| Definition | Chlamydia muridarum Nigg, complete genome. |
|---|---|
| Accession | NC_002620 |
| Length | 1,072,950 |
Click here to switch to the map view.
The map label for this gene is Not Available
Identifier: 15834726
GI number: 15834726
Start: 119721
End: 120467
Strand: Reverse
Name: Not Available
Synonym: TC0101
Alternate gene names: NA
Gene position: 120467-119721 (Counterclockwise)
Preceding gene: 15834727
Following gene: 15834725
Centisome position: 11.23
GC content: 41.77
Gene sequence:
>747_bases ATGACATCGGAATATGAACACTTTGGGAACTTATCCCCAGAAGAACATATTAAAGACGTGCAGGATATGCACAAAGTCTG TAAAGGAGAGCCGCATCAAACAAAGAAAGGCTGTTGGTATCACTTAGCTCATGATGCTATAGATTGCGGTGTTTTTATAT TTTTCATTCGCACAGTATTTTTCCTTGTCCCAACGATCCCCGTGTTTTCTTATGGGAAAATCCTTTTTACAACAGGGTTA AGTTGGGTTTTTTACACCGCTTGTAGACGAGCTCAATCAGCTTGGGCTTACATGGAGCTTACCCATAGAAATATGCTACA GGAAAAAAAAGAGATCGAGGAACACCCAGAACAAGAGCGCATAGAATTAAAAGTTCTTTATGCTAATCAAGGGTTCCAGG AGCCTTTAATCTCACAAATGGTGGACTTTGTGTGTGCGGACTCTTCTCTTCTTTTGAACACAATGCTTAGAGAAGAACTC CACATCCAATTTGAGGACTACCCTCATCCTCTTAAACAGGGGAGCGTTAAAGCGTGTGGAGGGCTTCTTGGCCTACTCTT ATTTTCCCCAATAGCTCTTACCGTAAGCTATACAATAGCCGCCCTTCTAACTTCTATTATTATTGGTGCTCTACTTGCAC TGAAAGCCCGTCTTATAAAAAATGCTGTTACCCCCGCAATTGTCTGGGGAGTAGGAATGTTTATTACTGCGATCAGCCTG TGCTGTTCTTTGATACGGTTATTCTAG
Upstream 100 bases:
>100_bases CTCATGCGCTGCGCCCTTATATGAATAACCAAGAAATTCTCCTACCCAAAACAGATAGATAATTCTATAGTGAGATCGAA AGGGACAAGAGATAGAATTT
Downstream 100 bases:
>100_bases TCTAGACTCCTAGTAGGTATCCTATGCTCCCACAACTTTTCTCTTCTCCATTTTCACGGGAATTACTCAACGATTTTTTT GAATCAGGGATGGCAGAGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 248; Mature: 247
Protein sequence:
>248_residues MTSEYEHFGNLSPEEHIKDVQDMHKVCKGEPHQTKKGCWYHLAHDAIDCGVFIFFIRTVFFLVPTIPVFSYGKILFTTGL SWVFYTACRRAQSAWAYMELTHRNMLQEKKEIEEHPEQERIELKVLYANQGFQEPLISQMVDFVCADSSLLLNTMLREEL HIQFEDYPHPLKQGSVKACGGLLGLLLFSPIALTVSYTIAALLTSIIIGALLALKARLIKNAVTPAIVWGVGMFITAISL CCSLIRLF
Sequences:
>Translated_248_residues MTSEYEHFGNLSPEEHIKDVQDMHKVCKGEPHQTKKGCWYHLAHDAIDCGVFIFFIRTVFFLVPTIPVFSYGKILFTTGL SWVFYTACRRAQSAWAYMELTHRNMLQEKKEIEEHPEQERIELKVLYANQGFQEPLISQMVDFVCADSSLLLNTMLREEL HIQFEDYPHPLKQGSVKACGGLLGLLLFSPIALTVSYTIAALLTSIIIGALLALKARLIKNAVTPAIVWGVGMFITAISL CCSLIRLF >Mature_247_residues TSEYEHFGNLSPEEHIKDVQDMHKVCKGEPHQTKKGCWYHLAHDAIDCGVFIFFIRTVFFLVPTIPVFSYGKILFTTGLS WVFYTACRRAQSAWAYMELTHRNMLQEKKEIEEHPEQERIELKVLYANQGFQEPLISQMVDFVCADSSLLLNTMLREELH IQFEDYPHPLKQGSVKACGGLLGLLLFSPIALTVSYTIAALLTSIIIGALLALKARLIKNAVTPAIVWGVGMFITAISLC CSLIRLF
Specific function: Unknown
COG id: COG1814
COG function: function code S; Uncharacterized membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28101; Mature: 27970
Theoretical pI: Translated: 6.84; Mature: 6.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSEYEHFGNLSPEEHIKDVQDMHKVCKGEPHQTKKGCWYHLAHDAIDCGVFIFFIRTVF CCCCCCHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH FLVPTIPVFSYGKILFTTGLSWVFYTACRRAQSAWAYMELTHRNMLQEKKEIEEHPEQER HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH IELKVLYANQGFQEPLISQMVDFVCADSSLLLNTMLREELHIQFEDYPHPLKQGSVKACG HEEEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHCCCHHHHH GLLGLLLFSPIALTVSYTIAALLTSIIIGALLALKARLIKNAVTPAIVWGVGMFITAISL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CCSLIRLF HHHHHHHC >Mature Secondary Structure TSEYEHFGNLSPEEHIKDVQDMHKVCKGEPHQTKKGCWYHLAHDAIDCGVFIFFIRTVF CCCCCHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH FLVPTIPVFSYGKILFTTGLSWVFYTACRRAQSAWAYMELTHRNMLQEKKEIEEHPEQER HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH IELKVLYANQGFQEPLISQMVDFVCADSSLLLNTMLREELHIQFEDYPHPLKQGSVKACG HEEEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHCCCHHHHH GLLGLLLFSPIALTVSYTIAALLTSIIIGALLALKARLIKNAVTPAIVWGVGMFITAISL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CCSLIRLF HHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA