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Identifier: 15834735

GI number: 15834735

Start: 129214

End: 129873

Strand: Reverse

Name: Not Available

Synonym: TC0110

Alternate gene names: NA

Gene position: 129873-129214 (Counterclockwise)

Preceding gene: 15834736

Following gene: 15834731

Centisome position: 12.1

GC content: 43.03

Gene sequence:

>660_bases
ATGACCATTAGCTGCACTCAAGACACCCTATATCTCTCTTTACATGGAGGGGTTGCCTCCGCCAACCCTTATCCCATATC
AAGAGTGGAGAAACTTTTACAGTTCTCGTTTCTTCCCCAACTTCAATTCCAAGATCCCGTAATAGAAAAACGAATACAAC
GACTATGTTACCGAGAAGAAAAACGCCTAGCTATTTCCTCTTTAACAAAATGGTTGGGGCAATTACATAAGCAGCAACTC
CGAGCTCCTACAATCCCTCCTGTTGCCATCTGTTGGATTGATGCTCTTATAGGATATGGAGTTTTTGCTCGCGAATTCAT
TCCTGCATGGAGCTATATCGGGGAATACACGGGAATTTTGCGTAGACGACAAGCTCTTTGGTTAGATGAAAATGATTACT
GCTTTCGCTATCCAGTCCCCCGCCATTCCTTTCGATATTTTACCATCGATAGTGGGAAGCTAGGGAACATTACCCGCTTT
ATTAATCACAGCGATAACCCCAACCTAGAAGCTGTTGGGGCTTTTGAAAATGGCATATTCCATATTATTATTCGGGCTAT
CAAAGACATTTTTCCTGGAGAGGAACTCTGCTATCACTACGGTCCGTTATATTGGAAACACCGCAAAAAGCGAGAGGAGT
TTATCCCTCAAGAAGAGTAA

Upstream 100 bases:

>100_bases
CTGTGTCCTCTGCTATTCAAGATATCACAAATGTTCGCCCAATAATTGCTCAAAGCTCTGGTATCACAGATCCTGTTTTC
TTTTCTTCTCCGAGCCTTGT

Downstream 100 bases:

>100_bases
TCTCTCTAATCTTGTTCATAAGTGCCCATCAGTTCCGCTGTGGCAAGGATATGTCCTTCCATAGCCTCTAACAACTGTTC
TTTTGTTACTCCCTCTTCTT

Product: hypothetical protein

Products: NA

Alternate protein names: Nuclear Protein SET; SET Domain Protein; SET Domain Containing Protein

Number of amino acids: Translated: 219; Mature: 218

Protein sequence:

>219_residues
MTISCTQDTLYLSLHGGVASANPYPISRVEKLLQFSFLPQLQFQDPVIEKRIQRLCYREEKRLAISSLTKWLGQLHKQQL
RAPTIPPVAICWIDALIGYGVFAREFIPAWSYIGEYTGILRRRQALWLDENDYCFRYPVPRHSFRYFTIDSGKLGNITRF
INHSDNPNLEAVGAFENGIFHIIIRAIKDIFPGEELCYHYGPLYWKHRKKREEFIPQEE

Sequences:

>Translated_219_residues
MTISCTQDTLYLSLHGGVASANPYPISRVEKLLQFSFLPQLQFQDPVIEKRIQRLCYREEKRLAISSLTKWLGQLHKQQL
RAPTIPPVAICWIDALIGYGVFAREFIPAWSYIGEYTGILRRRQALWLDENDYCFRYPVPRHSFRYFTIDSGKLGNITRF
INHSDNPNLEAVGAFENGIFHIIIRAIKDIFPGEELCYHYGPLYWKHRKKREEFIPQEE
>Mature_218_residues
TISCTQDTLYLSLHGGVASANPYPISRVEKLLQFSFLPQLQFQDPVIEKRIQRLCYREEKRLAISSLTKWLGQLHKQQLR
APTIPPVAICWIDALIGYGVFAREFIPAWSYIGEYTGILRRRQALWLDENDYCFRYPVPRHSFRYFTIDSGKLGNITRFI
NHSDNPNLEAVGAFENGIFHIIIRAIKDIFPGEELCYHYGPLYWKHRKKREEFIPQEE

Specific function: Unknown

COG id: COG2940

COG function: function code R; Proteins containing SET domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25711; Mature: 25580

Theoretical pI: Translated: 8.67; Mature: 8.67

Prosite motif: PS50280 SET

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTISCTQDTLYLSLHGGVASANPYPISRVEKLLQFSFLPQLQFQDPVIEKRIQRLCYREE
CEEECCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
KRLAISSLTKWLGQLHKQQLRAPTIPPVAICWIDALIGYGVFAREFIPAWSYIGEYTGIL
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRRQALWLDENDYCFRYPVPRHSFRYFTIDSGKLGNITRFINHSDNPNLEAVGAFENGIF
HHHHHHEECCCCCEEECCCCCCCEEEEEECCCCCCCHHHHHCCCCCCCEEEEECHHCCHH
HIIIRAIKDIFPGEELCYHYGPLYWKHRKKREEFIPQEE
HHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
TISCTQDTLYLSLHGGVASANPYPISRVEKLLQFSFLPQLQFQDPVIEKRIQRLCYREE
EEECCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
KRLAISSLTKWLGQLHKQQLRAPTIPPVAICWIDALIGYGVFAREFIPAWSYIGEYTGIL
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRRQALWLDENDYCFRYPVPRHSFRYFTIDSGKLGNITRFINHSDNPNLEAVGAFENGIF
HHHHHHEECCCCCEEECCCCCCCEEEEEECCCCCCCHHHHHCCCCCCCEEEEECHHCCHH
HIIIRAIKDIFPGEELCYHYGPLYWKHRKKREEFIPQEE
HHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA