| Definition | Chlamydia muridarum Nigg, complete genome. |
|---|---|
| Accession | NC_002620 |
| Length | 1,072,950 |
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The map label for this gene is tkt
Identifier: 15834751
GI number: 15834751
Start: 161045
End: 163045
Strand: Direct
Name: tkt
Synonym: TC0131
Alternate gene names: 15834751
Gene position: 161045-163045 (Clockwise)
Preceding gene: 15834744
Following gene: 15834753
Centisome position: 15.01
GC content: 41.83
Gene sequence:
>2001_bases ATGGCTGGCAATAGTGAATTGGATATAGATATCTTGGAAAAGATTGCAGGGACTATTAAACAGTTGAGTATAGAGAGTAT TCAAAAGGCTTCTTCAGGCCACCCAGGAATGCCATTAGGATGCGCTGAGATCGCAGCATATTTGTATGGTTGCGTATTGC GATATAATTCTAAGGATTCTCAATGGATGAATAGAGATCGATTTGTTCTATCTGCAGGGCATGGTTCTGCTCTTCTTTAT TCTTGTCTACATTTAGCAGGCTTTAATGTGAGGTTAGAGGATCTTCAGCAGTTTCGACAACTTCACTCCCAAACTCCTGG GCATCCAGAATTTCGGGAAACGGATGGTGTTGAAGCGACAACTGGACCTTTAGGGCAAGGAATAGGGAATGCTGTAGGAA TGGCTCTTTCATTGAAGATGTTGGGATCTAGATTCAATCAGTCTTCCACGTCCATTTTTGATGCTAAGGTCTATTGCTTG GCAGGAGATGGATGCTTCATGGAAGGAGTAAGTCATGAAGCTTGTAGCTTTGCAGGTTCCTTGGGATTGGATAATCTTAT TTTAATCTATGATTATAATGAGATTATTTTAGATGGGACTCTTCAAGATGTTAGTGTTGAGGATACGAAACAACGATTCT TAGCCTATGGCTGGGATGTTTTTGAAGCCAATGGTCATGATTTTGAGGATTTACATCGGGTATTTTCTCAAATCAAAAAA GGGCAACAAAAACCTACTTTGATTATTGCACATACTATTATTGGTCATGGATCTCCTAAAGAAGGAACGAACAAAGCTCA TGGATCCCCTTTGGGAGAAGATGGAGTCGCGCAAACTAAAAGTTTTTGGCACCTGCCAGAAGAAAAGTTTTTTGTCCCTT CATCTGTGAAGATGTTCTTTGCAGCAAAACAACAAGAAGGACAAAAATTACAGGAAGAATGGCAGGAGCGCTTCCGGGTG TGGTCAAAACGATTCCCAGAACAACACCAGGAATATCTTAAGTTAACTCAAGAAATTTCCATTCAAGATCTTGAAGTATT ATTGAATCTTATTGATATGCCAGAGTCTATAGCTGGACGGGCTGCTTCAAACAAAGTAATCCAGGTTTTGGCAGAGAATA TTCCATCTCTAATAGGGGGATCGGCGGATCTTTCCAGCTCAGATGGTACCTGGATAGCTAAGGAGACTGCTGTCAACGCT TCTCATTTTCAAGGTCGGAATATTCGCTATGGTGTACGAGAATTCGGCATGGGCACGATTATGAACGGACTCGCGTACAG CCAGGTATTTCGTCCTTTTGGTGGAACATTTTTAGTATTTTCAGATTATTTACGTGCAGCGATTCGACTAGCAGCATTGT CTAAGCTTCCGGTTATTTATCAATTTACACATGATTCTATTTTTGTTGGGGAAGATGGCCCTACTCATCAACCTATAGAG CAAATTATGTCATTACGTGCAATACCAGGATTAAGGGTAGTGCGTCCTGCGGATGCGCATGAAGTAAAAGGAGCCTGGTT ATCTGCATTAGAAAACTCAGGGCCTACAGCTTTGATTCTATCTAGACAAAATCTCCCAACTCTTAAAGAGACTAAACGGT CGTTTAGAGATGGAGTAGGAAGAGGAGCTTATATTTTAGTTAAAGAAGAAGGGGGAAGCCCGGACTATACATTATGCGCT TCTGGGTCAGAGGTACATTTGGCAATGGAAGTTGCGCAAAGCCTCATGGCTTTGGATAAGCGAGTTCGCGTAATTTCATT CCCTTGTTGGGAGTTATTTGAGCGACAAGACCCCGAGTATCGTGAATCTGTGATTGGTGGGGACTTAGGATTGCGTGTCT CTATAGAGGCCGGATCTGCTTTGGGGTGGTACAAATATATAGGCAGTAATGGCTTGTCTATTGCTATGGATGTGTTTGGT ATGTCTGGAGCTCCCCACGAAGTTGCTGAAACTTGTGGTTTTACTGTGGATAGTATTGTTCAGAGAATTCTTTCTGTTTA A
Upstream 100 bases:
>100_bases ACTTTTGTATAATTATTTTGTTCCCCTTATTATCGCGCTTTCGATTTTACGTCGAAGCCGAATAATTCAATAGTGATCAA CTTCTTCTAAAGGAAAAGAC
Downstream 100 bases:
>100_bases AAGTCTCCGTCAGAAATTCCAGTTTGCTCAGACAGAGAATCATCGGCTTGCCCAAACTCCATATGTGGCAAGCCTTTTGT TTTCTTAATGCCAGGCCCGA
Product: transketolase
Products: NA
Alternate protein names: TK [H]
Number of amino acids: Translated: 666; Mature: 665
Protein sequence:
>666_residues MAGNSELDIDILEKIAGTIKQLSIESIQKASSGHPGMPLGCAEIAAYLYGCVLRYNSKDSQWMNRDRFVLSAGHGSALLY SCLHLAGFNVRLEDLQQFRQLHSQTPGHPEFRETDGVEATTGPLGQGIGNAVGMALSLKMLGSRFNQSSTSIFDAKVYCL AGDGCFMEGVSHEACSFAGSLGLDNLILIYDYNEIILDGTLQDVSVEDTKQRFLAYGWDVFEANGHDFEDLHRVFSQIKK GQQKPTLIIAHTIIGHGSPKEGTNKAHGSPLGEDGVAQTKSFWHLPEEKFFVPSSVKMFFAAKQQEGQKLQEEWQERFRV WSKRFPEQHQEYLKLTQEISIQDLEVLLNLIDMPESIAGRAASNKVIQVLAENIPSLIGGSADLSSSDGTWIAKETAVNA SHFQGRNIRYGVREFGMGTIMNGLAYSQVFRPFGGTFLVFSDYLRAAIRLAALSKLPVIYQFTHDSIFVGEDGPTHQPIE QIMSLRAIPGLRVVRPADAHEVKGAWLSALENSGPTALILSRQNLPTLKETKRSFRDGVGRGAYILVKEEGGSPDYTLCA SGSEVHLAMEVAQSLMALDKRVRVISFPCWELFERQDPEYRESVIGGDLGLRVSIEAGSALGWYKYIGSNGLSIAMDVFG MSGAPHEVAETCGFTVDSIVQRILSV
Sequences:
>Translated_666_residues MAGNSELDIDILEKIAGTIKQLSIESIQKASSGHPGMPLGCAEIAAYLYGCVLRYNSKDSQWMNRDRFVLSAGHGSALLY SCLHLAGFNVRLEDLQQFRQLHSQTPGHPEFRETDGVEATTGPLGQGIGNAVGMALSLKMLGSRFNQSSTSIFDAKVYCL AGDGCFMEGVSHEACSFAGSLGLDNLILIYDYNEIILDGTLQDVSVEDTKQRFLAYGWDVFEANGHDFEDLHRVFSQIKK GQQKPTLIIAHTIIGHGSPKEGTNKAHGSPLGEDGVAQTKSFWHLPEEKFFVPSSVKMFFAAKQQEGQKLQEEWQERFRV WSKRFPEQHQEYLKLTQEISIQDLEVLLNLIDMPESIAGRAASNKVIQVLAENIPSLIGGSADLSSSDGTWIAKETAVNA SHFQGRNIRYGVREFGMGTIMNGLAYSQVFRPFGGTFLVFSDYLRAAIRLAALSKLPVIYQFTHDSIFVGEDGPTHQPIE QIMSLRAIPGLRVVRPADAHEVKGAWLSALENSGPTALILSRQNLPTLKETKRSFRDGVGRGAYILVKEEGGSPDYTLCA SGSEVHLAMEVAQSLMALDKRVRVISFPCWELFERQDPEYRESVIGGDLGLRVSIEAGSALGWYKYIGSNGLSIAMDVFG MSGAPHEVAETCGFTVDSIVQRILSV >Mature_665_residues AGNSELDIDILEKIAGTIKQLSIESIQKASSGHPGMPLGCAEIAAYLYGCVLRYNSKDSQWMNRDRFVLSAGHGSALLYS CLHLAGFNVRLEDLQQFRQLHSQTPGHPEFRETDGVEATTGPLGQGIGNAVGMALSLKMLGSRFNQSSTSIFDAKVYCLA GDGCFMEGVSHEACSFAGSLGLDNLILIYDYNEIILDGTLQDVSVEDTKQRFLAYGWDVFEANGHDFEDLHRVFSQIKKG QQKPTLIIAHTIIGHGSPKEGTNKAHGSPLGEDGVAQTKSFWHLPEEKFFVPSSVKMFFAAKQQEGQKLQEEWQERFRVW SKRFPEQHQEYLKLTQEISIQDLEVLLNLIDMPESIAGRAASNKVIQVLAENIPSLIGGSADLSSSDGTWIAKETAVNAS HFQGRNIRYGVREFGMGTIMNGLAYSQVFRPFGGTFLVFSDYLRAAIRLAALSKLPVIYQFTHDSIFVGEDGPTHQPIEQ IMSLRAIPGLRVVRPADAHEVKGAWLSALENSGPTALILSRQNLPTLKETKRSFRDGVGRGAYILVKEEGGSPDYTLCAS GSEVHLAMEVAQSLMALDKRVRVISFPCWELFERQDPEYRESVIGGDLGLRVSIEAGSALGWYKYIGSNGLSIAMDVFGM SGAPHEVAETCGFTVDSIVQRILSV
Specific function: Unknown
COG id: COG0021
COG function: function code G; Transketolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transketolase family [H]
Homologues:
Organism=Homo sapiens, GI205277463, Length=676, Percent_Identity=27.3668639053254, Blast_Score=177, Evalue=3e-44, Organism=Homo sapiens, GI4507521, Length=676, Percent_Identity=27.3668639053254, Blast_Score=177, Evalue=3e-44, Organism=Homo sapiens, GI133778974, Length=279, Percent_Identity=32.9749103942652, Blast_Score=141, Evalue=2e-33, Organism=Homo sapiens, GI225637459, Length=585, Percent_Identity=23.7606837606838, Blast_Score=126, Evalue=5e-29, Organism=Homo sapiens, GI225637463, Length=502, Percent_Identity=24.3027888446215, Blast_Score=114, Evalue=3e-25, Organism=Homo sapiens, GI225637461, Length=502, Percent_Identity=24.3027888446215, Blast_Score=114, Evalue=4e-25, Organism=Escherichia coli, GI48994911, Length=658, Percent_Identity=43.7689969604863, Blast_Score=549, Evalue=1e-157, Organism=Escherichia coli, GI1788808, Length=664, Percent_Identity=43.9759036144578, Blast_Score=545, Evalue=1e-156, Organism=Caenorhabditis elegans, GI17539652, Length=574, Percent_Identity=28.0487804878049, Blast_Score=175, Evalue=6e-44, Organism=Saccharomyces cerevisiae, GI6325331, Length=667, Percent_Identity=42.5787106446777, Blast_Score=493, Evalue=1e-140, Organism=Saccharomyces cerevisiae, GI6319593, Length=671, Percent_Identity=42.9210134128167, Blast_Score=488, Evalue=1e-138, Organism=Drosophila melanogaster, GI45551847, Length=579, Percent_Identity=27.6338514680484, Blast_Score=172, Evalue=6e-43, Organism=Drosophila melanogaster, GI45550715, Length=579, Percent_Identity=27.6338514680484, Blast_Score=172, Evalue=6e-43, Organism=Drosophila melanogaster, GI24666278, Length=576, Percent_Identity=27.0833333333333, Blast_Score=161, Evalue=2e-39, Organism=Drosophila melanogaster, GI24645119, Length=538, Percent_Identity=27.5092936802974, Blast_Score=154, Evalue=1e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009014 - InterPro: IPR015941 - InterPro: IPR005475 - InterPro: IPR005478 - InterPro: IPR020826 - InterPro: IPR005476 - InterPro: IPR005474 [H]
Pfam domain/function: PF02779 Transket_pyr; PF02780 Transketolase_C; PF00456 Transketolase_N [H]
EC number: =2.2.1.1 [H]
Molecular weight: Translated: 73174; Mature: 73043
Theoretical pI: Translated: 5.70; Mature: 5.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGNSELDIDILEKIAGTIKQLSIESIQKASSGHPGMPLGCAEIAAYLYGCVLRYNSKDS CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHEECCCCH QWMNRDRFVLSAGHGSALLYSCLHLAGFNVRLEDLQQFRQLHSQTPGHPEFRETDGVEAT HHHCCCCEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCC TGPLGQGIGNAVGMALSLKMLGSRFNQSSTSIFDAKVYCLAGDGCFMEGVSHEACSFAGS CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCHHHCCCCHHHHHHHHC LGLDNLILIYDYNEIILDGTLQDVSVEDTKQRFLAYGWDVFEANGHDFEDLHRVFSQIKK CCCCCEEEEEECCEEEEECCCCCCCCHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHC GQQKPTLIIAHTIIGHGSPKEGTNKAHGSPLGEDGVAQTKSFWHLPEEKFFVPSSVKMFF CCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEECCCHHHHHH AAKQQEGQKLQEEWQERFRVWSKRFPEQHQEYLKLTQEISIQDLEVLLNLIDMPESIAGR HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHCC AASNKVIQVLAENIPSLIGGSADLSSSDGTWIAKETAVNASHFQGRNIRYGVREFGMGTI HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEHHHCCCHHHCCCCCCCCCHHHHCHHHH MNGLAYSQVFRPFGGTFLVFSDYLRAAIRLAALSKLPVIYQFTHDSIFVGEDGPTHQPIE HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEEECCCCCCHHHHH QIMSLRAIPGLRVVRPADAHEVKGAWLSALENSGPTALILSRQNLPTLKETKRSFRDGVG HHHHHHCCCCCEEECCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHCCCC RGAYILVKEEGGSPDYTLCASGSEVHLAMEVAQSLMALDKRVRVISFPCWELFERQDPEY CCEEEEEEECCCCCCEEEEECCCCEEHHHHHHHHHHHHHHCCCEEECCHHHHHHCCCCHH RESVIGGDLGLRVSIEAGSALGWYKYIGSNGLSIAMDVFGMSGAPHEVAETCGFTVDSIV HHHHHCCCCCEEEEEECCCCCHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHCCCHHHHH QRILSV HHHHCC >Mature Secondary Structure AGNSELDIDILEKIAGTIKQLSIESIQKASSGHPGMPLGCAEIAAYLYGCVLRYNSKDS CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHEECCCCH QWMNRDRFVLSAGHGSALLYSCLHLAGFNVRLEDLQQFRQLHSQTPGHPEFRETDGVEAT HHHCCCCEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCC TGPLGQGIGNAVGMALSLKMLGSRFNQSSTSIFDAKVYCLAGDGCFMEGVSHEACSFAGS CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCHHHCCCCHHHHHHHHC LGLDNLILIYDYNEIILDGTLQDVSVEDTKQRFLAYGWDVFEANGHDFEDLHRVFSQIKK CCCCCEEEEEECCEEEEECCCCCCCCHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHC GQQKPTLIIAHTIIGHGSPKEGTNKAHGSPLGEDGVAQTKSFWHLPEEKFFVPSSVKMFF CCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEECCCHHHHHH AAKQQEGQKLQEEWQERFRVWSKRFPEQHQEYLKLTQEISIQDLEVLLNLIDMPESIAGR HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHCC AASNKVIQVLAENIPSLIGGSADLSSSDGTWIAKETAVNASHFQGRNIRYGVREFGMGTI HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEHHHCCCHHHCCCCCCCCCHHHHCHHHH MNGLAYSQVFRPFGGTFLVFSDYLRAAIRLAALSKLPVIYQFTHDSIFVGEDGPTHQPIE HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEEECCCCCCHHHHH QIMSLRAIPGLRVVRPADAHEVKGAWLSALENSGPTALILSRQNLPTLKETKRSFRDGVG HHHHHHCCCCCEEECCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHCCCC RGAYILVKEEGGSPDYTLCASGSEVHLAMEVAQSLMALDKRVRVISFPCWELFERQDPEY CCEEEEEEECCCCCCEEEEECCCCEEHHHHHHHHHHHHHHCCCEEECCHHHHHHCCCCHH RESVIGGDLGLRVSIEAGSALGWYKYIGSNGLSIAMDVFGMSGAPHEVAETCGFTVDSIV HHHHHCCCCCEEEEEECCCCCHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHCCCHHHHH QRILSV HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11058132 [H]