| Definition | Chlamydia muridarum Nigg, complete genome. |
|---|---|
| Accession | NC_002620 |
| Length | 1,072,950 |
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The map label for this gene is gpmA
Identifier: 15834720
GI number: 15834720
Start: 113634
End: 114314
Strand: Reverse
Name: gpmA
Synonym: TC0095
Alternate gene names: 15834720
Gene position: 114314-113634 (Counterclockwise)
Preceding gene: 15834724
Following gene: 15834719
Centisome position: 10.65
GC content: 39.35
Gene sequence:
>681_bases ATGACTCTTCTTATTCTGCTACGCCACGGTCAATCCGTATGGAATCAAAAAAATCTATTTACTGGATGGGTAGATATCCC TCTTAGTCAACAAGGAATTCAAGAAGCACTTACTGCTGGGGAAGCGATTAAAAATCTTCCTATTGATTGTATTTTTACCT CTACTCTAGTCAGAAGCTTGATGACAGCTCTTCTAGCAATGACTAACCACAGCTCTAAAAAAATTCCTTATATTATTCAT GAAGAACGCCCCGATATGAGTAGGATTCATAGTGAAAAAGAGTTGGAACAAATGATCCCCCTTTTTCAATCGAGCGCGCT TAATGAGCGTATGTATGGAGAACTTCAGGGGAAAAATAAACAAGAAGTTGCAGAGCAATTTGGAGAAGAGCAGGTTAGAC TCTGGCGTAGAAGCTACAAAATTGCTCCGCCACAAGGAGAAAGTCTCTTTGATACGGCGCAAAGAACTCTCCCTTACTTT CAAAAGCGCATTTTTCCTCTTATCCAACAGGGAAAAAATATTTTTATTTCTGCTCATGGGAACTCTTTACGCTCTTTGAT CATGGACCTAGAAAAATTAACTGAAGAAGAAGTACTCTCTTTAGAGTTGCCAACAGGGAAACCTATTGTATACGAATGGA CGGAACAAAAATTCACGAAGAGCGCACTTTCGTTTGGTTAA
Upstream 100 bases:
>100_bases TGCGCATCCCTACCTATAGACCTACAAGGTAAAAAAATCTTTGCAAAGATAATCCTTAAACGAGGAAGATAGGGCTTTCA CAACAATCGTCCTGCTTTTT
Downstream 100 bases:
>100_bases ATAATCAACAAACCATCCCGCCTTCTGAGATGGTTAAGGAAGCTTTTCAGCGTTATGCAAATGTGTTCTCCTGCGAAGTT AATACTTCTGCTCTTGCTTT
Product: phosphoglyceromutase
Products: NA
Alternate protein names: BPG-dependent PGAM; PGAM; Phosphoglyceromutase; dPGM
Number of amino acids: Translated: 226; Mature: 225
Protein sequence:
>226_residues MTLLILLRHGQSVWNQKNLFTGWVDIPLSQQGIQEALTAGEAIKNLPIDCIFTSTLVRSLMTALLAMTNHSSKKIPYIIH EERPDMSRIHSEKELEQMIPLFQSSALNERMYGELQGKNKQEVAEQFGEEQVRLWRRSYKIAPPQGESLFDTAQRTLPYF QKRIFPLIQQGKNIFISAHGNSLRSLIMDLEKLTEEEVLSLELPTGKPIVYEWTEQKFTKSALSFG
Sequences:
>Translated_226_residues MTLLILLRHGQSVWNQKNLFTGWVDIPLSQQGIQEALTAGEAIKNLPIDCIFTSTLVRSLMTALLAMTNHSSKKIPYIIH EERPDMSRIHSEKELEQMIPLFQSSALNERMYGELQGKNKQEVAEQFGEEQVRLWRRSYKIAPPQGESLFDTAQRTLPYF QKRIFPLIQQGKNIFISAHGNSLRSLIMDLEKLTEEEVLSLELPTGKPIVYEWTEQKFTKSALSFG >Mature_225_residues TLLILLRHGQSVWNQKNLFTGWVDIPLSQQGIQEALTAGEAIKNLPIDCIFTSTLVRSLMTALLAMTNHSSKKIPYIIHE ERPDMSRIHSEKELEQMIPLFQSSALNERMYGELQGKNKQEVAEQFGEEQVRLWRRSYKIAPPQGESLFDTAQRTLPYFQ KRIFPLIQQGKNIFISAHGNSLRSLIMDLEKLTEEEVLSLELPTGKPIVYEWTEQKFTKSALSFG
Specific function: Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
COG id: COG0588
COG function: function code G; Phosphoglycerate mutase 1
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily
Homologues:
Organism=Homo sapiens, GI4502445, Length=243, Percent_Identity=37.4485596707819, Blast_Score=159, Evalue=2e-39, Organism=Homo sapiens, GI40353764, Length=243, Percent_Identity=37.4485596707819, Blast_Score=159, Evalue=2e-39, Organism=Homo sapiens, GI50593010, Length=240, Percent_Identity=36.6666666666667, Blast_Score=158, Evalue=4e-39, Organism=Homo sapiens, GI4505753, Length=242, Percent_Identity=37.603305785124, Blast_Score=152, Evalue=2e-37, Organism=Homo sapiens, GI71274132, Length=242, Percent_Identity=35.5371900826446, Blast_Score=139, Evalue=2e-33, Organism=Homo sapiens, GI310129614, Length=193, Percent_Identity=33.160621761658, Blast_Score=92, Evalue=4e-19, Organism=Escherichia coli, GI1786970, Length=244, Percent_Identity=36.8852459016393, Blast_Score=163, Evalue=7e-42, Organism=Saccharomyces cerevisiae, GI6322697, Length=243, Percent_Identity=38.2716049382716, Blast_Score=160, Evalue=2e-40, Organism=Saccharomyces cerevisiae, GI6320183, Length=268, Percent_Identity=27.2388059701493, Blast_Score=96, Evalue=5e-21, Organism=Saccharomyces cerevisiae, GI6324516, Length=268, Percent_Identity=25, Blast_Score=95, Evalue=8e-21, Organism=Drosophila melanogaster, GI24646216, Length=242, Percent_Identity=38.4297520661157, Blast_Score=165, Evalue=2e-41, Organism=Drosophila melanogaster, GI85725270, Length=245, Percent_Identity=37.9591836734694, Blast_Score=158, Evalue=4e-39, Organism=Drosophila melanogaster, GI85725272, Length=245, Percent_Identity=37.9591836734694, Blast_Score=158, Evalue=4e-39, Organism=Drosophila melanogaster, GI24650981, Length=245, Percent_Identity=37.9591836734694, Blast_Score=158, Evalue=4e-39, Organism=Drosophila melanogaster, GI28571815, Length=239, Percent_Identity=29.7071129707113, Blast_Score=110, Evalue=1e-24, Organism=Drosophila melanogaster, GI28571817, Length=239, Percent_Identity=29.7071129707113, Blast_Score=110, Evalue=1e-24, Organism=Drosophila melanogaster, GI24648979, Length=239, Percent_Identity=29.7071129707113, Blast_Score=110, Evalue=1e-24,
Paralogues:
None
Copy number: 960 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): GPMA_CHLMU (Q9PLK4)
Other databases:
- EMBL: AE002160 - PIR: D81741 - RefSeq: NP_296479.1 - ProteinModelPortal: Q9PLK4 - SMR: Q9PLK4 - GeneID: 1245625 - GenomeReviews: AE002160_GR - KEGG: cmu:TC0095 - TIGR: TC_0095 - HOGENOM: HBG658938 - OMA: IRTLWFV - PhylomeDB: Q9PLK4 - ProtClustDB: PRK01112 - BioCyc: CMUR243161:TC_0095-MONOMER - BRENDA: 5.4.2.1 - GO: GO:0006096 - HAMAP: MF_01039 - InterPro: IPR013078 - InterPro: IPR001345 - InterPro: IPR005952 - PANTHER: PTHR11931 - SMART: SM00855 - TIGRFAMs: TIGR01258
Pfam domain/function: PF00300 PGAM
EC number: =5.4.2.1
Molecular weight: Translated: 25964; Mature: 25833
Theoretical pI: Translated: 7.08; Mature: 7.08
Prosite motif: PS00175 PG_MUTASE
Important sites: ACT_SITE 9-9 ACT_SITE 179-179
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLLILLRHGQSVWNQKNLFTGWVDIPLSQQGIQEALTAGEAIKNLPIDCIFTSTLVRSL CEEEEEEECCCHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH MTALLAMTNHSSKKIPYIIHEERPDMSRIHSEKELEQMIPLFQSSALNERMYGELQGKNK HHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH QEVAEQFGEEQVRLWRRSYKIAPPQGESLFDTAQRTLPYFQKRIFPLIQQGKNIFISAHG HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECC NSLRSLIMDLEKLTEEEVLSLELPTGKPIVYEWTEQKFTKSALSFG HHHHHHHHHHHHHCHHHHEEEECCCCCCEEEECHHHHHHHHHHCCC >Mature Secondary Structure TLLILLRHGQSVWNQKNLFTGWVDIPLSQQGIQEALTAGEAIKNLPIDCIFTSTLVRSL EEEEEEECCCHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH MTALLAMTNHSSKKIPYIIHEERPDMSRIHSEKELEQMIPLFQSSALNERMYGELQGKNK HHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH QEVAEQFGEEQVRLWRRSYKIAPPQGESLFDTAQRTLPYFQKRIFPLIQQGKNIFISAHG HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECC NSLRSLIMDLEKLTEEEVLSLELPTGKPIVYEWTEQKFTKSALSFG HHHHHHHHHHHHHCHHHHEEEECCCCCCEEEECHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10684935