| Definition | Chlamydia muridarum Nigg, complete genome. |
|---|---|
| Accession | NC_002620 |
| Length | 1,072,950 |
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Identifier: 15834725
GI number: 15834725
Start: 117718
End: 119697
Strand: Reverse
Name: Not Available
Synonym: TC0100
Alternate gene names: 15834725
Gene position: 119697-117718 (Counterclockwise)
Preceding gene: 15834726
Following gene: 15834724
Centisome position: 11.16
GC content: 43.33
Gene sequence:
>1980_bases ATGCTCCCACAACTTTTCTCTTCTCCATTTTCACGGGAATTACTCAACGATTTTTTTGAATCAGGGATGGCAGAGGAAAA CAGTCCTTTACTTTCCCGAAAGAATCGTCTTTTAAGCCAAAACTTAACCCTAAAATCTGCCTACATATCCCTTGCTCTTT ATATAGGGTCGCTTCTTTCTCATTGGACCGGATATCAGCCTCTCTCTTCTTTGCTACTTATTCTTACTTTCTTCCTAGCT GGAACGCCTGCCCTCGTAAAATCTTTTGAGGATATTCTTAATAAAACGGTGAATATCGATATTCTCATGACATCTGCAGC TTTCGGCTCTATTTTCATTGGAGGAGCCTTAGAAGGCGCATTGCTTTTAGTACTTTTCGCTATTTCAGAATCTCTAGGAT CGATGGTCTCAGGGAAAGCCAAAAGTACTCTCGCTTCTTTAAAACATTTGGCACCTACTGTAGCTTGGGTTGTTCAACAA GATGGCTCATTACAAAAGATTTTAGTACAAAATGTAAAAGTCGGAGAGGTTATCCGAGTTAAGAGTGGAGAGGTTGTCCC TTTAGATGGAGAAATTATCCAAGGAGCCTCCTCTATTAATCTGATGCATCTAACAGGAGAAAAGATTCCCAAATCTTGTA ATATTGGGGATACGGTTCCCGCAGGAGCTCATAACTTAGAAGGAAGTTTTGACCTCAAAGTTCTTAGAATTGGAGCAGAG TCCACCATTGCCCACATCATCAATCTTGTTATCCAAGCACAAAGCGCTAAACCTAAACTCCAGCAACGTTTAGATCGTTA CTCATCAACGTATGCCTTAACAATCTTCGCGATCTCAGCCTCTATAGCAATAGGCGGTTCATTATTTACGACACTGCCTT TCCTAGGGCCAGACAGTGCTTTTTACCGAGCCTTAGCCTTCTTAATTGCAGCTTCTCCTTGTGCCCTTATCATAGCTATC CCTATTGCCTATCTCAGCACCATTAATGCCTGTGCCAAACATGGAGTTTTACTAAAGGGAGGCGTAGTCTTAGATCGCTT AGTCTCTTGCAACTCCGTAGTGATGGATAAGACTGGGACACTGACTACCGGAGACTTAACCTGCTGTGGATGTGAAGATT TTGGCCCTGAATCCCCTCTTTTTTACTCCTATGTGCTAGCAATGGAACAATCTTCGTCCCACCCCATTGCTCAGGCAATT GTTAATTATCTAACAGAGAAACAAGTGCTTCCCCTACCGGCAACACAATGTACTACCATTCCAGGCGAGGGTGTACAAGG AGAATTTAATGGAGATCAGGCCTTTGTTGGACGAGTCTCAACAGCCCTACGCTATGTCCCTGAAGAATATCGAGAACAAC TTCGCGAACGTGCTCAACAAGCACAAGCGCGAGGAGAGACCTGTTCCATTGCTTGCTCTGGGCAACGCGTGTCTCTTTTT TACTTTCGAGATGCCCCGCGCCATGATGCTGCAGATATTGTCGCCTATTTGAAAAAAAATGGTTATCCAGTATGCATGCT CACAGGAGATCATCGTATTAGCGCAGAAAACACAGCTCAACTGCTTGGAATTGATGAAGTGTTCTACGATCTAACCCCAG ATAATAAACTTTCTAAAATCCAAGAACTCGCAAAGACTCGACAAATCATGATGGTGGGAGATGGAATTAATGATGCCCCG GCTCTAGCGCAAGCTACTGTAGGGATCGCTATGGGGGAAGCTGGCAGCGCAACAGCCATAGAAGCTGCTGATGTAGTTCT CTTAAACCAAGGGCTCTCTTCTCTTCCCTGGCTGATAAAAAAAGCAAAAAAGACTCGCCGAATTGTGTCGCAAAATCTTG CTTTGGCTTTATCTATTATTTTATTTATTTCAGGACCAGCATCTATGGGAATCATTCCTTTATGGCTTGCCGTAATTTTA CATGAAGGAAGTACCGTGATTGTGGGCCTTAATGCTCTTCGCCTTTTAAAAAACACGTGA
Upstream 100 bases:
>100_bases CCCCCGCAATTGTCTGGGGAGTAGGAATGTTTATTACTGCGATCAGCCTGTGCTGTTCTTTGATACGGTTATTCTAGTCT AGACTCCTAGTAGGTATCCT
Downstream 100 bases:
>100_bases TTTCCTTGTGATTTTTAGAGAAAGGAACGCATAACATCCCTTGTATGAAAAACACCAAATACTTACGCCAAGTGAACTTA TGGATCTTTGTAGTGATCAT
Product: cation transporter E1-E2 family ATPase
Products: NA
Alternate protein names: Cadmium efflux ATPase [H]
Number of amino acids: Translated: 659; Mature: 659
Protein sequence:
>659_residues MLPQLFSSPFSRELLNDFFESGMAEENSPLLSRKNRLLSQNLTLKSAYISLALYIGSLLSHWTGYQPLSSLLLILTFFLA GTPALVKSFEDILNKTVNIDILMTSAAFGSIFIGGALEGALLLVLFAISESLGSMVSGKAKSTLASLKHLAPTVAWVVQQ DGSLQKILVQNVKVGEVIRVKSGEVVPLDGEIIQGASSINLMHLTGEKIPKSCNIGDTVPAGAHNLEGSFDLKVLRIGAE STIAHIINLVIQAQSAKPKLQQRLDRYSSTYALTIFAISASIAIGGSLFTTLPFLGPDSAFYRALAFLIAASPCALIIAI PIAYLSTINACAKHGVLLKGGVVLDRLVSCNSVVMDKTGTLTTGDLTCCGCEDFGPESPLFYSYVLAMEQSSSHPIAQAI VNYLTEKQVLPLPATQCTTIPGEGVQGEFNGDQAFVGRVSTALRYVPEEYREQLRERAQQAQARGETCSIACSGQRVSLF YFRDAPRHDAADIVAYLKKNGYPVCMLTGDHRISAENTAQLLGIDEVFYDLTPDNKLSKIQELAKTRQIMMVGDGINDAP ALAQATVGIAMGEAGSATAIEAADVVLLNQGLSSLPWLIKKAKKTRRIVSQNLALALSIILFISGPASMGIIPLWLAVIL HEGSTVIVGLNALRLLKNT
Sequences:
>Translated_659_residues MLPQLFSSPFSRELLNDFFESGMAEENSPLLSRKNRLLSQNLTLKSAYISLALYIGSLLSHWTGYQPLSSLLLILTFFLA GTPALVKSFEDILNKTVNIDILMTSAAFGSIFIGGALEGALLLVLFAISESLGSMVSGKAKSTLASLKHLAPTVAWVVQQ DGSLQKILVQNVKVGEVIRVKSGEVVPLDGEIIQGASSINLMHLTGEKIPKSCNIGDTVPAGAHNLEGSFDLKVLRIGAE STIAHIINLVIQAQSAKPKLQQRLDRYSSTYALTIFAISASIAIGGSLFTTLPFLGPDSAFYRALAFLIAASPCALIIAI PIAYLSTINACAKHGVLLKGGVVLDRLVSCNSVVMDKTGTLTTGDLTCCGCEDFGPESPLFYSYVLAMEQSSSHPIAQAI VNYLTEKQVLPLPATQCTTIPGEGVQGEFNGDQAFVGRVSTALRYVPEEYREQLRERAQQAQARGETCSIACSGQRVSLF YFRDAPRHDAADIVAYLKKNGYPVCMLTGDHRISAENTAQLLGIDEVFYDLTPDNKLSKIQELAKTRQIMMVGDGINDAP ALAQATVGIAMGEAGSATAIEAADVVLLNQGLSSLPWLIKKAKKTRRIVSQNLALALSIILFISGPASMGIIPLWLAVIL HEGSTVIVGLNALRLLKNT >Mature_659_residues MLPQLFSSPFSRELLNDFFESGMAEENSPLLSRKNRLLSQNLTLKSAYISLALYIGSLLSHWTGYQPLSSLLLILTFFLA GTPALVKSFEDILNKTVNIDILMTSAAFGSIFIGGALEGALLLVLFAISESLGSMVSGKAKSTLASLKHLAPTVAWVVQQ DGSLQKILVQNVKVGEVIRVKSGEVVPLDGEIIQGASSINLMHLTGEKIPKSCNIGDTVPAGAHNLEGSFDLKVLRIGAE STIAHIINLVIQAQSAKPKLQQRLDRYSSTYALTIFAISASIAIGGSLFTTLPFLGPDSAFYRALAFLIAASPCALIIAI PIAYLSTINACAKHGVLLKGGVVLDRLVSCNSVVMDKTGTLTTGDLTCCGCEDFGPESPLFYSYVLAMEQSSSHPIAQAI VNYLTEKQVLPLPATQCTTIPGEGVQGEFNGDQAFVGRVSTALRYVPEEYREQLRERAQQAQARGETCSIACSGQRVSLF YFRDAPRHDAADIVAYLKKNGYPVCMLTGDHRISAENTAQLLGIDEVFYDLTPDNKLSKIQELAKTRQIMMVGDGINDAP ALAQATVGIAMGEAGSATAIEAADVVLLNQGLSSLPWLIKKAKKTRRIVSQNLALALSIILFISGPASMGIIPLWLAVIL HEGSTVIVGLNALRLLKNT
Specific function: This electroneutral antiporter ejects one cadmium ion while accumulating two protons by an energy-dependent efflux mechanism [H]
COG id: COG2217
COG function: function code P; Cation transport ATPase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HMA domain [H]
Homologues:
Organism=Homo sapiens, GI55743071, Length=641, Percent_Identity=29.4851794071763, Blast_Score=211, Evalue=2e-54, Organism=Homo sapiens, GI115529486, Length=674, Percent_Identity=27.7448071216617, Blast_Score=201, Evalue=1e-51, Organism=Homo sapiens, GI55743073, Length=545, Percent_Identity=29.7247706422018, Blast_Score=186, Evalue=4e-47, Organism=Escherichia coli, GI1789879, Length=644, Percent_Identity=31.6770186335404, Blast_Score=253, Evalue=2e-68, Organism=Escherichia coli, GI1786691, Length=555, Percent_Identity=33.8738738738739, Blast_Score=231, Evalue=1e-61, Organism=Escherichia coli, GI1786914, Length=533, Percent_Identity=27.3921200750469, Blast_Score=118, Evalue=1e-27, Organism=Caenorhabditis elegans, GI17556548, Length=573, Percent_Identity=29.3193717277487, Blast_Score=163, Evalue=2e-40, Organism=Caenorhabditis elegans, GI71997262, Length=184, Percent_Identity=29.8913043478261, Blast_Score=75, Evalue=1e-13, Organism=Caenorhabditis elegans, GI71997269, Length=187, Percent_Identity=29.9465240641711, Blast_Score=75, Evalue=1e-13, Organism=Caenorhabditis elegans, GI71997275, Length=184, Percent_Identity=29.8913043478261, Blast_Score=75, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17557486, Length=160, Percent_Identity=32.5, Blast_Score=74, Evalue=4e-13, Organism=Caenorhabditis elegans, GI17557770, Length=160, Percent_Identity=31.25, Blast_Score=73, Evalue=5e-13, Organism=Caenorhabditis elegans, GI32566766, Length=160, Percent_Identity=31.25, Blast_Score=73, Evalue=6e-13, Organism=Saccharomyces cerevisiae, GI6320475, Length=545, Percent_Identity=29.5412844036697, Blast_Score=196, Evalue=1e-50, Organism=Saccharomyces cerevisiae, GI6319772, Length=594, Percent_Identity=26.7676767676768, Blast_Score=172, Evalue=2e-43, Organism=Saccharomyces cerevisiae, GI6325221, Length=615, Percent_Identity=23.0894308943089, Blast_Score=95, Evalue=3e-20, Organism=Saccharomyces cerevisiae, GI6321430, Length=619, Percent_Identity=22.2940226171244, Blast_Score=89, Evalue=2e-18, Organism=Saccharomyces cerevisiae, GI6321271, Length=663, Percent_Identity=21.4177978883861, Blast_Score=82, Evalue=2e-16, Organism=Drosophila melanogaster, GI221329854, Length=423, Percent_Identity=28.8416075650118, Blast_Score=117, Evalue=3e-26, Organism=Drosophila melanogaster, GI24668704, Length=148, Percent_Identity=31.7567567567568, Blast_Score=74, Evalue=3e-13, Organism=Drosophila melanogaster, GI281366617, Length=148, Percent_Identity=31.7567567567568, Blast_Score=74, Evalue=3e-13, Organism=Drosophila melanogaster, GI24668708, Length=148, Percent_Identity=31.7567567567568, Blast_Score=74, Evalue=3e-13, Organism=Drosophila melanogaster, GI161085803, Length=148, Percent_Identity=31.7567567567568, Blast_Score=74, Evalue=4e-13, Organism=Drosophila melanogaster, GI24668696, Length=148, Percent_Identity=31.7567567567568, Blast_Score=74, Evalue=4e-13, Organism=Drosophila melanogaster, GI17136664, Length=211, Percent_Identity=27.0142180094787, Blast_Score=70, Evalue=4e-12, Organism=Drosophila melanogaster, GI24762455, Length=211, Percent_Identity=27.0142180094787, Blast_Score=70, Evalue=4e-12, Organism=Drosophila melanogaster, GI24762453, Length=211, Percent_Identity=27.0142180094787, Blast_Score=70, Evalue=4e-12, Organism=Drosophila melanogaster, GI24762447, Length=211, Percent_Identity=27.0142180094787, Blast_Score=70, Evalue=4e-12, Organism=Drosophila melanogaster, GI24762457, Length=211, Percent_Identity=27.0142180094787, Blast_Score=70, Evalue=4e-12, Organism=Drosophila melanogaster, GI24762449, Length=211, Percent_Identity=27.0142180094787, Blast_Score=70, Evalue=4e-12, Organism=Drosophila melanogaster, GI24762445, Length=211, Percent_Identity=27.0142180094787, Blast_Score=70, Evalue=4e-12, Organism=Drosophila melanogaster, GI24762451, Length=211, Percent_Identity=27.0142180094787, Blast_Score=70, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008250 - InterPro: IPR001366 - InterPro: IPR006404 - InterPro: IPR006416 - InterPro: IPR001757 - InterPro: IPR018303 - InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR017969 - InterPro: IPR006121 [H]
Pfam domain/function: PF00122 E1-E2_ATPase; PF00403 HMA; PF00702 Hydrolase [H]
EC number: =3.6.3.3 [H]
Molecular weight: Translated: 70574; Mature: 70574
Theoretical pI: Translated: 7.02; Mature: 7.02
Prosite motif: PS00154 ATPASE_E1_E2 ; PS01229 COF_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPQLFSSPFSRELLNDFFESGMAEENSPLLSRKNRLLSQNLTLKSAYISLALYIGSLLS CCCHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH HWTGYQPLSSLLLILTFFLAGTPALVKSFEDILNKTVNIDILMTSAAFGSIFIGGALEGA HCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEEEEECCCCCCEEECHHHHHH LLLVLFAISESLGSMVSGKAKSTLASLKHLAPTVAWVVQQDGSLQKILVQNVKVGEVIRV HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHCCCCCCCEEEE KSGEVVPLDGEIIQGASSINLMHLTGEKIPKSCNIGDTVPAGAHNLEGSFDLKVLRIGAE CCCCEEECCHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCH STIAHIINLVIQAQSAKPKLQQRLDRYSSTYALTIFAISASIAIGGSLFTTLPFLGPDSA HHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEEEEEEHHHHCCCHHHHHCCCCCCCHH FYRALAFLIAASPCALIIAIPIAYLSTINACAKHGVLLKGGVVLDRLVSCNSVVMDKTGT HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHCCCCEEECCCCC LTTGDLTCCGCEDFGPESPLFYSYVLAMEQSSSHPIAQAIVNYLTEKQVLPLPATQCTTI EEECCEEEECCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCC PGEGVQGEFNGDQAFVGRVSTALRYVPEEYREQLRERAQQAQARGETCSIACSGQRVSLF CCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEE YFRDAPRHDAADIVAYLKKNGYPVCMLTGDHRISAENTAQLLGIDEVFYDLTPDNKLSKI EECCCCCCCHHHHHHHHHCCCCEEEEEECCCEECCCCHHHHEEHHHHHHCCCCCHHHHHH QELAKTRQIMMVGDGINDAPALAQATVGIAMGEAGSATAIEAADVVLLNQGLSSLPWLIK HHHHHHCEEEEEECCCCCCHHHHHHHHHEEECCCCCCCEEHHHHHHEECCCHHHHHHHHH KAKKTRRIVSQNLALALSIILFISGPASMGIIPLWLAVILHEGSTVIVGLNALRLLKNT HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHCC >Mature Secondary Structure MLPQLFSSPFSRELLNDFFESGMAEENSPLLSRKNRLLSQNLTLKSAYISLALYIGSLLS CCCHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH HWTGYQPLSSLLLILTFFLAGTPALVKSFEDILNKTVNIDILMTSAAFGSIFIGGALEGA HCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEEEEECCCCCCEEECHHHHHH LLLVLFAISESLGSMVSGKAKSTLASLKHLAPTVAWVVQQDGSLQKILVQNVKVGEVIRV HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHCCCCCCCEEEE KSGEVVPLDGEIIQGASSINLMHLTGEKIPKSCNIGDTVPAGAHNLEGSFDLKVLRIGAE CCCCEEECCHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCH STIAHIINLVIQAQSAKPKLQQRLDRYSSTYALTIFAISASIAIGGSLFTTLPFLGPDSA HHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEEEEEEHHHHCCCHHHHHCCCCCCCHH FYRALAFLIAASPCALIIAIPIAYLSTINACAKHGVLLKGGVVLDRLVSCNSVVMDKTGT HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHCCCCEEECCCCC LTTGDLTCCGCEDFGPESPLFYSYVLAMEQSSSHPIAQAIVNYLTEKQVLPLPATQCTTI EEECCEEEECCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCC PGEGVQGEFNGDQAFVGRVSTALRYVPEEYREQLRERAQQAQARGETCSIACSGQRVSLF CCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEE YFRDAPRHDAADIVAYLKKNGYPVCMLTGDHRISAENTAQLLGIDEVFYDLTPDNKLSKI EECCCCCCCHHHHHHHHHCCCCEEEEEECCCEECCCCHHHHEEHHHHHHCCCCCHHHHHH QELAKTRQIMMVGDGINDAPALAQATVGIAMGEAGSATAIEAADVVLLNQGLSSLPWLIK HHHHHHCEEEEEECCCCCCHHHHHHHHHEEECCCCCCCEEHHHHHHEECCCHHHHHHHHH KAKKTRRIVSQNLALALSIILFISGPASMGIIPLWLAVILHEGSTVIVGLNALRLLKNT HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8188605; 8188606 [H]