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Identifier: 15834760

GI number: 15834760

Start: 171639

End: 172370

Strand: Direct

Name: Not Available

Synonym: TC0140

Alternate gene names: 15834760

Gene position: 171639-172370 (Clockwise)

Preceding gene: 15834759

Following gene: 15834761

Centisome position: 16.0

GC content: 40.3

Gene sequence:

>732_bases
ATGAATCGTAGAAACACGATGATTGTAGCAGCTTCTGTGAATGCAGTACTCTTGGCAGTGCTGTTTATGACAGCACGCTA
TTCAGAGCAAGAGGTAGAGTATTCGCAGAAAATAGCACCTATTAAAATTTTAGAGCCGGTACCAGTTGTTGAGAAGGCTC
CTGAAAAATTAGAAAAAAATCCAGAAGTGATCGCTAAGCCCGCACAGGTTGTGAGAAATCCTGTAGTCTCTAAAGCGGAG
CTTGCTGCGCAATTCACAGATAAAAATCAAACTGTTGAGAAAGAGATCAAAGTCTCTCCTAAAGCGACGCCTCCTCCTGT
GGTTGTTGAATCTCCTACATCCGAAATTCCTGTTGTGCAGGAAAAAAGTGCAGACAAACCTGCAGAGCAAGAAGAATTTT
CTACAGTTATTGTTAAGAAGGGAGATTTTTTAGAGCGAATTGCTAGATCCCATCACACTACAGTTTCTGCATTGATGCAA
CTTAATGATTTGTCGTCGACGCAATTACAAATAGGACAAGTTTTACGCGTTCCTAAAACGAATAAGACAGAGAAAGATCT
TCAAGTTAAGACCCCCAATCCAGAAGATTATTATGTGATTAAAGAAGGGGATAGTCCTTGGGCTATAGCTTTGAGTAATG
GGATTCGATTAGATGAATTGTTGAAATTGAATGGATTAGATGAGCAGAAAGCTCGTAAGTTGCGTCCTGGAGATAGATTA
CGAATTCGATAG

Upstream 100 bases:

>100_bases
TTTTATTGTCTCCAGCTTGCGCTAGCTTTGATCAATTTCGTAGCTATGAAGAGCGGGGAGCGATATTTAAGCAGTTGGTT
GGGATGGAAGAGGTTCTTTT

Downstream 100 bases:

>100_bases
ATCTCAGGCAATTGTTATGAAATGGTTCCTGATTTCCTGTTTATTAGGAATTTTTTCTCTTGGGCTGATCATGGTATTCG
ATACCTCGTCGGCAGAAGTG

Product: hypothetical protein

Products: NA

Alternate protein names: Cell wall lytic enzyme associated with cell separation [H]

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MNRRNTMIVAASVNAVLLAVLFMTARYSEQEVEYSQKIAPIKILEPVPVVEKAPEKLEKNPEVIAKPAQVVRNPVVSKAE
LAAQFTDKNQTVEKEIKVSPKATPPPVVVESPTSEIPVVQEKSADKPAEQEEFSTVIVKKGDFLERIARSHHTTVSALMQ
LNDLSSTQLQIGQVLRVPKTNKTEKDLQVKTPNPEDYYVIKEGDSPWAIALSNGIRLDELLKLNGLDEQKARKLRPGDRL
RIR

Sequences:

>Translated_243_residues
MNRRNTMIVAASVNAVLLAVLFMTARYSEQEVEYSQKIAPIKILEPVPVVEKAPEKLEKNPEVIAKPAQVVRNPVVSKAE
LAAQFTDKNQTVEKEIKVSPKATPPPVVVESPTSEIPVVQEKSADKPAEQEEFSTVIVKKGDFLERIARSHHTTVSALMQ
LNDLSSTQLQIGQVLRVPKTNKTEKDLQVKTPNPEDYYVIKEGDSPWAIALSNGIRLDELLKLNGLDEQKARKLRPGDRL
RIR
>Mature_243_residues
MNRRNTMIVAASVNAVLLAVLFMTARYSEQEVEYSQKIAPIKILEPVPVVEKAPEKLEKNPEVIAKPAQVVRNPVVSKAE
LAAQFTDKNQTVEKEIKVSPKATPPPVVVESPTSEIPVVQEKSADKPAEQEEFSTVIVKKGDFLERIARSHHTTVSALMQ
LNDLSSTQLQIGQVLRVPKTNKTEKDLQVKTPNPEDYYVIKEGDSPWAIALSNGIRLDELLKLNGLDEQKARKLRPGDRL
RIR

Specific function: Probably functions as a cell separation enzyme in addition to lytE and lytF [H]

COG id: COG1388

COG function: function code M; FOG: LysM repeat

Gene ontology:

Cell location: Cell surface. Note=Localized at cell separation sites and cell poles during late vegetative phase [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 4 LysM repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000064
- InterPro:   IPR018392
- InterPro:   IPR002482 [H]

Pfam domain/function: PF01476 LysM; PF00877 NLPC_P60 [H]

EC number: =3.4.19.11 [H]

Molecular weight: Translated: 27132; Mature: 27132

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRRNTMIVAASVNAVLLAVLFMTARYSEQEVEYSQKIAPIKILEPVPVVEKAPEKLEKN
CCCCCEEEEEEHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEECCCCHHHHCHHHHHCC
PEVIAKPAQVVRNPVVSKAELAAQFTDKNQTVEKEIKVSPKATPPPVVVESPTSEIPVVQ
CHHHHCCHHHHHCCCCHHHHHHHHHCCCCCCHHHHEEECCCCCCCCEEEECCCCCCCCCC
EKSADKPAEQEEFSTVIVKKGDFLERIARSHHTTVSALMQLNDLSSTQLQIGQVLRVPKT
CCCCCCCCCHHHHEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCC
NKTEKDLQVKTPNPEDYYVIKEGDSPWAIALSNGIRLDELLKLNGLDEQKARKLRPGDRL
CCCCCCEEEECCCCCCEEEEECCCCCEEEEECCCCCHHHHHHHCCCCHHHHHHCCCCCCE
RIR
ECC
>Mature Secondary Structure
MNRRNTMIVAASVNAVLLAVLFMTARYSEQEVEYSQKIAPIKILEPVPVVEKAPEKLEKN
CCCCCEEEEEEHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEECCCCHHHHCHHHHHCC
PEVIAKPAQVVRNPVVSKAELAAQFTDKNQTVEKEIKVSPKATPPPVVVESPTSEIPVVQ
CHHHHCCHHHHHCCCCHHHHHHHHHCCCCCCHHHHEEECCCCCCCCEEEECCCCCCCCCC
EKSADKPAEQEEFSTVIVKKGDFLERIARSHHTTVSALMQLNDLSSTQLQIGQVLRVPKT
CCCCCCCCCHHHHEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCC
NKTEKDLQVKTPNPEDYYVIKEGDSPWAIALSNGIRLDELLKLNGLDEQKARKLRPGDRL
CCCCCCEEEECCCCCCEEEEECCCCCEEEEECCCCCHHHHHHHCCCCHHHHHHCCCCCCE
RIR
ECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9734814; 9384377 [H]