| Definition | Chlamydia muridarum Nigg, complete genome. |
|---|---|
| Accession | NC_002620 |
| Length | 1,072,950 |
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Identifier: 15834888
GI number: 15834888
Start: 321597
End: 323441
Strand: Direct
Name: Not Available
Synonym: TC0268
Alternate gene names: NA
Gene position: 321597-323441 (Clockwise)
Preceding gene: 15834886
Following gene: 15834890
Centisome position: 29.97
GC content: 42.93
Gene sequence:
>1845_bases TTGTTTTATTTTTTAGGTTGGTTTGTTATGGGCATCAAGGGAGTAGGCGGTAGCGGTCATAGCGATTATCCAATCCCTTC TCATAATGGAGATGGGGAGAGTGAAAAAAACAGCTCAGATTCAACAAGTAGTAAGGTTAATGCAAAAGTTACTTCTTCCT TACAGGGGGCTCCGTCAACGAATGATGAAAATTCAGTTTCCCCTTATTCTGTGGTGGATGTCACTGATTTAATAGAGAGC GGAGAGTCTTCTAGGCATGTAATAAAGAAATCTATAGAAACAGAAGAAGCTGCTCATCGAGAATCTAGTGTAGAGGGGGC TGGGCATTCTTCTCGCGGAATATTTGGACGGTTGCAAGCAGGATTAGGACGTCTGGCTAGAAGAGTGGGGGAAGCTGTCA GAAATACTGTAGGCTCTATCTTTCCACAAAGAGCTGGTGCTGAGCAAAGAACAGGCAAAGCTCGGACAAAATATTCCCCT TCAGCATCAAGAGGATTACGCCTCATGTTCACAGACTTCTGGCGATATCGAGTTTTGCATCGGAATCCTCCTATGGATGG ACTTTTTGCAAAGCTTGATGCCGATGAGGCTGAAGATATGGCAGCTTACACGAAAGAGTATGTTAGCAATCTAGAAAAAC GAGGAGCAGCTGATCGAGAAACTATAGAACACTGTCAAATGGTAGCTAAAAATTGGGAAAAAAGAGCTAGAGATTTGCGA GACATGGGGGCCGCAAAAAAATTTTTACGCGACCCTTTTGGTAAGAGTGATCCTAAGTATAAGGGGACACTGCCTGGAGA ATACACTGTCGGAAATACCATGTTTTACGATGGACCAGGTGTGAGCAAACTATCAGAGGTTGATACAGGTTTTTGGTTGG ACATGGAGAAGCTCTCGGATGCTGTCTTGTCTGCAAATATTCAAAAAGGGCTTCGAGCTCGATTTGTTTTAAATCAGTCT ATTCCACAGTTAGAGAGTCTAGAAGAGCGTTTTAGAAAACTGGAGAGTGCTTGCGATGAGGCTCGTGCTTCGTTAAAGGA AGCAGGTTGGATAAAAGAAGGCAAGGAACCTAACAAAGCGCAACGAGCTTTTCGGCGATTTGTAGAAGAAAGCCGGAATC TAGAGCTTTCTTTTGGTAGTTTTGGAGAAAGTGCTCGTCGTCTTTCCGCTCGTGTTTCCCAAGGTTTAGCTGCTGCAGGG GAGGCAATTCGCCGCTGCTTTGATTGTCGCAAAGGCAAATATTCCCTTAAAAAGGACTTGTCTTCTGAAGAATTAAATTT GGCAGAAGAGTTAATTAGGTTTACTGATGAGATGGGGATAGAGAGAGACCCAGATGGAAATTACAATATTCCTTGGGTAG AAAACTGGAGAACAGGAGTTCCTGTTATTGAAGGAGAAGGGGCAGAACATATTTATGAAACGATGATGCCTGTCCAGGAA TCTTTTGAGCAGGTTTATGAAGTTATGGATATGGGATTGGAAGAGCGTAGGGATTTTGCTGTGAGTCAACAACACTATCA AGTTCCTCCTAGATCTTCGTTGAATTACGAGACTCCGCGATTCAGAGAATATGACGTTCCACGTAATTCCGCTCGTTCTT ATTACGATGTTCCAAGAGTACCTCCCCAAAATGAGGTAGAAGAGATGCATGTGACTAAAGGAATGAGGAGTTCTGTGTAT GCTTGTTTTGTAGCAGGAATGCGCAACTACATTGTTTCACAGCCACAAGAACAGATTCCAAATTCTGAACAGGTGGAGCA GCTTTTCCAAGAGCTTATTAACGATGGGGATCAGATAATTCAAGAGCTTATGAAGATATGGAATGAGGAACTAGATAATC AATAA
Upstream 100 bases:
>100_bases CTATAAAATTAAACGATTTGTTTTGTTGATCAAGTTTTATTAAAAAATAATTTATTTTTCCTTCGTTTTTTTTAATTCCA ATTTTAAAATTAAAATAAGT
Downstream 100 bases:
>100_bases ACACTTTTGTTAATGAAGAAAACAAAGCCCCCCAGAGAATTTCTTTGGAGGGCTTTGTTTTATAAAAAACTCGTGCTTCA AATTACACGCAAAAATCAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 614; Mature: 614
Protein sequence:
>614_residues MFYFLGWFVMGIKGVGGSGHSDYPIPSHNGDGESEKNSSDSTSSKVNAKVTSSLQGAPSTNDENSVSPYSVVDVTDLIES GESSRHVIKKSIETEEAAHRESSVEGAGHSSRGIFGRLQAGLGRLARRVGEAVRNTVGSIFPQRAGAEQRTGKARTKYSP SASRGLRLMFTDFWRYRVLHRNPPMDGLFAKLDADEAEDMAAYTKEYVSNLEKRGAADRETIEHCQMVAKNWEKRARDLR DMGAAKKFLRDPFGKSDPKYKGTLPGEYTVGNTMFYDGPGVSKLSEVDTGFWLDMEKLSDAVLSANIQKGLRARFVLNQS IPQLESLEERFRKLESACDEARASLKEAGWIKEGKEPNKAQRAFRRFVEESRNLELSFGSFGESARRLSARVSQGLAAAG EAIRRCFDCRKGKYSLKKDLSSEELNLAEELIRFTDEMGIERDPDGNYNIPWVENWRTGVPVIEGEGAEHIYETMMPVQE SFEQVYEVMDMGLEERRDFAVSQQHYQVPPRSSLNYETPRFREYDVPRNSARSYYDVPRVPPQNEVEEMHVTKGMRSSVY ACFVAGMRNYIVSQPQEQIPNSEQVEQLFQELINDGDQIIQELMKIWNEELDNQ
Sequences:
>Translated_614_residues MFYFLGWFVMGIKGVGGSGHSDYPIPSHNGDGESEKNSSDSTSSKVNAKVTSSLQGAPSTNDENSVSPYSVVDVTDLIES GESSRHVIKKSIETEEAAHRESSVEGAGHSSRGIFGRLQAGLGRLARRVGEAVRNTVGSIFPQRAGAEQRTGKARTKYSP SASRGLRLMFTDFWRYRVLHRNPPMDGLFAKLDADEAEDMAAYTKEYVSNLEKRGAADRETIEHCQMVAKNWEKRARDLR DMGAAKKFLRDPFGKSDPKYKGTLPGEYTVGNTMFYDGPGVSKLSEVDTGFWLDMEKLSDAVLSANIQKGLRARFVLNQS IPQLESLEERFRKLESACDEARASLKEAGWIKEGKEPNKAQRAFRRFVEESRNLELSFGSFGESARRLSARVSQGLAAAG EAIRRCFDCRKGKYSLKKDLSSEELNLAEELIRFTDEMGIERDPDGNYNIPWVENWRTGVPVIEGEGAEHIYETMMPVQE SFEQVYEVMDMGLEERRDFAVSQQHYQVPPRSSLNYETPRFREYDVPRNSARSYYDVPRVPPQNEVEEMHVTKGMRSSVY ACFVAGMRNYIVSQPQEQIPNSEQVEQLFQELINDGDQIIQELMKIWNEELDNQ >Mature_614_residues MFYFLGWFVMGIKGVGGSGHSDYPIPSHNGDGESEKNSSDSTSSKVNAKVTSSLQGAPSTNDENSVSPYSVVDVTDLIES GESSRHVIKKSIETEEAAHRESSVEGAGHSSRGIFGRLQAGLGRLARRVGEAVRNTVGSIFPQRAGAEQRTGKARTKYSP SASRGLRLMFTDFWRYRVLHRNPPMDGLFAKLDADEAEDMAAYTKEYVSNLEKRGAADRETIEHCQMVAKNWEKRARDLR DMGAAKKFLRDPFGKSDPKYKGTLPGEYTVGNTMFYDGPGVSKLSEVDTGFWLDMEKLSDAVLSANIQKGLRARFVLNQS IPQLESLEERFRKLESACDEARASLKEAGWIKEGKEPNKAQRAFRRFVEESRNLELSFGSFGESARRLSARVSQGLAAAG EAIRRCFDCRKGKYSLKKDLSSEELNLAEELIRFTDEMGIERDPDGNYNIPWVENWRTGVPVIEGEGAEHIYETMMPVQE SFEQVYEVMDMGLEERRDFAVSQQHYQVPPRSSLNYETPRFREYDVPRNSARSYYDVPRVPPQNEVEEMHVTKGMRSSVY ACFVAGMRNYIVSQPQEQIPNSEQVEQLFQELINDGDQIIQELMKIWNEELDNQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To C.trachomatis CT875
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y268_CHLMU (Q9PL40)
Other databases:
- EMBL: AE002160 - PIR: G81721 - RefSeq: NP_296647.1 - GeneID: 1246438 - GenomeReviews: AE002160_GR - KEGG: cmu:TC0268 - TIGR: TC_0268 - HOGENOM: HBG413909 - OMA: PRASDYD - ProtClustDB: CLSK871127 - BioCyc: CMUR243161:TC_0268-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 69357; Mature: 69357
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFYFLGWFVMGIKGVGGSGHSDYPIPSHNGDGESEKNSSDSTSSKVNAKVTSSLQGAPST CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCC NDENSVSPYSVVDVTDLIESGESSRHVIKKSIETEEAAHRESSVEGAGHSSRGIFGRLQA CCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH GLGRLARRVGEAVRNTVGSIFPQRAGAEQRTGKARTKYSPSASRGLRLMFTDFWRYRVLH HHHHHHHHHHHHHHHHHHHHCCHHCCCHHHCCCCCCCCCCCHHCCEEHHHHHHHHHHHHH RNPPMDGLFAKLDADEAEDMAAYTKEYVSNLEKRGAADRETIEHCQMVAKNWEKRARDLR CCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH DMGAAKKFLRDPFGKSDPKYKGTLPGEYTVGNTMFYDGPGVSKLSEVDTGFWLDMEKLSD HHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCEEEECCCCCHHHHHCCCCCEEEHHHHHH AVLSANIQKGLRARFVLNQSIPQLESLEERFRKLESACDEARASLKEAGWIKEGKEPNKA HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH QRAFRRFVEESRNLELSFGSFGESARRLSARVSQGLAAAGEAIRRCFDCRKGKYSLKKDL HHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCC SSEELNLAEELIRFTDEMGIERDPDGNYNIPWVENWRTGVPVIEGEGAEHIYETMMPVQE CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHH SFEQVYEVMDMGLEERRDFAVSQQHYQVPPRSSLNYETPRFREYDVPRNSARSYYDVPRV HHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PPQNEVEEMHVTKGMRSSVYACFVAGMRNYIVSQPQEQIPNSEQVEQLFQELINDGDQII CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHCHHHHH QELMKIWNEELDNQ HHHHHHHHHHHCCC >Mature Secondary Structure MFYFLGWFVMGIKGVGGSGHSDYPIPSHNGDGESEKNSSDSTSSKVNAKVTSSLQGAPST CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCC NDENSVSPYSVVDVTDLIESGESSRHVIKKSIETEEAAHRESSVEGAGHSSRGIFGRLQA CCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH GLGRLARRVGEAVRNTVGSIFPQRAGAEQRTGKARTKYSPSASRGLRLMFTDFWRYRVLH HHHHHHHHHHHHHHHHHHHHCCHHCCCHHHCCCCCCCCCCCHHCCEEHHHHHHHHHHHHH RNPPMDGLFAKLDADEAEDMAAYTKEYVSNLEKRGAADRETIEHCQMVAKNWEKRARDLR CCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH DMGAAKKFLRDPFGKSDPKYKGTLPGEYTVGNTMFYDGPGVSKLSEVDTGFWLDMEKLSD HHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCEEEECCCCCHHHHHCCCCCEEEHHHHHH AVLSANIQKGLRARFVLNQSIPQLESLEERFRKLESACDEARASLKEAGWIKEGKEPNKA HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH QRAFRRFVEESRNLELSFGSFGESARRLSARVSQGLAAAGEAIRRCFDCRKGKYSLKKDL HHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCC SSEELNLAEELIRFTDEMGIERDPDGNYNIPWVENWRTGVPVIEGEGAEHIYETMMPVQE CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHH SFEQVYEVMDMGLEERRDFAVSQQHYQVPPRSSLNYETPRFREYDVPRNSARSYYDVPRV HHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PPQNEVEEMHVTKGMRSSVYACFVAGMRNYIVSQPQEQIPNSEQVEQLFQELINDGDQII CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHCHHHHH QELMKIWNEELDNQ HHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10684935