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Identifier: 15834718

GI number: 15834718

Start: 111746

End: 112528

Strand: Reverse

Name: Not Available

Synonym: TC0093

Alternate gene names: NA

Gene position: 112528-111746 (Counterclockwise)

Preceding gene: 15834719

Following gene: 15834717

Centisome position: 10.49

GC content: 41.89

Gene sequence:

>783_bases
ATGATCATTCCATTTTATCCTTTCTCTTTATGGAGCAGCTTCCCCGCAAAATCATTGCGCTTATTCTTTCAGCCTAAACA
CGGGGGACTCTTATCTCAGGAGCAAGAAGATGAACACTCCCAACTTATCATAGGCAAGCAGGGTCACTTACTTATGGGGA
ATACCCTGATTTTTTACTGGCTTGTCAACAAAACAAATGGGATCATTCAAGAAGCTAAATTTCAATTCTTCGGCCATCCC
TATCTACTTGTTCTTGCTGAAGCCACCTGTTCATTAGTGATTGGAAAGACTTTTGCCGAAGCCTACAAAATGACTATAAA
TGACCTTGAGCAGGAAGTCCACGGACGTACCCAGCCCTCTATTTTCCGTGAAGACCTATCCCCCCTTTACCACTTGGTGA
TGGATGCTCTTGATATTGCGATTGAACAATGTGTCGATATTCCCGTAAATGACAGCCCTTTCCCCTTCAAAGATGCCCTC
CTACAATTAAACGATGGGGATCCCTATTCTAAAGAAGAGTGGGAGAATCTTTCCTACGATGAACAACTTTCTACATTAAA
CATCATGATGAAAGAAAAGATAGCTCCCCTGGTTGCTATGGATGAAGGCTCTGTACGTATCGTTCATTTCGAAGGACTTA
CTGTAACTATTGCCTACTCTGGAAATTGCTCCTCCTGCTTATCTGCTGTAGGATCCACCCTAAATTCAATAGGGCAGCTC
TTCCGAGCACACGTTTACCCTTTATTAGAAATAAAAGTAGATGAACAGTCTCTTTTATTTTAA

Upstream 100 bases:

>100_bases
TGTCTTTTACAGAACGTACTCCCGCTACACACTTCTCTGCTTTAGCCTCAGCCTTACAAGAAGGCATCTCGCATTTACAA
CCTCTCATCACCAAATCCCT

Downstream 100 bases:

>100_bases
TCCCTTTAACCCCCTAAAAAACAATTTTTAGACAATATATTGTTTTTAATGACGCCCTTTTGTTACAGAAGACAAAAGGG
CTCTTTTAACATAAAAGCCC

Product: NifU-related protein

Products: NA

Alternate protein names: Iron-Sulfur Cluster Assembly Protein NifU; Nitrogen Fixation Related Protein NifU; NifU Protein; NifU-Like Protein

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MIIPFYPFSLWSSFPAKSLRLFFQPKHGGLLSQEQEDEHSQLIIGKQGHLLMGNTLIFYWLVNKTNGIIQEAKFQFFGHP
YLLVLAEATCSLVIGKTFAEAYKMTINDLEQEVHGRTQPSIFREDLSPLYHLVMDALDIAIEQCVDIPVNDSPFPFKDAL
LQLNDGDPYSKEEWENLSYDEQLSTLNIMMKEKIAPLVAMDEGSVRIVHFEGLTVTIAYSGNCSSCLSAVGSTLNSIGQL
FRAHVYPLLEIKVDEQSLLF

Sequences:

>Translated_260_residues
MIIPFYPFSLWSSFPAKSLRLFFQPKHGGLLSQEQEDEHSQLIIGKQGHLLMGNTLIFYWLVNKTNGIIQEAKFQFFGHP
YLLVLAEATCSLVIGKTFAEAYKMTINDLEQEVHGRTQPSIFREDLSPLYHLVMDALDIAIEQCVDIPVNDSPFPFKDAL
LQLNDGDPYSKEEWENLSYDEQLSTLNIMMKEKIAPLVAMDEGSVRIVHFEGLTVTIAYSGNCSSCLSAVGSTLNSIGQL
FRAHVYPLLEIKVDEQSLLF
>Mature_260_residues
MIIPFYPFSLWSSFPAKSLRLFFQPKHGGLLSQEQEDEHSQLIIGKQGHLLMGNTLIFYWLVNKTNGIIQEAKFQFFGHP
YLLVLAEATCSLVIGKTFAEAYKMTINDLEQEVHGRTQPSIFREDLSPLYHLVMDALDIAIEQCVDIPVNDSPFPFKDAL
LQLNDGDPYSKEEWENLSYDEQLSTLNIMMKEKIAPLVAMDEGSVRIVHFEGLTVTIAYSGNCSSCLSAVGSTLNSIGQL
FRAHVYPLLEIKVDEQSLLF

Specific function: Unknown

COG id: COG0822

COG function: function code C; NifU homolog involved in Fe-S cluster formation

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29370; Mature: 29370

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIPFYPFSLWSSFPAKSLRLFFQPKHGGLLSQEQEDEHSQLIIGKQGHLLMGNTLIFYW
CEECCCCHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEECCCCEEECCEEEEEE
LVNKTNGIIQEAKFQFFGHPYLLVLAEATCSLVIGKTFAEAYKMTINDLEQEVHGRTQPS
EEECCCCHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
IFREDLSPLYHLVMDALDIAIEQCVDIPVNDSPFPFKDALLQLNDGDPYSKEEWENLSYD
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHEEEECCCCCCCHHHHCCCCHH
EQLSTLNIMMKEKIAPLVAMDEGSVRIVHFEGLTVTIAYSGNCSSCLSAVGSTLNSIGQL
HHHHHHHHHHHHHCCCEEEECCCCEEEEEECCEEEEEEECCCHHHHHHHHHHHHHHHHHH
FRAHVYPLLEIKVDEQSLLF
HHHHCCEEEEEEECHHHHCC
>Mature Secondary Structure
MIIPFYPFSLWSSFPAKSLRLFFQPKHGGLLSQEQEDEHSQLIIGKQGHLLMGNTLIFYW
CEECCCCHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEECCCCEEECCEEEEEE
LVNKTNGIIQEAKFQFFGHPYLLVLAEATCSLVIGKTFAEAYKMTINDLEQEVHGRTQPS
EEECCCCHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
IFREDLSPLYHLVMDALDIAIEQCVDIPVNDSPFPFKDALLQLNDGDPYSKEEWENLSYD
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHEEEECCCCCCCHHHHCCCCHH
EQLSTLNIMMKEKIAPLVAMDEGSVRIVHFEGLTVTIAYSGNCSSCLSAVGSTLNSIGQL
HHHHHHHHHHHHHCCCEEEECCCCEEEEEECCEEEEEEECCCHHHHHHHHHHHHHHHHHH
FRAHVYPLLEIKVDEQSLLF
HHHHCCEEEEEEECHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA