| Definition | Chlamydia muridarum Nigg, complete genome. |
|---|---|
| Accession | NC_002620 |
| Length | 1,072,950 |
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Identifier: 15834925
GI number: 15834925
Start: 362500
End: 363279
Strand: Direct
Name: Not Available
Synonym: TC0305
Alternate gene names: NA
Gene position: 362500-363279 (Clockwise)
Preceding gene: 15834924
Following gene: 15834930
Centisome position: 33.79
GC content: 43.59
Gene sequence:
>780_bases TTGAATATGCAACGTATTTTAGTTTATTCAGACAAAGGAGTTTCTCCTTACTATTTACGTCATACTGTTCGTTGGCTGAA ACAGGCTGCTTTTCCTTTCCAGATGGAAGTATGTCGTGTGAATGGGCAATTTCTCATCCACGAGCCTCTTTGGGAGGAGA CTACCCAGCTTTTAGTTATCCCAGGAGGGGCAGATGTTCCCTATCATCATGTGTTGCATGGGTTAGGGACTGCCAGGATT GATAATTATGTAAGAGAGGGGGGAGCGTATTTAGGGATTTGTGCAGGTGCATATTTTGGGTGCGCCCATTTTTCTTTTTT AGAACCTAATGGTTCTCTATTGGTTGCTAAAAGAGATTTAGGCTTTTTCCCCGGTATGGCTAATGGCCCTGCCTATGACA GTGCTTTTTCTTATACAAGCTCCTCTGGAGTTTTAGCTGCTTCATTACGTTTTACAGATTTCCCTGGAAAGAGCTTTGCG CTCTTTAATGGAGGGTGTTACTTTGAGAATGCCGAAGATTTCTCAGAAGTGCGGGTAGAGGCGCGTTACAATGATCTTCC AGGAAGTCCTGCGGCTATCATTTCTCGACGTCTTGATAGAGGCTTGGTGGTTCTTTCTGGGCCCCATATTGAATATCTTC CAGAGTTCTGCTCGCTACAAGAAGAGAATGTTGTTCATGCTCGAGAGCAAATTGCAAAGAACTCTGCGGGGCTTGAAGAA TATAAGCAGACTTTAATCAAACGTTTGTTAAGCAATGTCGTCGAGCACGTTTTGTATTAG
Upstream 100 bases:
>100_bases AAAATATTTTTTTTATTGAATAGTTGACAATTTTCCATTTTGGTTAGAAGTAAACAAAGTTCGTTTTCTGGTACAATGAG AAGAGGCTTGTTGTAAGGGA
Downstream 100 bases:
>100_bases GGTTGCCTCGAATCTTTGAGGATGGGCTATCTCTGCTGTGAATAGGAACGGCTGCATTTGTCCTAATAGCCCTAGTTTGT CTTCCTCTTCTAGTCCGGAA
Product: biotin apo-protein ligase-related protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 259; Mature: 259
Protein sequence:
>259_residues MNMQRILVYSDKGVSPYYLRHTVRWLKQAAFPFQMEVCRVNGQFLIHEPLWEETTQLLVIPGGADVPYHHVLHGLGTARI DNYVREGGAYLGICAGAYFGCAHFSFLEPNGSLLVAKRDLGFFPGMANGPAYDSAFSYTSSSGVLAASLRFTDFPGKSFA LFNGGCYFENAEDFSEVRVEARYNDLPGSPAAIISRRLDRGLVVLSGPHIEYLPEFCSLQEENVVHAREQIAKNSAGLEE YKQTLIKRLLSNVVEHVLY
Sequences:
>Translated_259_residues MNMQRILVYSDKGVSPYYLRHTVRWLKQAAFPFQMEVCRVNGQFLIHEPLWEETTQLLVIPGGADVPYHHVLHGLGTARI DNYVREGGAYLGICAGAYFGCAHFSFLEPNGSLLVAKRDLGFFPGMANGPAYDSAFSYTSSSGVLAASLRFTDFPGKSFA LFNGGCYFENAEDFSEVRVEARYNDLPGSPAAIISRRLDRGLVVLSGPHIEYLPEFCSLQEENVVHAREQIAKNSAGLEE YKQTLIKRLLSNVVEHVLY >Mature_259_residues MNMQRILVYSDKGVSPYYLRHTVRWLKQAAFPFQMEVCRVNGQFLIHEPLWEETTQLLVIPGGADVPYHHVLHGLGTARI DNYVREGGAYLGICAGAYFGCAHFSFLEPNGSLLVAKRDLGFFPGMANGPAYDSAFSYTSSSGVLAASLRFTDFPGKSFA LFNGGCYFENAEDFSEVRVEARYNDLPGSPAAIISRRLDRGLVVLSGPHIEYLPEFCSLQEENVVHAREQIAKNSAGLEE YKQTLIKRLLSNVVEHVLY
Specific function: Unknown
COG id: COG4285
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chlamydial CPn_0128/CT_035/TC_0305 family
Homologues:
Organism=Saccharomyces cerevisiae, GI6320060, Length=262, Percent_Identity=33.587786259542, Blast_Score=132, Evalue=5e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y305_CHLMU (Q9PL03)
Other databases:
- EMBL: AE002160 - PIR: H81716 - RefSeq: NP_296684.1 - GeneID: 1246475 - GenomeReviews: AE002160_GR - KEGG: cmu:TC0305 - TIGR: TC_0305 - HOGENOM: HBG402714 - OMA: ENTKDTE - ProtClustDB: CLSK871147 - BioCyc: CMUR243161:TC_0305-MONOMER - InterPro: IPR019197 - InterPro: IPR015834 - PIRSF: PIRSF016642
Pfam domain/function: PF09825 BPL_N
EC number: NA
Molecular weight: Translated: 28881; Mature: 28881
Theoretical pI: Translated: 6.42; Mature: 6.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNMQRILVYSDKGVSPYYLRHTVRWLKQAAFPFQMEVCRVNGQFLIHEPLWEETTQLLVI CCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEEEECCEEEEECCCCCCCCEEEEE PGGADVPYHHVLHGLGTARIDNYVREGGAYLGICAGAYFGCAHFSFLEPNGSLLVAKRDL ECCCCCCHHHHHHHCCHHHHHHHHHHCCCEEEEHHHHHHHHHHEEEECCCCCEEEEECCC GFFPGMANGPAYDSAFSYTSSSGVLAASLRFTDFPGKSFALFNGGCYFENAEDFSEVRVE CCCCCCCCCCCCCCHHCCCCCCCEEEEEEEEECCCCCEEEEEECCEEECCCCCHHHHEEE ARYNDLPGSPAAIISRRLDRGLVVLSGPHIEYLPEFCSLQEENVVHAREQIAKNSAGLEE EECCCCCCCHHHHHHHHHCCCEEEEECCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHH YKQTLIKRLLSNVVEHVLY HHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNMQRILVYSDKGVSPYYLRHTVRWLKQAAFPFQMEVCRVNGQFLIHEPLWEETTQLLVI CCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEEEECCEEEEECCCCCCCCEEEEE PGGADVPYHHVLHGLGTARIDNYVREGGAYLGICAGAYFGCAHFSFLEPNGSLLVAKRDL ECCCCCCHHHHHHHCCHHHHHHHHHHCCCEEEEHHHHHHHHHHEEEECCCCCEEEEECCC GFFPGMANGPAYDSAFSYTSSSGVLAASLRFTDFPGKSFALFNGGCYFENAEDFSEVRVE CCCCCCCCCCCCCCHHCCCCCCCEEEEEEEEECCCCCEEEEEECCEEECCCCCHHHHEEE ARYNDLPGSPAAIISRRLDRGLVVLSGPHIEYLPEFCSLQEENVVHAREQIAKNSAGLEE EECCCCCCCHHHHHHHHHCCCEEEEECCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHH YKQTLIKRLLSNVVEHVLY HHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10684935