| Definition | Chlamydia muridarum Nigg, complete genome. |
|---|---|
| Accession | NC_002620 |
| Length | 1,072,950 |
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Identifier: 15834868
GI number: 15834868
Start: 288801
End: 290606
Strand: Direct
Name: Not Available
Synonym: TC0248
Alternate gene names: NA
Gene position: 288801-290606 (Clockwise)
Preceding gene: 15834867
Following gene: 15834869
Centisome position: 26.92
GC content: 40.75
Gene sequence:
>1806_bases ATGAAAATGAATAGGATTTTGCTACTGCTGCTAACCTTTTCTTCCGCTATACATTCTCCTTTGCATGGGGAAAGTTTAGT CTGTCAGAATGCTCTGAAAGATTTGAGTTTTTTGGAGCATTTGCTGCAAGTCAAGTATGCCCCTAAAACTTGGAAAGAAC AGTATTTAGGTTGGGATCTTTCTAAAAGCTCTGTTTTTGCAGAGCAGAAATTGCGTTCCGAGGACAACCCTTCAACAAGC TTTTGTCAGCAAGTAATTGCGGACTTTATTGGAGCGTTGAGTGATTTTCATGCCGGGGTCTCTTTCTTTGCTGTAGAGAG TGCCTACCTTCCCTACTCTGTACAAAAAAGTAGCGATGGACGCTTCTATTTCGTTGATGTAATGACCTTTTCTTCTGATA TTCGCGTCGGGGATGAGTTACTTGAGGTAGACGGGCAGCCTGTTGCAGAAGCACTTGCTACCCTATATGGAACCAATCAC AAGGGGACTCTCGCTGAAGAATCTGCTGCTTTAAGAACGTTATTTTCTCGTATGGCTTCTTTAGGACATAAAGTCCCTTC CGGGAGAATCACCCTCAAAGTTCGTCGTTCTTCTGGTTCTGTGAAAGATGTGCGAGCAAAATGGCGTTATACTCCAGAAA GTGTAGGGGATTTAGCTACGATAGCTCCTTCCATAAAAGCTCCACAGCTGCAGAAGTCTATGAGAGGGGCCTTTCCTAAA AAAGAAAGTGTATTTCATCAGTCGAGCACTCTGTTTTATTCTCCAATGGTTCCTCATTTTTGGTCGGAGTTTCGTAATCA CTACGCAACGAGTGGTTTAAAAAGTGGGTACAATATTGGGGATACCGATGGATTTTTCCCAGTCATGGGACCCGTTATTT GGGAGTCGGACGGAATTTTTCATGCTTATATTTTCCCCTTGGTTGATGAAAATGGTAGAAGCCATAACGTAGGATTTATC AGAATTCCTACGTATGGTTGGCAAGAGATGGAAGATTTAGATTCTATAGGGACACCTCCTTGGGAAGAGTTTGGTAAGAT CATTACGCTATTTTCTGAAAAAACAGAGGCTTTGATCATTGACCAAACGAATAATCCTGGGGGGAGCGTTATGTATTTAT ACGGATTGCTCTCTATGTTGACGGATAAACCTTTAGATCTTCCTAAACATAGAATGATTCTAACTCAGGACGAAGTAGTT GATGCTTTAGATTGGTTGAATTTATTGGAAAATGTGGATACAAACGCAGAGGCTCGGATTGCTTTGGGAGATAATATGGA AGGATATCCCATTGACTTGCAGGCTGCTGAATATCTGAAAAGCTTTGCTCATCAGGTATTGGCATGTTGGAAGAATGGAG ATATCGAATTATCTACACCGATTCCTCTTTTTGGGTTTGAGAAAATTCATCCACATCCTCGAGTCCAATATACTAAGCCT ATTTGTGTTTTGATTAATGAACAGGATTTTTCTTGTGCGGATTTCTTCCCTGCTATTCTGAAAGACAATGACAGAGCCCT TGTCGTTGGAACTCGAACAGCGGGAGCTGGGGGATTTGTCTTCAATGTACAATTCCCTAACAGAACGGGAATTAAAAGTT GCTCTTTAACAGGATCTTTAGCAGTTAGAGAGCATGGGGATTTGATTGAAAATGTTGGGGTTGAACCTCATATTGAAATT CCTTTCACAGCTAATGATATTCGTTATAGAGGGTATTCTGAATATATTCAGAAAGTACAAAAATTGGTTGCTCAGCTAAT CAATAATGACAGTGTAATTATTCTCTCAGAGGATGGAAGTTTTTAA
Upstream 100 bases:
>100_bases ATATAGTAAAAAATTTTTTAAAAATCTTTAAATAAAGGTGCGCTCCCAATATTATAGGCCCCTTTTTGAATGGAAAAATG GGTTTTGGAGAACATCGATT
Downstream 100 bases:
>100_bases CTGTTATGTTTATTTGTAAGTTAAGTAAGGGCTTTTCGACTTTGTGTCGAGAGGCCCTTATTTTGTTTAAAATGTTAACG AAAGGAGGAGATAGTGCATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 601; Mature: 601
Protein sequence:
>601_residues MKMNRILLLLLTFSSAIHSPLHGESLVCQNALKDLSFLEHLLQVKYAPKTWKEQYLGWDLSKSSVFAEQKLRSEDNPSTS FCQQVIADFIGALSDFHAGVSFFAVESAYLPYSVQKSSDGRFYFVDVMTFSSDIRVGDELLEVDGQPVAEALATLYGTNH KGTLAEESAALRTLFSRMASLGHKVPSGRITLKVRRSSGSVKDVRAKWRYTPESVGDLATIAPSIKAPQLQKSMRGAFPK KESVFHQSSTLFYSPMVPHFWSEFRNHYATSGLKSGYNIGDTDGFFPVMGPVIWESDGIFHAYIFPLVDENGRSHNVGFI RIPTYGWQEMEDLDSIGTPPWEEFGKIITLFSEKTEALIIDQTNNPGGSVMYLYGLLSMLTDKPLDLPKHRMILTQDEVV DALDWLNLLENVDTNAEARIALGDNMEGYPIDLQAAEYLKSFAHQVLACWKNGDIELSTPIPLFGFEKIHPHPRVQYTKP ICVLINEQDFSCADFFPAILKDNDRALVVGTRTAGAGGFVFNVQFPNRTGIKSCSLTGSLAVREHGDLIENVGVEPHIEI PFTANDIRYRGYSEYIQKVQKLVAQLINNDSVIILSEDGSF
Sequences:
>Translated_601_residues MKMNRILLLLLTFSSAIHSPLHGESLVCQNALKDLSFLEHLLQVKYAPKTWKEQYLGWDLSKSSVFAEQKLRSEDNPSTS FCQQVIADFIGALSDFHAGVSFFAVESAYLPYSVQKSSDGRFYFVDVMTFSSDIRVGDELLEVDGQPVAEALATLYGTNH KGTLAEESAALRTLFSRMASLGHKVPSGRITLKVRRSSGSVKDVRAKWRYTPESVGDLATIAPSIKAPQLQKSMRGAFPK KESVFHQSSTLFYSPMVPHFWSEFRNHYATSGLKSGYNIGDTDGFFPVMGPVIWESDGIFHAYIFPLVDENGRSHNVGFI RIPTYGWQEMEDLDSIGTPPWEEFGKIITLFSEKTEALIIDQTNNPGGSVMYLYGLLSMLTDKPLDLPKHRMILTQDEVV DALDWLNLLENVDTNAEARIALGDNMEGYPIDLQAAEYLKSFAHQVLACWKNGDIELSTPIPLFGFEKIHPHPRVQYTKP ICVLINEQDFSCADFFPAILKDNDRALVVGTRTAGAGGFVFNVQFPNRTGIKSCSLTGSLAVREHGDLIENVGVEPHIEI PFTANDIRYRGYSEYIQKVQKLVAQLINNDSVIILSEDGSF >Mature_601_residues MKMNRILLLLLTFSSAIHSPLHGESLVCQNALKDLSFLEHLLQVKYAPKTWKEQYLGWDLSKSSVFAEQKLRSEDNPSTS FCQQVIADFIGALSDFHAGVSFFAVESAYLPYSVQKSSDGRFYFVDVMTFSSDIRVGDELLEVDGQPVAEALATLYGTNH KGTLAEESAALRTLFSRMASLGHKVPSGRITLKVRRSSGSVKDVRAKWRYTPESVGDLATIAPSIKAPQLQKSMRGAFPK KESVFHQSSTLFYSPMVPHFWSEFRNHYATSGLKSGYNIGDTDGFFPVMGPVIWESDGIFHAYIFPLVDENGRSHNVGFI RIPTYGWQEMEDLDSIGTPPWEEFGKIITLFSEKTEALIIDQTNNPGGSVMYLYGLLSMLTDKPLDLPKHRMILTQDEVV DALDWLNLLENVDTNAEARIALGDNMEGYPIDLQAAEYLKSFAHQVLACWKNGDIELSTPIPLFGFEKIHPHPRVQYTKP ICVLINEQDFSCADFFPAILKDNDRALVVGTRTAGAGGFVFNVQFPNRTGIKSCSLTGSLAVREHGDLIENVGVEPHIEI PFTANDIRYRGYSEYIQKVQKLVAQLINNDSVIILSEDGSF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chlamydial CPn_1016/CT_858/TC_0248 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y248_CHLMU (Q9PL60)
Other databases:
- EMBL: AE002160 - PIR: B81723 - RefSeq: NP_296627.1 - ProteinModelPortal: Q9PL60 - GeneID: 1246417 - GenomeReviews: AE002160_GR - KEGG: cmu:TC0248 - TIGR: TC_0248 - HOGENOM: HBG413896 - OMA: LEGVETD - ProtClustDB: CLSK871638 - BioCyc: CMUR243161:TC_0248-MONOMER - GO: GO:0006508 - InterPro: IPR005151 - SMART: SM00245
Pfam domain/function: PF03572 Peptidase_S41
EC number: NA
Molecular weight: Translated: 67114; Mature: 67114
Theoretical pI: Translated: 5.47; Mature: 5.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKMNRILLLLLTFSSAIHSPLHGESLVCQNALKDLSFLEHLLQVKYAPKTWKEQYLGWDL CCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCC SKSSVFAEQKLRSEDNPSTSFCQQVIADFIGALSDFHAGVSFFAVESAYLPYSVQKSSDG CHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCEEEEECCCC RFYFVDVMTFSSDIRVGDELLEVDGQPVAEALATLYGTNHKGTLAEESAALRTLFSRMAS CEEEEEEEEECCCCCCCHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH LGHKVPSGRITLKVRRSSGSVKDVRAKWRYTPESVGDLATIAPSIKAPQLQKSMRGAFPK HCCCCCCCEEEEEEECCCCCHHHHHHHCCCCHHHHCCHHHHCCCCCCHHHHHHHHCCCCC KESVFHQSSTLFYSPMVPHFWSEFRNHYATSGLKSGYNIGDTDGFFPVMGPVIWESDGIF HHHHHHCCCCEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCEEECCCCEE HAYIFPLVDENGRSHNVGFIRIPTYGWQEMEDLDSIGTPPWEEFGKIITLFSEKTEALII EEEEEEEECCCCCCCCEEEEEECCCCCHHHHHHHHCCCCCHHHHHHEEEEECCCCCEEEE DQTNNPGGSVMYLYGLLSMLTDKPLDLPKHRMILTQDEVVDALDWLNLLENVDTNAEARI ECCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCEEE ALGDNMEGYPIDLQAAEYLKSFAHQVLACWKNGDIELSTPIPLFGFEKIHPHPRVQYTKP EECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCHHCCCCCCEEECCC ICVLINEQDFSCADFFPAILKDNDRALVVGTRTAGAGGFVFNVQFPNRTGIKSCSLTGSL EEEEECCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCE AVREHGDLIENVGVEPHIEIPFTANDIRYRGYSEYIQKVQKLVAQLINNDSVIILSEDGS EEHHCCCHHHHCCCCCEEEECEECCCCEECCHHHHHHHHHHHHHHHHCCCCEEEEECCCC F C >Mature Secondary Structure MKMNRILLLLLTFSSAIHSPLHGESLVCQNALKDLSFLEHLLQVKYAPKTWKEQYLGWDL CCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCC SKSSVFAEQKLRSEDNPSTSFCQQVIADFIGALSDFHAGVSFFAVESAYLPYSVQKSSDG CHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCEEEEECCCC RFYFVDVMTFSSDIRVGDELLEVDGQPVAEALATLYGTNHKGTLAEESAALRTLFSRMAS CEEEEEEEEECCCCCCCHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH LGHKVPSGRITLKVRRSSGSVKDVRAKWRYTPESVGDLATIAPSIKAPQLQKSMRGAFPK HCCCCCCCEEEEEEECCCCCHHHHHHHCCCCHHHHCCHHHHCCCCCCHHHHHHHHCCCCC KESVFHQSSTLFYSPMVPHFWSEFRNHYATSGLKSGYNIGDTDGFFPVMGPVIWESDGIF HHHHHHCCCCEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCEEECCCCEE HAYIFPLVDENGRSHNVGFIRIPTYGWQEMEDLDSIGTPPWEEFGKIITLFSEKTEALII EEEEEEEECCCCCCCCEEEEEECCCCCHHHHHHHHCCCCCHHHHHHEEEEECCCCCEEEE DQTNNPGGSVMYLYGLLSMLTDKPLDLPKHRMILTQDEVVDALDWLNLLENVDTNAEARI ECCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCEEE ALGDNMEGYPIDLQAAEYLKSFAHQVLACWKNGDIELSTPIPLFGFEKIHPHPRVQYTKP EECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCHHCCCCCCEEECCC ICVLINEQDFSCADFFPAILKDNDRALVVGTRTAGAGGFVFNVQFPNRTGIKSCSLTGSL EEEEECCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCE AVREHGDLIENVGVEPHIEIPFTANDIRYRGYSEYIQKVQKLVAQLINNDSVIILSEDGS EEHHCCCHHHHCCCCCEEEECEECCCCEECCHHHHHHHHHHHHHHHHCCCCEEEEECCCC F C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10684935