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The map label for this gene is yajC

Identifier: 15834742

GI number: 15834742

Start: 140699

End: 141043

Strand: Reverse

Name: yajC

Synonym: TC0117

Alternate gene names: NA

Gene position: 141043-140699 (Counterclockwise)

Preceding gene: 15834743

Following gene: 15834741

Centisome position: 13.15

GC content: 38.84

Gene sequence:

>345_bases
ATGTTCTCTCGTGTGTTGTTTAGTATCCTTTTCTTTCTAGGATGTTGCCCATCTTTATTTGCAGATGTTGATTCTCCTCA
ACGAGCAACATTTGGACAGCCTGCAGTGATGTTAGGAATTGCTATCGTCTTTTTCTATTTTATCTTATGGCGACCAGAAC
AAAAACGCCGCCAAGCTATGGAAAAAAGAAAAAGCGAGTTAGCAGTTGGAGATAAAGTGACTGCTATGGGCATCGTTGGA
ACGATTGCCGAAATCCGTGAACACACTGTTGTTCTGAATATCGCTTCTGGAAAAATTGAAATCCTTAAAGCAGCTATTTC
AGAAATTTTTAAGGCTGAAAAATAA

Upstream 100 bases:

>100_bases
AGAAAGTCTTATCACTGATAGCATTACTCCTGGAAAAGGATTGATCCCCCTATGTTCCTGTGTTAACCTATCCTTTTTAA
CCCTAATAAAAGGTACCTTG

Downstream 100 bases:

>100_bases
AATTGAATCCCTTTGAGCGAAGCCCAAAGAAAGGGCTTTGCTTCCTAGTAATAAAACTCTAAAAAACTCCATTGATTTTT
TATGAAGTAAACTATAAGTT

Product: preprotein translocase subunit YajC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 114; Mature: 114

Protein sequence:

>114_residues
MFSRVLFSILFFLGCCPSLFADVDSPQRATFGQPAVMLGIAIVFFYFILWRPEQKRRQAMEKRKSELAVGDKVTAMGIVG
TIAEIREHTVVLNIASGKIEILKAAISEIFKAEK

Sequences:

>Translated_114_residues
MFSRVLFSILFFLGCCPSLFADVDSPQRATFGQPAVMLGIAIVFFYFILWRPEQKRRQAMEKRKSELAVGDKVTAMGIVG
TIAEIREHTVVLNIASGKIEILKAAISEIFKAEK
>Mature_114_residues
MFSRVLFSILFFLGCCPSLFADVDSPQRATFGQPAVMLGIAIVFFYFILWRPEQKRRQAMEKRKSELAVGDKVTAMGIVG
TIAEIREHTVVLNIASGKIEILKAAISEIFKAEK

Specific function: Unknown

COG id: COG1862

COG function: function code U; Preprotein translocase subunit YajC

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0092 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y117_CHLMU (Q9PLI2)

Other databases:

- EMBL:   AE002160
- PIR:   A81739
- RefSeq:   NP_296501.1
- GeneID:   1245651
- GenomeReviews:   AE002160_GR
- KEGG:   cmu:TC0117
- TIGR:   TC_0117
- HOGENOM:   HBG730023
- OMA:   DILPEAD
- ProtClustDB:   PRK05585
- BioCyc:   CMUR243161:TC_0117-MONOMER
- InterPro:   IPR003849
- PRINTS:   PR01853
- TIGRFAMs:   TIGR00739

Pfam domain/function: PF02699 YajC

EC number: NA

Molecular weight: Translated: 12754; Mature: 12754

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xbf9294c)-;

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSRVLFSILFFLGCCPSLFADVDSPQRATFGQPAVMLGIAIVFFYFILWRPEQKRRQAM
CHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHH
EKRKSELAVGDKVTAMGIVGTIAEIREHTVVLNIASGKIEILKAAISEIFKAEK
HHHHHHHHCCCHHHHHHHHHHHHHHHHCEEEEEECCCHHHHHHHHHHHHHHCCH
>Mature Secondary Structure
MFSRVLFSILFFLGCCPSLFADVDSPQRATFGQPAVMLGIAIVFFYFILWRPEQKRRQAM
CHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHH
EKRKSELAVGDKVTAMGIVGTIAEIREHTVVLNIASGKIEILKAAISEIFKAEK
HHHHHHHHCCCHHHHHHHHHHHHHHHHCEEEEEECCCHHHHHHHHHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10684935