| Definition | Chlamydia muridarum Nigg, complete genome. |
|---|---|
| Accession | NC_002620 |
| Length | 1,072,950 |
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Identifier: 15834876
GI number: 15834876
Start: 298701
End: 299687
Strand: Direct
Name: Not Available
Synonym: TC0256
Alternate gene names: NA
Gene position: 298701-299687 (Clockwise)
Preceding gene: 15834874
Following gene: 15834877
Centisome position: 27.84
GC content: 40.22
Gene sequence:
>987_bases ATGATTAAGATAGCACAAAGTTTCAAACCTTACATAATGGAGCCTGGAGTCAAGATCCCTATTCCTGGTTCGACTTTGTA CGCACAGGTATTTCCTTCGCTTTGGAGAATATTCTCTGCCTCACATACGCTATTAGACGAGGGAAGAATTCCTGTAAAAG GTCCTTTGAAACGTTTTGTAGTATTTCAGAACTTGAGTCGAGGAGGAGTTGCTGTACTGTCTGAACAGTATAAGTATTAC CTTTCTCCTCAAGGATTTTATACCTCTTCTATAGCGGACCTTCCTCACTCTTCTTTTTATCCTGGGGAATATGTTTCTTT TGGAGTGCACAAGCACGCAGATTTGGAAAAAATTCGGAGGAGAAAAGATCTTAAAGAGATCCTTCCTTTCTTATTTCGGC ACGGAGTGCTTTTGCAAAAGCAAGCTTTGCAACCTTTAGAAAAAACAGAGGTGTCTCTTCTCTTAAAGAAGTTGGACGAG GTGATCGCTGAAGTTGATAAAGAAAATGTGTATGCTTTATTAGTAAATTTCATTTACTCCGGGTTATCTAAAACTTTGTT GCCGCGTCTGTATGATGAAGAATATCAGGGGATAGTATCAGAAGATCCTAGACAAGGGAATGAGGAAGTTCCTTTTGCAT TACTGAGAGCTGCTGCACTCAGTATGCAAAAGATCTTTATTCAAGAGCAGGAAGGAGTTGTGACCTTGTTACCCGTACTT CCCCCCGAATTCCCTTGCGGTCGTTGGGTTGGCCTTTCCCTTGATATTGGGGAAATTTCCTTCGAATGGACTAAAAAAAC GATTCGAAGGGTAGTTTTGAAAGCTCATTCTTCAAGAGAAATCGTGGTAACCAGTCCAGGAGTTCGATTGTGTCGTTTCC GTATTGAGGAACAGGGTAAGATTATCTCTTGTAAAATTAAAAAAAATTTAGAAAAGGTGGAGATAAAAGCGGGAACCACG TATCTATGGGACCGTTTTTGTAAATAA
Upstream 100 bases:
>100_bases TCTAAAAGGTACCATAGAAGGTCCCTCAATTGCTTTGAAGGAAGAGCCGTTAAAATAATAATGGGATTGGGGGAGACTAG TACAAAGGGCTGGGAGTTTT
Downstream 100 bases:
>100_bases ACGCAGAAAATGTCGTGGATCCTTTCTTCTTAAATACACAACATGTAGAGCTTCTTGTTTCAGGGAAACAGAGTAGCCCG CAAGATCTTTTAGGAATTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 328; Mature: 328
Protein sequence:
>328_residues MIKIAQSFKPYIMEPGVKIPIPGSTLYAQVFPSLWRIFSASHTLLDEGRIPVKGPLKRFVVFQNLSRGGVAVLSEQYKYY LSPQGFYTSSIADLPHSSFYPGEYVSFGVHKHADLEKIRRRKDLKEILPFLFRHGVLLQKQALQPLEKTEVSLLLKKLDE VIAEVDKENVYALLVNFIYSGLSKTLLPRLYDEEYQGIVSEDPRQGNEEVPFALLRAAALSMQKIFIQEQEGVVTLLPVL PPEFPCGRWVGLSLDIGEISFEWTKKTIRRVVLKAHSSREIVVTSPGVRLCRFRIEEQGKIISCKIKKNLEKVEIKAGTT YLWDRFCK
Sequences:
>Translated_328_residues MIKIAQSFKPYIMEPGVKIPIPGSTLYAQVFPSLWRIFSASHTLLDEGRIPVKGPLKRFVVFQNLSRGGVAVLSEQYKYY LSPQGFYTSSIADLPHSSFYPGEYVSFGVHKHADLEKIRRRKDLKEILPFLFRHGVLLQKQALQPLEKTEVSLLLKKLDE VIAEVDKENVYALLVNFIYSGLSKTLLPRLYDEEYQGIVSEDPRQGNEEVPFALLRAAALSMQKIFIQEQEGVVTLLPVL PPEFPCGRWVGLSLDIGEISFEWTKKTIRRVVLKAHSSREIVVTSPGVRLCRFRIEEQGKIISCKIKKNLEKVEIKAGTT YLWDRFCK >Mature_328_residues MIKIAQSFKPYIMEPGVKIPIPGSTLYAQVFPSLWRIFSASHTLLDEGRIPVKGPLKRFVVFQNLSRGGVAVLSEQYKYY LSPQGFYTSSIADLPHSSFYPGEYVSFGVHKHADLEKIRRRKDLKEILPFLFRHGVLLQKQALQPLEKTEVSLLLKKLDE VIAEVDKENVYALLVNFIYSGLSKTLLPRLYDEEYQGIVSEDPRQGNEEVPFALLRAAALSMQKIFIQEQEGVVTLLPVL PPEFPCGRWVGLSLDIGEISFEWTKKTIRRVVLKAHSSREIVVTSPGVRLCRFRIEEQGKIISCKIKKNLEKVEIKAGTT YLWDRFCK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37473; Mature: 37473
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKIAQSFKPYIMEPGVKIPIPGSTLYAQVFPSLWRIFSASHTLLDEGRIPVKGPLKRFV CCCCCCCCCCCEECCCCEECCCCCHHHHHHHHHHHHHHHHCHHHHHCCCCCCCHHHHHHH VFQNLSRGGVAVLSEQYKYYLSPQGFYTSSIADLPHSSFYPGEYVSFGVHKHADLEKIRR HHHCCCCCCHHHHHHCHHEEECCCCCCCHHHHHCCCCCCCCCCHHEECCCCCCCHHHHHH RKDLKEILPFLFRHGVLLQKQALQPLEKTEVSLLLKKLDEVIAEVDKENVYALLVNFIYS HHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH GLSKTLLPRLYDEEYQGIVSEDPRQGNEEVPFALLRAAALSMQKIFIQEQEGVVTLLPVL HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECC PPEFPCGRWVGLSLDIGEISFEWTKKTIRRVVLKAHSSREIVVTSPGVRLCRFRIEEQGK CCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCEEHHEEECCCCC IISCKIKKNLEKVEIKAGTTYLWDRFCK EEEEEECCCCEEEEEECCCHHHHHHHCC >Mature Secondary Structure MIKIAQSFKPYIMEPGVKIPIPGSTLYAQVFPSLWRIFSASHTLLDEGRIPVKGPLKRFV CCCCCCCCCCCEECCCCEECCCCCHHHHHHHHHHHHHHHHCHHHHHCCCCCCCHHHHHHH VFQNLSRGGVAVLSEQYKYYLSPQGFYTSSIADLPHSSFYPGEYVSFGVHKHADLEKIRR HHHCCCCCCHHHHHHCHHEEECCCCCCCHHHHHCCCCCCCCCCHHEECCCCCCCHHHHHH RKDLKEILPFLFRHGVLLQKQALQPLEKTEVSLLLKKLDEVIAEVDKENVYALLVNFIYS HHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH GLSKTLLPRLYDEEYQGIVSEDPRQGNEEVPFALLRAAALSMQKIFIQEQEGVVTLLPVL HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECC PPEFPCGRWVGLSLDIGEISFEWTKKTIRRVVLKAHSSREIVVTSPGVRLCRFRIEEQGK CCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCEEHHEEECCCCC IISCKIKKNLEKVEIKAGTTYLWDRFCK EEEEEECCCCEEEEEECCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA