCACTACCTGCAAAAATTTATGCTAATGAGGGAATTGCTCAAGTTCTT
TTCTTTGAAGGAGACTCCGCATGTGATGTTTCTTACGCAGATCGCCAAGGGAAATATCAAAAACAACAAGGCATTACAGT
TCCTTTTGTGTAA

Upstream 100 bases:

>100_bases
TTCATACAATTGCACATGCTGTAGTGTTGAGAGTTCCGGCTCTTTTTTCTAACTACAATCGTTCCTAAAATACAGGCATA
AAAAATAATCGAGAGAAGTT

Downstream 100 bases:

>100_bases
GCCCTATCTTCCTGGACTAATATGGTAAGTAAAAAACAGACTTCTTGGTTCGGGTATGTTGAAGAAATTGTCATTCGCTC
TTGGTGGCTCATTCTTTATC

Product: deoxycytidine triphosphate deaminase

Products: NA

Alternate protein names: dCTP deaminase

Number of amino acids: Translated: 190; Mature: 189

Protein sequence:

>190_residues
MGIKEDNWIRKMAIEEGMIEPFADNQVKVHPETGEKLISYGLSSYGYDLRISREFKVFTNIYNSLVDPKCFTEDALISIV
DDVCIIPPNSFALARSVEYFRIPRNVLTVCIGKSTYARCGLIVNVTPFEPEWEGYVTIEISNTTPLPAKIYANEGIAQVL
FFEGDSACDVSYADRQGKYQKQQGITVPFV

Sequences:

>Translated_190_residues
MGIKEDNWIRKMAIEEGMIEPFADNQVKVHPETGEKLISYGLSSYGYDLRISREFKVFTNIYNSLVDPKCFTEDALISIV
DDVCIIPPNSFALARSVEYFRIPRNVLTVCIGKSTYARCGLIVNVTPFEPEWEGYVTIEISNTTPLPAKIYANEGIAQVL
FFEGDSACDVSYADRQGKYQKQQGITVPFV
>Mature_189_residues
GIKEDNWIRKMAIEEGMIEPFADNQVKVHPETGEKLISYGLSSYGYDLRISREFKVFTNIYNSLVDPKCFTEDALISIVD
DVCIIPPNSFALARSVEYFRIPRNVLTVCIGKSTYARCGLIVNVTPFEPEWEGYVTIEISNTTPLPAKIYANEGIAQVLF
FEGDSACDVSYADRQGKYQKQQGITVPFV

Specific function: De novo synthesis of thymidylate. [C]

COG id: COG0717

COG function: function code F; Deoxycytidine deaminase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dCTP deaminase family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): DCD_CHLMU (Q9PKZ9)

Other databases:

- EMBL:   AE002160
- PIR:   D81717
- RefSeq:   NP_296688.1
- ProteinModelPortal:   Q9PKZ9
- SMR:   Q9PKZ9
- GeneID:   1246352
- GenomeReviews:   AE002160_GR
- KEGG:   cmu:TC0309
- TIGR:   TC_0309
- HOGENOM:   HBG553199
- OMA:   NITVICI
- PhylomeDB:   Q9PKZ9
- ProtClustDB:   PRK00416
- BioCyc:   CMUR243161:TC_0309-MONOMER
- BRENDA:   3.5.4.13
- HAMAP:   MF_00146
- InterPro:   IPR011962
- InterPro:   IPR008180
- TIGRFAMs:   TIGR02274

Pfam domain/function: PF00692 dUTPase

EC number: =3.5.4.13

Molecular weight: Translated: 21414; Mature: 21282

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIKEDNWIRKMAIEEGMIEPFADNQVKVHPETGEKLISYGLSSYGYDLRISREFKVFTN
CCCCCCHHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHHHCCEEEEEECHHHHHHH
IYNSLVDPKCFTEDALISIVDDVCIIPPNSFALARSVEYFRIPRNVLTVCIGKSTYARCG
HHHHHCCCCCCCHHHHHHHHCCEEEECCCCHHHHHCHHHEECCHHHEEEEECCCCHHHCC
LIVNVTPFEPEWEGYVTIEISNTTPLPAKIYANEGIAQVLFFEGDSACDVSYADRQGKYQ
EEEEECCCCCCCCCEEEEEECCCCCCCEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCH
KQQGITVPFV
HHCCCCCCCC
>Mature Secondary Structure 
GIKEDNWIRKMAIEEGMIEPFADNQVKVHPETGEKLISYGLSSYGYDLRISREFKVFTN
CCCCCHHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHHHCCEEEEEECHHHHHHH
IYNSLVDPKCFTEDALISIVDDVCIIPPNSFALARSVEYFRIPRNVLTVCIGKSTYARCG
HHHHHCCCCCCCHHHHHHHHCCEEEECCCCHHHHHCHHHEECCHHHEEEEECCCCHHHCC
LIVNVTPFEPEWEGYVTIEISNTTPLPAKIYANEGIAQVLFFEGDSACDVSYADRQGKYQ
EEEEECCCCCCCCCEEEEEECCCCCCCEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCH
KQQGITVPFV
HHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10684935