Definition Chlamydia muridarum Nigg, complete genome.
Accession NC_002620
Length 1,072,950

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Identifier: 15834925

GI number: 15834925

Start: 362500

End: 363279

Strand: Direct

Name: Not Available

Synonym: TC0305

Alternate gene names: NA

Gene position: 362500-363279 (Clockwise)

Preceding gene: 15834924

Following gene: 15834930

Centisome position: 33.79

GC content: 43.59

Gene sequence:

>780_bases
TTGAATATGCAACGTATTTTAGTTTATTCAGACAAAGGAGTTTCTCCTTACTATTTACGTCATACTGTTCGTTGGCTGAA
ACAGGCTGCTTTTCCTTTCCAGATGGAAGTATGTCGTGTGAATGGGCAATTTCTCATCCACGAGCCTCTTTGGGAGGAGA
CTACCCAGCTTTTAGTTATCCCAGGAGGGGCAGATGTTCCCTATCATCATGTGTTGCATGGGTTAGGGACTGCCAGGATT
GATAATTATGTAAGAGAGGGGGGAGCGTATTTAGGGATTTGTGCAGGTGCATATTTTGGGTGCGCCCATTTTTCTTTTTT
AGAACCTAATGGTTCTCTATTGGTTGCTAAAAGAGATTTAGGCTTTTTCCCCGGTATGGCTAATGGCCCTGCCTATGACA
GTGCTTTTTCTTATACAAGCTCCTCTGGAGTTTTAGCTGCTTCATTACGTTTTACAGATTTCCCTGGAAAGAGCTTTGCG
CTCTTTAATGGAGGGTGTTACTTTGAGAATGCCGAAGATTTCTCAGAAGTGCGGGTAGAGGCGCGTTACAATGATCTTCC
AGGAAGTCCTGCGGCTATCATTTCTCGACGTCTTGATAGAGGCTTGGTGGTTCTTTCTGGGCCCCATATTGAATATCTTC
CAGAGTTCTGCTCGCTACAAGAAGAGAATGTTGTTCATGCTCGAGAGCAAATTGCAAAGAACTCTGCGGGGCTTGAAGAA
TATAAGCAGACTTTAATCAAACGTTTGTTAAGCAATGTCGTCGAGCACGTTTTGTATTAG

Upstream 100 bases:

>100_bases
AAAATATTTTTTTTATTGAATAGTTGACAATTTTCCATTTTGGTTAGAAGTAAACAAAGTTCGTTTTCTGGTACAATGAG
AAGAGGCTTGTTGTAAGGGA

Downstream 100 bases:

>100_bases
GGTTGCCTCGAATCTTTGAGGATGGGCTATCTCTGCTGTGAATAGGAACGGCTGCATTTGTCCTAATAGCCCTAGTTTGT
CTTCCTCTTCTAGTCCGGAA

Product: biotin apo-protein ligase-related protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MNMQRILVYSDKGVSPYYLRHTVRWLKQAAFPFQMEVCRVNGQFLIHEPLWEETTQLLVIPGGADVPYHHVLHGLGTARI
DNYVREGGAYLGICAGAYFGCAHFSFLEPNGSLLVAKRDLGFFPGMANGPAYDSAFSYTSSSGVLAASLRFTDFPGKSFA
LFNGGCYFENAEDFSEVRVEARYNDLPGSPAAIISRRLDRGLVVLSGPHIEYLPEFCSLQEENVVHAREQIAKNSAGLEE
YKQTLIKRLLSNVVEHVLY

Sequences:

>Translated_259_residues
MNMQRILVYSDKGVSPYYLRHTVRWLKQAAFPFQMEVCRVNGQFLIHEPLWEETTQLLVIPGGADVPYHHVLHGLGTARI
DNYVREGGAYLGICAGAYFGCAHFSFLEPNGSLLVAKRDLGFFPGMANGPAYDSAFSYTSSSGVLAASLRFTDFPGKSFA
LFNGGCYFENAEDFSEVRVEARYNDLPGSPAAIISRRLDRGLVVLSGPHIEYLPEFCSLQEENVVHAREQIAKNSAGLEE
YKQTLIKRLLSNVVEHVLY
>Mature_259_residues
MNMQRILVYSDKGVSPYYLRHTVRWLKQAAFPFQMEVCRVNGQFLIHEPLWEETTQLLVIPGGADVPYHHVLHGLGTARI
DNYVREGGAYLGICAGAYFGCAHFSFLEPNGSLLVAKRDLGFFPGMANGPAYDSAFSYTSSSGVLAASLRFTDFPGKSFA
LFNGGCYFENAEDFSEVRVEARYNDLPGSPAAIISRRLDRGLVVLSGPHIEYLPEFCSLQEENVVHAREQIAKNSAGLEE
YKQTLIKRLLSNVVEHVLY

Specific function: Unknown

COG id: COG4285

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the chlamydial CPn_0128/CT_035/TC_0305 family

Homologues:

Organism=Saccharomyces cerevisiae, GI6320060, Length=262, Percent_Identity=33.587786259542, Blast_Score=132, Evalue=5e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y305_CHLMU (Q9PL03)

Other databases:

- EMBL:   AE002160
- PIR:   H81716
- RefSeq:   NP_296684.1
- GeneID:   1246475
- GenomeReviews:   AE002160_GR
- KEGG:   cmu:TC0305
- TIGR:   TC_0305
- HOGENOM:   HBG402714
- OMA:   ENTKDTE
- ProtClustDB:   CLSK871147
- BioCyc:   CMUR243161:TC_0305-MONOMER
- InterPro:   IPR019197
- InterPro:   IPR015834
- PIRSF:   PIRSF016642

Pfam domain/function: PF09825 BPL_N

EC number: NA

Molecular weight: Translated: 28881; Mature: 28881

Theoretical pI: Translated: 6.42; Mature: 6.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNMQRILVYSDKGVSPYYLRHTVRWLKQAAFPFQMEVCRVNGQFLIHEPLWEETTQLLVI
CCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEEEECCEEEEECCCCCCCCEEEEE
PGGADVPYHHVLHGLGTARIDNYVREGGAYLGICAGAYFGCAHFSFLEPNGSLLVAKRDL
ECCCCCCHHHHHHHCCHHHHHHHHHHCCCEEEEHHHHHHHHHHEEEECCCCCEEEEECCC
GFFPGMANGPAYDSAFSYTSSSGVLAASLRFTDFPGKSFALFNGGCYFENAEDFSEVRVE
CCCCCCCCCCCCCCHHCCCCCCCEEEEEEEEECCCCCEEEEEECCEEECCCCCHHHHEEE
ARYNDLPGSPAAIISRRLDRGLVVLSGPHIEYLPEFCSLQEENVVHAREQIAKNSAGLEE
EECCCCCCCHHHHHHHHHCCCEEEEECCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHH
YKQTLIKRLLSNVVEHVLY
HHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNMQRILVYSDKGVSPYYLRHTVRWLKQAAFPFQMEVCRVNGQFLIHEPLWEETTQLLVI
CCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEEEECCEEEEECCCCCCCCEEEEE
PGGADVPYHHVLHGLGTARIDNYVREGGAYLGICAGAYFGCAHFSFLEPNGSLLVAKRDL
ECCCCCCHHHHHHHCCHHHHHHHHHHCCCEEEEHHHHHHHHHHEEEECCCCCEEEEECCC
GFFPGMANGPAYDSAFSYTSSSGVLAASLRFTDFPGKSFALFNGGCYFENAEDFSEVRVE
CCCCCCCCCCCCCCHHCCCCCCCEEEEEEEEECCCCCEEEEEECCEEECCCCCHHHHEEE
ARYNDLPGSPAAIISRRLDRGLVVLSGPHIEYLPEFCSLQEENVVHAREQIAKNSAGLEE
EECCCCCCCHHHHHHHHHCCCEEEEECCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHH
YKQTLIKRLLSNVVEHVLY
HHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10684935