| Definition | Chlamydia muridarum Nigg, complete genome. |
|---|---|
| Accession | NC_002620 |
| Length | 1,072,950 |
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Identifier: 15834905
GI number: 15834905
Start: 340670
End: 342010
Strand: Direct
Name: Not Available
Synonym: TC0285
Alternate gene names: NA
Gene position: 340670-342010 (Clockwise)
Preceding gene: 15834904
Following gene: 15834907
Centisome position: 31.75
GC content: 42.13
Gene sequence:
>1341_bases GTGCGAACGTTGTCTATTTCTATGCTCATTCTTGCCCTTTCTTGTGGGGAAAACACCTGCTTATGTGCTGCGGATTCCCC CAAAGCGAAAGTTGATGCTTCCATCGGTAATGGGGCAAGTTTTTCTCCATTTACAGGAGAAATCAAAGGAAATCGTGTGC GTCTACGTCTGGCTCCACACACGGATAGTTCTATCATCAAAGAATTATCTAAAGGTGACTGCCTGGCTGTTTTAGGAGAA AGCAAGGACTATTATGTAGTGGCTGCTCCTGAAGGGGTTAGGGGTTATGTGTTCCGCACTTTCGTTTTAGATAATGTTAT TGAAGGGGAGAAGGTTAACGTTCGTTTGGAACCTTCGACTTCCGCACCTATTTTAGCAAGATTATCCAAAGGAACTGTTG TGAAAACCTTGGGTGCTGCGCAGGGGAAATGGGTGGAAATTGCTCTTCCTAAGCAGTGTGTCTTCTATGTTGCTAAGAAT TTCGTCAAAAATGTGGGTGCTTTAGAGCTATACAATCAGAAAGAAGGGCAGAAGAAAATCGCTTTAGACTTGTTAAATTC TGCTATGAGTTTCGCTGATGCTGAGTTGCAGAAAAAGGTAGAAGACATTGATCTAGATGCCATTTATAAGAAAATGAATC TAGCTCAGGCAGAAGAGTTTAAAGATGTTCCCGGGTTACAACCTTTAGTACAGAAGGCTTTGGAAAGAGTTCAGGAAGCT TTTCTTGCAAAGTCCTTGGAAAAGGGCTCACACAAAACTGTAGAATCCTACAAACCTGTGGAAACTCAAGCTCAATTACA GCCACAGCGTCAGGTTATAGAAGAAAAGAATGTGTCGGTGGTTCCAGAGGCGCCGGTTTTGTCGCAAGTAGAAGAGCCGA AGAGTGTCCTAACTTCCTCTAGTGAAGTAGAACCTTTGCAGGACGTTGGTCCTATAAAAGGTTCGCTGTTATCTCATTAT ATTCGTAAAAAGGGATTTGTTAAGACTTCTCCTGTGGTAGAAGGGAGAGAGAGCTTTGAACGATCTTTGTTTGAGGTTTG GGTAAATCTTCAACCTGAAGAGATTCGAAATGGACTGACTATGGAGTCTTTCTATAGAGATGAGCAGAAGAAAAAACGGG TGCTGACCGGGGAACTTGAGGTATATCCTCATATCGTTAAAAATAATCCAGGTGATTATCTTTTGAAAAATGGAGAAGAT GTAGTGGCATTTGTTTACGCCACGAGTATTGATTTAAGTAAATGGCTAGGGAAACGTGTGGTTTTAGAATGCGTTTCTAG GCCGAATAATCACTTTGCCTTTCCTGCCTATATTGTTTTGTCGATAAAAGAGGGCGCTTGA
Upstream 100 bases:
>100_bases TTTAAGTCAATAATAATCTCCCTCTCTAGGGGTCTCGTCTTCTAGGGCTGCGGATGCCTATGTAGAGGCCTGGTTTTTAG CAAATTGCAGGAGTTTTTGC
Downstream 100 bases:
>100_bases TTGAGCTAAGAAAGCCTTGCTTTTTCTAAGAAGCAAGGCTTTTTGAGTTATTCAAAAGCTGTTTGGTGTTTCAACAAAGT GGTGTTTAGGAAAAGGTATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 446; Mature: 446
Protein sequence:
>446_residues MRTLSISMLILALSCGENTCLCAADSPKAKVDASIGNGASFSPFTGEIKGNRVRLRLAPHTDSSIIKELSKGDCLAVLGE SKDYYVVAAPEGVRGYVFRTFVLDNVIEGEKVNVRLEPSTSAPILARLSKGTVVKTLGAAQGKWVEIALPKQCVFYVAKN FVKNVGALELYNQKEGQKKIALDLLNSAMSFADAELQKKVEDIDLDAIYKKMNLAQAEEFKDVPGLQPLVQKALERVQEA FLAKSLEKGSHKTVESYKPVETQAQLQPQRQVIEEKNVSVVPEAPVLSQVEEPKSVLTSSSEVEPLQDVGPIKGSLLSHY IRKKGFVKTSPVVEGRESFERSLFEVWVNLQPEEIRNGLTMESFYRDEQKKKRVLTGELEVYPHIVKNNPGDYLLKNGED VVAFVYATSIDLSKWLGKRVVLECVSRPNNHFAFPAYIVLSIKEGA
Sequences:
>Translated_446_residues MRTLSISMLILALSCGENTCLCAADSPKAKVDASIGNGASFSPFTGEIKGNRVRLRLAPHTDSSIIKELSKGDCLAVLGE SKDYYVVAAPEGVRGYVFRTFVLDNVIEGEKVNVRLEPSTSAPILARLSKGTVVKTLGAAQGKWVEIALPKQCVFYVAKN FVKNVGALELYNQKEGQKKIALDLLNSAMSFADAELQKKVEDIDLDAIYKKMNLAQAEEFKDVPGLQPLVQKALERVQEA FLAKSLEKGSHKTVESYKPVETQAQLQPQRQVIEEKNVSVVPEAPVLSQVEEPKSVLTSSSEVEPLQDVGPIKGSLLSHY IRKKGFVKTSPVVEGRESFERSLFEVWVNLQPEEIRNGLTMESFYRDEQKKKRVLTGELEVYPHIVKNNPGDYLLKNGED VVAFVYATSIDLSKWLGKRVVLECVSRPNNHFAFPAYIVLSIKEGA >Mature_446_residues MRTLSISMLILALSCGENTCLCAADSPKAKVDASIGNGASFSPFTGEIKGNRVRLRLAPHTDSSIIKELSKGDCLAVLGE SKDYYVVAAPEGVRGYVFRTFVLDNVIEGEKVNVRLEPSTSAPILARLSKGTVVKTLGAAQGKWVEIALPKQCVFYVAKN FVKNVGALELYNQKEGQKKIALDLLNSAMSFADAELQKKVEDIDLDAIYKKMNLAQAEEFKDVPGLQPLVQKALERVQEA FLAKSLEKGSHKTVESYKPVETQAQLQPQRQVIEEKNVSVVPEAPVLSQVEEPKSVLTSSSEVEPLQDVGPIKGSLLSHY IRKKGFVKTSPVVEGRESFERSLFEVWVNLQPEEIRNGLTMESFYRDEQKKKRVLTGELEVYPHIVKNNPGDYLLKNGED VVAFVYATSIDLSKWLGKRVVLECVSRPNNHFAFPAYIVLSIKEGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49318; Mature: 49318
Theoretical pI: Translated: 7.80; Mature: 7.80
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTLSISMLILALSCGENTCLCAADSPKAKVDASIGNGASFSPFTGEIKGNRVRLRLAPH CCEEHEEEEEEEEECCCCEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEEECCC TDSSIIKELSKGDCLAVLGESKDYYVVAAPEGVRGYVFRTFVLDNVIEGEKVNVRLEPST CCHHHHHHHCCCCEEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCC SAPILARLSKGTVVKTLGAAQGKWVEIALPKQCVFYVAKNFVKNVGALELYNQKEGQKKI CCCHHHHCCCCCEEEECCCCCCCEEEEECCHHHHHHHHHHHHHCCCCEEEECCCCCHHHH ALDLLNSAMSFADAELQKKVEDIDLDAIYKKMNLAQAEEFKDVPGLQPLVQKALERVQEA HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH FLAKSLEKGSHKTVESYKPVETQAQLQPQRQVIEEKNVSVVPEAPVLSQVEEPKSVLTSS HHHHHHHCCCCCCHHCCCCCCHHHHCCHHHHHHHHCCCEECCCCHHHHHHHHHHHHHCCC SEVEPLQDVGPIKGSLLSHYIRKKGFVKTSPVVEGRESFERSLFEVWVNLQPEEIRNGLT CCCCCHHHCCCCHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHHHCCCHHHHHCCCC MESFYRDEQKKKRVLTGELEVYPHIVKNNPGDYLLKNGEDVVAFVYATSIDLSKWLGKRV HHHHHHHHHHHHCEECCCCEEEEEEECCCCCCEEEECCCCEEEEEEEECCCHHHHHHHHH VLECVSRPNNHFAFPAYIVLSIKEGA HHHHHCCCCCCEEEEEEEEEEEECCC >Mature Secondary Structure MRTLSISMLILALSCGENTCLCAADSPKAKVDASIGNGASFSPFTGEIKGNRVRLRLAPH CCEEHEEEEEEEEECCCCEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEEECCC TDSSIIKELSKGDCLAVLGESKDYYVVAAPEGVRGYVFRTFVLDNVIEGEKVNVRLEPST CCHHHHHHHCCCCEEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCC SAPILARLSKGTVVKTLGAAQGKWVEIALPKQCVFYVAKNFVKNVGALELYNQKEGQKKI CCCHHHHCCCCCEEEECCCCCCCEEEEECCHHHHHHHHHHHHHCCCCEEEECCCCCHHHH ALDLLNSAMSFADAELQKKVEDIDLDAIYKKMNLAQAEEFKDVPGLQPLVQKALERVQEA HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH FLAKSLEKGSHKTVESYKPVETQAQLQPQRQVIEEKNVSVVPEAPVLSQVEEPKSVLTSS HHHHHHHCCCCCCHHCCCCCCHHHHCCHHHHHHHHCCCEECCCCHHHHHHHHHHHHHCCC SEVEPLQDVGPIKGSLLSHYIRKKGFVKTSPVVEGRESFERSLFEVWVNLQPEEIRNGLT CCCCCHHHCCCCHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHHHCCCHHHHHCCCC MESFYRDEQKKKRVLTGELEVYPHIVKNNPGDYLLKNGEDVVAFVYATSIDLSKWLGKRV HHHHHHHHHHHHCEECCCCEEEEEEECCCCCCEEEECCCCEEEEEEEECCCHHHHHHHHH VLECVSRPNNHFAFPAYIVLSIKEGA HHHHHCCCCCCEEEEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA