Definition Chlamydia muridarum Nigg, complete genome.
Accession NC_002620
Length 1,072,950

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Identifier: 15834868

GI number: 15834868

Start: 288801

End: 290606

Strand: Direct

Name: Not Available

Synonym: TC0248

Alternate gene names: NA

Gene position: 288801-290606 (Clockwise)

Preceding gene: 15834867

Following gene: 15834869

Centisome position: 26.92

GC content: 40.75

Gene sequence:

>1806_bases
ATGAAAATGAATAGGATTTTGCTACTGCTGCTAACCTTTTCTTCCGCTATACATTCTCCTTTGCATGGGGAAAGTTTAGT
CTGTCAGAATGCTCTGAAAGATTTGAGTTTTTTGGAGCATTTGCTGCAAGTCAAGTATGCCCCTAAAACTTGGAAAGAAC
AGTATTTAGGTTGGGATCTTTCTAAAAGCTCTGTTTTTGCAGAGCAGAAATTGCGTTCCGAGGACAACCCTTCAACAAGC
TTTTGTCAGCAAGTAATTGCGGACTTTATTGGAGCGTTGAGTGATTTTCATGCCGGGGTCTCTTTCTTTGCTGTAGAGAG
TGCCTACCTTCCCTACTCTGTACAAAAAAGTAGCGATGGACGCTTCTATTTCGTTGATGTAATGACCTTTTCTTCTGATA
TTCGCGTCGGGGATGAGTTACTTGAGGTAGACGGGCAGCCTGTTGCAGAAGCACTTGCTACCCTATATGGAACCAATCAC
AAGGGGACTCTCGCTGAAGAATCTGCTGCTTTAAGAACGTTATTTTCTCGTATGGCTTCTTTAGGACATAAAGTCCCTTC
CGGGAGAATCACCCTCAAAGTTCGTCGTTCTTCTGGTTCTGTGAAAGATGTGCGAGCAAAATGGCGTTATACTCCAGAAA
GTGTAGGGGATTTAGCTACGATAGCTCCTTCCATAAAAGCTCCACAGCTGCAGAAGTCTATGAGAGGGGCCTTTCCTAAA
AAAGAAAGTGTATTTCATCAGTCGAGCACTCTGTTTTATTCTCCAATGGTTCCTCATTTTTGGTCGGAGTTTCGTAATCA
CTACGCAACGAGTGGTTTAAAAAGTGGGTACAATATTGGGGATACCGATGGATTTTTCCCAGTCATGGGACCCGTTATTT
GGGAGTCGGACGGAATTTTTCATGCTTATATTTTCCCCTTGGTTGATGAAAATGGTAGAAGCCATAACGTAGGATTTATC
AGAATTCCTACGTATGGTTGGCAAGAGATGGAAGATTTAGATTCTATAGGGACACCTCCTTGGGAAGAGTTTGGTAAGAT
CATTACGCTATTTTCTGAAAAAACAGAGGCTTTGATCATTGACCAAACGAATAATCCTGGGGGGAGCGTTATGTATTTAT
ACGGATTGCTCTCTATGTTGACGGATAAACCTTTAGATCTTCCTAAACATAGAATGATTCTAACTCAGGACGAAGTAGTT
GATGCTTTAGATTGGTTGAATTTATTGGAAAATGTGGATACAAACGCAGAGGCTCGGATTGCTTTGGGAGATAATATGGA
AGGATATCCCATTGACTTGCAGGCTGCTGAATATCTGAAAAGCTTTGCTCATCAGGTATTGGCATGTTGGAAGAATGGAG
ATATCGAATTATCTACACCGATTCCTCTTTTTGGGTTTGAGAAAATTCATCCACATCCTCGAGTCCAATATACTAAGCCT
ATTTGTGTTTTGATTAATGAACAGGATTTTTCTTGTGCGGATTTCTTCCCTGCTATTCTGAAAGACAATGACAGAGCCCT
TGTCGTTGGAACTCGAACAGCGGGAGCTGGGGGATTTGTCTTCAATGTACAATTCCCTAACAGAACGGGAATTAAAAGTT
GCTCTTTAACAGGATCTTTAGCAGTTAGAGAGCATGGGGATTTGATTGAAAATGTTGGGGTTGAACCTCATATTGAAATT
CCTTTCACAGCTAATGATATTCGTTATAGAGGGTATTCTGAATATATTCAGAAAGTACAAAAATTGGTTGCTCAGCTAAT
CAATAATGACAGTGTAATTATTCTCTCAGAGGATGGAAGTTTTTAA

Upstream 100 bases:

>100_bases
ATATAGTAAAAAATTTTTTAAAAATCTTTAAATAAAGGTGCGCTCCCAATATTATAGGCCCCTTTTTGAATGGAAAAATG
GGTTTTGGAGAACATCGATT

Downstream 100 bases:

>100_bases
CTGTTATGTTTATTTGTAAGTTAAGTAAGGGCTTTTCGACTTTGTGTCGAGAGGCCCTTATTTTGTTTAAAATGTTAACG
AAAGGAGGAGATAGTGCATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 601; Mature: 601

Protein sequence:

>601_residues
MKMNRILLLLLTFSSAIHSPLHGESLVCQNALKDLSFLEHLLQVKYAPKTWKEQYLGWDLSKSSVFAEQKLRSEDNPSTS
FCQQVIADFIGALSDFHAGVSFFAVESAYLPYSVQKSSDGRFYFVDVMTFSSDIRVGDELLEVDGQPVAEALATLYGTNH
KGTLAEESAALRTLFSRMASLGHKVPSGRITLKVRRSSGSVKDVRAKWRYTPESVGDLATIAPSIKAPQLQKSMRGAFPK
KESVFHQSSTLFYSPMVPHFWSEFRNHYATSGLKSGYNIGDTDGFFPVMGPVIWESDGIFHAYIFPLVDENGRSHNVGFI
RIPTYGWQEMEDLDSIGTPPWEEFGKIITLFSEKTEALIIDQTNNPGGSVMYLYGLLSMLTDKPLDLPKHRMILTQDEVV
DALDWLNLLENVDTNAEARIALGDNMEGYPIDLQAAEYLKSFAHQVLACWKNGDIELSTPIPLFGFEKIHPHPRVQYTKP
ICVLINEQDFSCADFFPAILKDNDRALVVGTRTAGAGGFVFNVQFPNRTGIKSCSLTGSLAVREHGDLIENVGVEPHIEI
PFTANDIRYRGYSEYIQKVQKLVAQLINNDSVIILSEDGSF

Sequences:

>Translated_601_residues
MKMNRILLLLLTFSSAIHSPLHGESLVCQNALKDLSFLEHLLQVKYAPKTWKEQYLGWDLSKSSVFAEQKLRSEDNPSTS
FCQQVIADFIGALSDFHAGVSFFAVESAYLPYSVQKSSDGRFYFVDVMTFSSDIRVGDELLEVDGQPVAEALATLYGTNH
KGTLAEESAALRTLFSRMASLGHKVPSGRITLKVRRSSGSVKDVRAKWRYTPESVGDLATIAPSIKAPQLQKSMRGAFPK
KESVFHQSSTLFYSPMVPHFWSEFRNHYATSGLKSGYNIGDTDGFFPVMGPVIWESDGIFHAYIFPLVDENGRSHNVGFI
RIPTYGWQEMEDLDSIGTPPWEEFGKIITLFSEKTEALIIDQTNNPGGSVMYLYGLLSMLTDKPLDLPKHRMILTQDEVV
DALDWLNLLENVDTNAEARIALGDNMEGYPIDLQAAEYLKSFAHQVLACWKNGDIELSTPIPLFGFEKIHPHPRVQYTKP
ICVLINEQDFSCADFFPAILKDNDRALVVGTRTAGAGGFVFNVQFPNRTGIKSCSLTGSLAVREHGDLIENVGVEPHIEI
PFTANDIRYRGYSEYIQKVQKLVAQLINNDSVIILSEDGSF
>Mature_601_residues
MKMNRILLLLLTFSSAIHSPLHGESLVCQNALKDLSFLEHLLQVKYAPKTWKEQYLGWDLSKSSVFAEQKLRSEDNPSTS
FCQQVIADFIGALSDFHAGVSFFAVESAYLPYSVQKSSDGRFYFVDVMTFSSDIRVGDELLEVDGQPVAEALATLYGTNH
KGTLAEESAALRTLFSRMASLGHKVPSGRITLKVRRSSGSVKDVRAKWRYTPESVGDLATIAPSIKAPQLQKSMRGAFPK
KESVFHQSSTLFYSPMVPHFWSEFRNHYATSGLKSGYNIGDTDGFFPVMGPVIWESDGIFHAYIFPLVDENGRSHNVGFI
RIPTYGWQEMEDLDSIGTPPWEEFGKIITLFSEKTEALIIDQTNNPGGSVMYLYGLLSMLTDKPLDLPKHRMILTQDEVV
DALDWLNLLENVDTNAEARIALGDNMEGYPIDLQAAEYLKSFAHQVLACWKNGDIELSTPIPLFGFEKIHPHPRVQYTKP
ICVLINEQDFSCADFFPAILKDNDRALVVGTRTAGAGGFVFNVQFPNRTGIKSCSLTGSLAVREHGDLIENVGVEPHIEI
PFTANDIRYRGYSEYIQKVQKLVAQLINNDSVIILSEDGSF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the chlamydial CPn_1016/CT_858/TC_0248 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y248_CHLMU (Q9PL60)

Other databases:

- EMBL:   AE002160
- PIR:   B81723
- RefSeq:   NP_296627.1
- ProteinModelPortal:   Q9PL60
- GeneID:   1246417
- GenomeReviews:   AE002160_GR
- KEGG:   cmu:TC0248
- TIGR:   TC_0248
- HOGENOM:   HBG413896
- OMA:   LEGVETD
- ProtClustDB:   CLSK871638
- BioCyc:   CMUR243161:TC_0248-MONOMER
- GO:   GO:0006508
- InterPro:   IPR005151
- SMART:   SM00245

Pfam domain/function: PF03572 Peptidase_S41

EC number: NA

Molecular weight: Translated: 67114; Mature: 67114

Theoretical pI: Translated: 5.47; Mature: 5.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMNRILLLLLTFSSAIHSPLHGESLVCQNALKDLSFLEHLLQVKYAPKTWKEQYLGWDL
CCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCC
SKSSVFAEQKLRSEDNPSTSFCQQVIADFIGALSDFHAGVSFFAVESAYLPYSVQKSSDG
CHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCEEEEECCCC
RFYFVDVMTFSSDIRVGDELLEVDGQPVAEALATLYGTNHKGTLAEESAALRTLFSRMAS
CEEEEEEEEECCCCCCCHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
LGHKVPSGRITLKVRRSSGSVKDVRAKWRYTPESVGDLATIAPSIKAPQLQKSMRGAFPK
HCCCCCCCEEEEEEECCCCCHHHHHHHCCCCHHHHCCHHHHCCCCCCHHHHHHHHCCCCC
KESVFHQSSTLFYSPMVPHFWSEFRNHYATSGLKSGYNIGDTDGFFPVMGPVIWESDGIF
HHHHHHCCCCEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCEEECCCCEE
HAYIFPLVDENGRSHNVGFIRIPTYGWQEMEDLDSIGTPPWEEFGKIITLFSEKTEALII
EEEEEEEECCCCCCCCEEEEEECCCCCHHHHHHHHCCCCCHHHHHHEEEEECCCCCEEEE
DQTNNPGGSVMYLYGLLSMLTDKPLDLPKHRMILTQDEVVDALDWLNLLENVDTNAEARI
ECCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCEEE
ALGDNMEGYPIDLQAAEYLKSFAHQVLACWKNGDIELSTPIPLFGFEKIHPHPRVQYTKP
EECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCHHCCCCCCEEECCC
ICVLINEQDFSCADFFPAILKDNDRALVVGTRTAGAGGFVFNVQFPNRTGIKSCSLTGSL
EEEEECCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCE
AVREHGDLIENVGVEPHIEIPFTANDIRYRGYSEYIQKVQKLVAQLINNDSVIILSEDGS
EEHHCCCHHHHCCCCCEEEECEECCCCEECCHHHHHHHHHHHHHHHHCCCCEEEEECCCC
F
C
>Mature Secondary Structure
MKMNRILLLLLTFSSAIHSPLHGESLVCQNALKDLSFLEHLLQVKYAPKTWKEQYLGWDL
CCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCC
SKSSVFAEQKLRSEDNPSTSFCQQVIADFIGALSDFHAGVSFFAVESAYLPYSVQKSSDG
CHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCEEEEECCCC
RFYFVDVMTFSSDIRVGDELLEVDGQPVAEALATLYGTNHKGTLAEESAALRTLFSRMAS
CEEEEEEEEECCCCCCCHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
LGHKVPSGRITLKVRRSSGSVKDVRAKWRYTPESVGDLATIAPSIKAPQLQKSMRGAFPK
HCCCCCCCEEEEEEECCCCCHHHHHHHCCCCHHHHCCHHHHCCCCCCHHHHHHHHCCCCC
KESVFHQSSTLFYSPMVPHFWSEFRNHYATSGLKSGYNIGDTDGFFPVMGPVIWESDGIF
HHHHHHCCCCEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCEEECCCCEE
HAYIFPLVDENGRSHNVGFIRIPTYGWQEMEDLDSIGTPPWEEFGKIITLFSEKTEALII
EEEEEEEECCCCCCCCEEEEEECCCCCHHHHHHHHCCCCCHHHHHHEEEEECCCCCEEEE
DQTNNPGGSVMYLYGLLSMLTDKPLDLPKHRMILTQDEVVDALDWLNLLENVDTNAEARI
ECCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCEEE
ALGDNMEGYPIDLQAAEYLKSFAHQVLACWKNGDIELSTPIPLFGFEKIHPHPRVQYTKP
EECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCHHCCCCCCEEECCC
ICVLINEQDFSCADFFPAILKDNDRALVVGTRTAGAGGFVFNVQFPNRTGIKSCSLTGSL
EEEEECCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCE
AVREHGDLIENVGVEPHIEIPFTANDIRYRGYSEYIQKVQKLVAQLINNDSVIILSEDGS
EEHHCCCHHHHCCCCCEEEECEECCCCEECCHHHHHHHHHHHHHHHHCCCCEEEEECCCC
F
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10684935