| Definition | Chlamydia muridarum Nigg, complete genome. |
|---|---|
| Accession | NC_002620 |
| Length | 1,072,950 |
Click here to switch to the map view.
The map label for this gene is Not Available
Identifier: 15834732
GI number: 15834732
Start: 126557
End: 127213
Strand: Direct
Name: Not Available
Synonym: TC0107
Alternate gene names: NA
Gene position: 126557-127213 (Clockwise)
Preceding gene: 15834730
Following gene: 15834733
Centisome position: 11.8
GC content: 44.9
Gene sequence:
>657_bases ATGAAAAAGTTTGTCTATAAGTACAGTTTTGGGGCTTTATTGCTGCTCTCTGGATTGAGTAGTTGTTGCCCTAGCTCTTA TGGATCGACTCCTGCAAAAAATACAGCTGAGATAAAAGAGGAATCTGTTATACTCCGCGAAGAGCCGGAATCCGGCTGTA AGAAGAAATCTTCTTGCTGCTTACGAAAATTTTTCTCACGCAAGAAACCAAAAGAGAAACCAGAGCCTGTGTTGCCGAAC TTTAAGTCTTACGCAGATCCGATGACAGATGCCGAAAGAAAGGACCTTTCTTTTGTAGTGTCTGCTGCTGCTGAGAAGTC TTCTATTGCTTTGGCAATGGCTCAGGGGGAGATCAAAGGAGCTTTGTCTCGTATTAGAGAGATACACCCTCTTGTATTGC TTCAGGCTCTTGCGGAAGATCCTGCTTTGATTGCTGGAATGAAAAAAATGCAAGGACGCGATTGGGTCTGGAATATCTTC ATGACAGAGTTAAGCAAAGCTTTCTCTCAAGCAGCATCTTTAGGGGCTTTCAGCGTTGCGGACGTTGCTGCGTTCGCGTC AACCTTGGGATTAGACTCGGGGACCGTTACCTCAATTGTTGATGGGGAAAGGTGGGCTGAGCTGATCGATGTTGTAATTC AGAGCCCTACTATATAA
Upstream 100 bases:
>100_bases TTTATTTAATCTATGGCTAAAAATGAAGCTTTTATTAACTACTTAGTTAATAAGATTTGTGTTATAATATTACAAATTTA TTTTTAATTTAGTAGGTTTT
Downstream 100 bases:
>100_bases GGCCACTTTGTTCTATAGGCCCCCTTTCCCCAGATAGGAGAAAGGGGGCTTTTGTATTATTCCGCTTATTTGCCTCCGAG GCGGATGCAAAATAAAAGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 218; Mature: 218
Protein sequence:
>218_residues MKKFVYKYSFGALLLLSGLSSCCPSSYGSTPAKNTAEIKEESVILREEPESGCKKKSSCCLRKFFSRKKPKEKPEPVLPN FKSYADPMTDAERKDLSFVVSAAAEKSSIALAMAQGEIKGALSRIREIHPLVLLQALAEDPALIAGMKKMQGRDWVWNIF MTELSKAFSQAASLGAFSVADVAAFASTLGLDSGTVTSIVDGERWAELIDVVIQSPTI
Sequences:
>Translated_218_residues MKKFVYKYSFGALLLLSGLSSCCPSSYGSTPAKNTAEIKEESVILREEPESGCKKKSSCCLRKFFSRKKPKEKPEPVLPN FKSYADPMTDAERKDLSFVVSAAAEKSSIALAMAQGEIKGALSRIREIHPLVLLQALAEDPALIAGMKKMQGRDWVWNIF MTELSKAFSQAASLGAFSVADVAAFASTLGLDSGTVTSIVDGERWAELIDVVIQSPTI >Mature_218_residues MKKFVYKYSFGALLLLSGLSSCCPSSYGSTPAKNTAEIKEESVILREEPESGCKKKSSCCLRKFFSRKKPKEKPEPVLPN FKSYADPMTDAERKDLSFVVSAAAEKSSIALAMAQGEIKGALSRIREIHPLVLLQALAEDPALIAGMKKMQGRDWVWNIF MTELSKAFSQAASLGAFSVADVAAFASTLGLDSGTVTSIVDGERWAELIDVVIQSPTI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chlamydial CPn_0875/CT_734/TC_0107 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23665; Mature: 23665
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKFVYKYSFGALLLLSGLSSCCPSSYGSTPAKNTAEIKEESVILREEPESGCKKKSSCC CCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHEECCCHHHHHHHHHHH LRKFFSRKKPKEKPEPVLPNFKSYADPMTDAERKDLSFVVSAAAEKSSIALAMAQGEIKG HHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHH ALSRIREIHPLVLLQALAEDPALIAGMKKMQGRDWVWNIFMTELSKAFSQAASLGAFSVA HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHH DVAAFASTLGLDSGTVTSIVDGERWAELIDVVIQSPTI HHHHHHHHHCCCCCCHHHHHCHHHHHHHHHHHHCCCCC >Mature Secondary Structure MKKFVYKYSFGALLLLSGLSSCCPSSYGSTPAKNTAEIKEESVILREEPESGCKKKSSCC CCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHEECCCHHHHHHHHHHH LRKFFSRKKPKEKPEPVLPNFKSYADPMTDAERKDLSFVVSAAAEKSSIALAMAQGEIKG HHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHH ALSRIREIHPLVLLQALAEDPALIAGMKKMQGRDWVWNIFMTELSKAFSQAASLGAFSVA HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHH DVAAFASTLGLDSGTVTSIVDGERWAELIDVVIQSPTI HHHHHHHHHCCCCCCHHHHHCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9784136 [H]