| Definition | Chlamydia muridarum Nigg, complete genome. |
|---|---|
| Accession | NC_002620 |
| Length | 1,072,950 |
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Identifier: 15834923
GI number: 15834923
Start: 361133
End: 362158
Strand: Reverse
Name: Not Available
Synonym: TC0303
Alternate gene names: 15834923
Gene position: 362158-361133 (Counterclockwise)
Preceding gene: 15834926
Following gene: 15834922
Centisome position: 33.75
GC content: 38.3
Gene sequence:
>1026_bases ATGATGTCCTACCATAGTCCGATGTCAACCTCTCGTAATACACCTTTAGGCATCTTCTATAGCTTATTGGCCTGTTTCTA TTGGAGCATTGTTTTTGTGATCCCTAGTATGCTAGGGAACTTTCCCGACCTAGATATTGTACTTACTCGATATTCCGTTT TTGGGATCTGTTCGTTAGTTACTATTCTTTATAAACGTTCCAATATTTTCAAAACCGTTCCTTTTTCCCTCTGGAAAACC AGCTTGTTCTGGGCTTTTCTTATTAACATTGTATATTATTTTTGCATTGCGCAATCCGTCCGCTATTCAGGAGCTGCAAT TACAGTGATTATTGCAGGATTAGCTCCCATTACCATCCTTTTTTATTCTAATTTAAAAAAAAAGGTGCTCTCTTATCCTT TTCTTCTAAGTATGAGCGGCATTATCATCATTGGAATCATCCTATCCAATCTTTCAGAATTTCAATCCAATTCAAGTTCC TCCCCTCTTCTCTATCTTTTTGGACTGGTATGTGTAACAATAGCTACTAGCATTTGGGCGGGATACATCATATGTAATCA TGATTTTCTAGAGAGATATTCAGAAATTTCTCCTGAAACTTGGTGCCATATGCTGGGTATTAGCTCTCTTATCATTAGCC TCCCCCTGATCATCTTAGGAGATAGCTTTGGCATCACCCATGTGACCCAAGATTTTCTATTTCACATTCCTGTTTCTGAA AGATATTTATTCATTCTTCTCTGCGCCGCTATGGGTATTTTTTCATCTTCCCGAGCGATTTCGGCTTGGAATAAAGCTTC CCTCCACCTATCTACAGCGTTATTAGGAGCTCTTCTTATCTTTGAACCACTCTTTGGCTGGATCCTCTCTTATGTATGCA AACAAGAAATTCCATCATTCCAAGAAGGATTAGGATTCTCTTTAATGCTAGGAGCCAGTCTCTGTCTTCTTTTTGCACAG AAAAAAGCCAATGAACGAGAAGATTCTGAAAAAACTTTCGTAGTTACAGAACTTGATTCGAACTAA
Upstream 100 bases:
>100_bases ACCAACTCTTTTTGTCTTTATCTGACTTTCGTCCTCACTAGTCCCCTGTTTTTAGTAATATCTTAGTAATATAACGTTTA AGCTGGAGATCCGATAAAGC
Downstream 100 bases:
>100_bases GTTTTCCATTCTTCTTGGTTACACCTCCCCTAAAGTTATCTTTTCTTCTTGGGAGGTGTCTTCTCTTCTTTATCTAACAG CTCTAAAATCTCTAAAAACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 341; Mature: 341
Protein sequence:
>341_residues MMSYHSPMSTSRNTPLGIFYSLLACFYWSIVFVIPSMLGNFPDLDIVLTRYSVFGICSLVTILYKRSNIFKTVPFSLWKT SLFWAFLINIVYYFCIAQSVRYSGAAITVIIAGLAPITILFYSNLKKKVLSYPFLLSMSGIIIIGIILSNLSEFQSNSSS SPLLYLFGLVCVTIATSIWAGYIICNHDFLERYSEISPETWCHMLGISSLIISLPLIILGDSFGITHVTQDFLFHIPVSE RYLFILLCAAMGIFSSSRAISAWNKASLHLSTALLGALLIFEPLFGWILSYVCKQEIPSFQEGLGFSLMLGASLCLLFAQ KKANEREDSEKTFVVTELDSN
Sequences:
>Translated_341_residues MMSYHSPMSTSRNTPLGIFYSLLACFYWSIVFVIPSMLGNFPDLDIVLTRYSVFGICSLVTILYKRSNIFKTVPFSLWKT SLFWAFLINIVYYFCIAQSVRYSGAAITVIIAGLAPITILFYSNLKKKVLSYPFLLSMSGIIIIGIILSNLSEFQSNSSS SPLLYLFGLVCVTIATSIWAGYIICNHDFLERYSEISPETWCHMLGISSLIISLPLIILGDSFGITHVTQDFLFHIPVSE RYLFILLCAAMGIFSSSRAISAWNKASLHLSTALLGALLIFEPLFGWILSYVCKQEIPSFQEGLGFSLMLGASLCLLFAQ KKANEREDSEKTFVVTELDSN >Mature_341_residues MMSYHSPMSTSRNTPLGIFYSLLACFYWSIVFVIPSMLGNFPDLDIVLTRYSVFGICSLVTILYKRSNIFKTVPFSLWKT SLFWAFLINIVYYFCIAQSVRYSGAAITVIIAGLAPITILFYSNLKKKVLSYPFLLSMSGIIIIGIILSNLSEFQSNSSS SPLLYLFGLVCVTIATSIWAGYIICNHDFLERYSEISPETWCHMLGISSLIISLPLIILGDSFGITHVTQDFLFHIPVSE RYLFILLCAAMGIFSSSRAISAWNKASLHLSTALLGALLIFEPLFGWILSYVCKQEIPSFQEGLGFSLMLGASLCLLFAQ KKANEREDSEKTFVVTELDSN
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DUF6 domain [H]
Homologues:
Organism=Escherichia coli, GI226510990, Length=323, Percent_Identity=25.6965944272446, Blast_Score=109, Evalue=2e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 38141; Mature: 38141
Theoretical pI: Translated: 7.38; Mature: 7.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMSYHSPMSTSRNTPLGIFYSLLACFYWSIVFVIPSMLGNFPDLDIVLTRYSVFGICSLV CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH TILYKRSNIFKTVPFSLWKTSLFWAFLINIVYYFCIAQSVRYSGAAITVIIAGLAPITIL HHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH FYSNLKKKVLSYPFLLSMSGIIIIGIILSNLSEFQSNSSSSPLLYLFGLVCVTIATSIWA HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH GYIICNHDFLERYSEISPETWCHMLGISSLIISLPLIILGDSFGITHVTQDFLFHIPVSE HHHEECHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHEECCCCH RYLFILLCAAMGIFSSSRAISAWNKASLHLSTALLGALLIFEPLFGWILSYVCKQEIPSF HHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH QEGLGFSLMLGASLCLLFAQKKANEREDSEKTFVVTELDSN HHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCC >Mature Secondary Structure MMSYHSPMSTSRNTPLGIFYSLLACFYWSIVFVIPSMLGNFPDLDIVLTRYSVFGICSLV CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH TILYKRSNIFKTVPFSLWKTSLFWAFLINIVYYFCIAQSVRYSGAAITVIIAGLAPITIL HHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH FYSNLKKKVLSYPFLLSMSGIIIIGIILSNLSEFQSNSSSSPLLYLFGLVCVTIATSIWA HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH GYIICNHDFLERYSEISPETWCHMLGISSLIISLPLIILGDSFGITHVTQDFLFHIPVSE HHHEECHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHEECCCCH RYLFILLCAAMGIFSSSRAISAWNKASLHLSTALLGALLIFEPLFGWILSYVCKQEIPSF HHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH QEGLGFSLMLGASLCLLFAQKKANEREDSEKTFVVTELDSN HHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503 [H]