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Identifier: 15834715

GI number: 15834715

Start: 108587

End: 109891

Strand: Reverse

Name: Not Available

Synonym: TC0090

Alternate gene names: 15834715

Gene position: 109891-108587 (Counterclockwise)

Preceding gene: 15834716

Following gene: 15834714

Centisome position: 10.24

GC content: 43.14

Gene sequence:

>1305_bases
ATGATTCATCTTCAACAAGAAACTTTATTGATCCATCAATGGCGTCCTTATCGAGAGTGTGGGATTTTATCACGCATATC
AGGGGATCTTCTGGAAGCTCAAGGACTATCTGCATGCTTGGGAGAGCTCTGTCAAATTTCTCTCCCCCGCTCTTCCCCTA
TTCTTGCAGAAGTTATTGGCATTCATAATCAAACAACACTATTACTAGCACTTACTCCGATTTACTCTCTCTCTCTTGGA
GCAGAAGTTGTTCCCTTACGTAGACCAGCTTCGCTCCCTCTTTCCCACCACCTTCTTGGAAGAGTCATTGATGGATTCGG
TAACCCTCTGGATGGGAATCCTCCCCTACCTAAATCTCATCTCTCTCCGCTATTCTCCCCCCCTCCTTCTCCTATGTCGC
GCACCCCTATACAAGAAATATTCCCTACAGGAATCCGAGCGATTGACGCTCTACTCACCATAGGGGAAGGACAACGCGTA
GGAATCTTTTCAGAACCTGGCGGAGGTAAATCCTCTCTCTTATCTACGATAGCAAAGGGTTCTCAACAAACCATTAATGT
GATTGCTCTTATAGGAGAACGTGGCAGAGAAGTCCGAGATTATGTCAACCAACACAAAGAAGGCCTAGCAGCTCAACGTA
CAATTATTGTTGTTTCCACTGCCCATGAAACAGCCGCTAGCAAAGTCATTGCAGGTCGGGCTGCTATAACCATTGCAGAA
TATTTCCGGGATCAAGGAGCCCGGGTATTATTTATTATGGATTCTTTATCTAGGTGGATAGAGTCTCTTCAAGAGGTAGC
TCTTGCTAGAGGAGAAACACTTTCTACACATCATTACGCAGCATCAGTTTTTCACCATGTTTCAGAATTCTTAGAGCGAG
CAGGGAACAATGATAAAGGATCTATCACATCTTTTTATGCTATGTTGCATTATGCAAACCACCCCGACATTTTTAATGAT
TATGTTAAATCTCTTCTAGATGGACATTTCTTCCTCTCCCCTGTGGAAAAAAGCTTCTTTTCTCCTCCTATTAATCTGTT
AACGAGTCTTTCTAGATCAGCTTGTCAACTAGCGCTTCCTCACCACTATGCCGCTGCTCAAGAACTCCTTTCTCTGCTAA
AAGCTTACCATGAAGCTATTGATATCATTCAGTTAGGAGCATATGTCTCCGGACAGGATGCTAAACTTGATCGAGCGATT
CGCCTTCTTCCATCATTACGAGAATTTTTATCCCAACCTCTTTCTAACTACTCTGATATTCACGACACAATCGAACAACT
CTGCTTGTTGTTAAAACATGAATAA

Upstream 100 bases:

>100_bases
GGGAAGAACTTTCGCATCTTTTGAGCGTTCTCACTCCATAACAAACAGATACCTTATACAAGCGCTCTATACTAAGAAGA
AAGCTTAACCAACACATTGT

Downstream 100 bases:

>100_bases
AAAACTCCAAGATTTATCTACCCTCCTTAAAATCTCTCTGTTCAAAAAGCGCGTTCTTCTGGACACGTTAAAAAAGGAGC
TCTCGAATATCGATAATCGC

Product: type III secretion system ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 434; Mature: 434

Protein sequence:

>434_residues
MIHLQQETLLIHQWRPYRECGILSRISGDLLEAQGLSACLGELCQISLPRSSPILAEVIGIHNQTTLLLALTPIYSLSLG
AEVVPLRRPASLPLSHHLLGRVIDGFGNPLDGNPPLPKSHLSPLFSPPPSPMSRTPIQEIFPTGIRAIDALLTIGEGQRV
GIFSEPGGGKSSLLSTIAKGSQQTINVIALIGERGREVRDYVNQHKEGLAAQRTIIVVSTAHETAASKVIAGRAAITIAE
YFRDQGARVLFIMDSLSRWIESLQEVALARGETLSTHHYAASVFHHVSEFLERAGNNDKGSITSFYAMLHYANHPDIFND
YVKSLLDGHFFLSPVEKSFFSPPINLLTSLSRSACQLALPHHYAAAQELLSLLKAYHEAIDIIQLGAYVSGQDAKLDRAI
RLLPSLREFLSQPLSNYSDIHDTIEQLCLLLKHE

Sequences:

>Translated_434_residues
MIHLQQETLLIHQWRPYRECGILSRISGDLLEAQGLSACLGELCQISLPRSSPILAEVIGIHNQTTLLLALTPIYSLSLG
AEVVPLRRPASLPLSHHLLGRVIDGFGNPLDGNPPLPKSHLSPLFSPPPSPMSRTPIQEIFPTGIRAIDALLTIGEGQRV
GIFSEPGGGKSSLLSTIAKGSQQTINVIALIGERGREVRDYVNQHKEGLAAQRTIIVVSTAHETAASKVIAGRAAITIAE
YFRDQGARVLFIMDSLSRWIESLQEVALARGETLSTHHYAASVFHHVSEFLERAGNNDKGSITSFYAMLHYANHPDIFND
YVKSLLDGHFFLSPVEKSFFSPPINLLTSLSRSACQLALPHHYAAAQELLSLLKAYHEAIDIIQLGAYVSGQDAKLDRAI
RLLPSLREFLSQPLSNYSDIHDTIEQLCLLLKHE
>Mature_434_residues
MIHLQQETLLIHQWRPYRECGILSRISGDLLEAQGLSACLGELCQISLPRSSPILAEVIGIHNQTTLLLALTPIYSLSLG
AEVVPLRRPASLPLSHHLLGRVIDGFGNPLDGNPPLPKSHLSPLFSPPPSPMSRTPIQEIFPTGIRAIDALLTIGEGQRV
GIFSEPGGGKSSLLSTIAKGSQQTINVIALIGERGREVRDYVNQHKEGLAAQRTIIVVSTAHETAASKVIAGRAAITIAE
YFRDQGARVLFIMDSLSRWIESLQEVALARGETLSTHHYAASVFHHVSEFLERAGNNDKGSITSFYAMLHYANHPDIFND
YVKSLLDGHFFLSPVEKSFFSPPINLLTSLSRSACQLALPHHYAAAQELLSLLKAYHEAIDIIQLGAYVSGQDAKLDRAI
RLLPSLREFLSQPLSNYSDIHDTIEQLCLLLKHE

Specific function: Probable catalytic subunit of a protein translocase for flagellum-specific export, or a proton translocase involved in local circuits at the flagellum [H]

COG id: COG1157

COG function: function code NU; Flagellar biosynthesis/type III secretory pathway ATPase

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase alpha/beta chains family [H]

Homologues:

Organism=Homo sapiens, GI50345984, Length=346, Percent_Identity=29.4797687861272, Blast_Score=114, Evalue=2e-25,
Organism=Homo sapiens, GI4757810, Length=346, Percent_Identity=29.4797687861272, Blast_Score=114, Evalue=2e-25,
Organism=Homo sapiens, GI32189394, Length=367, Percent_Identity=27.7929155313352, Blast_Score=113, Evalue=4e-25,
Organism=Homo sapiens, GI19913428, Length=282, Percent_Identity=27.6595744680851, Blast_Score=97, Evalue=2e-20,
Organism=Homo sapiens, GI19913426, Length=282, Percent_Identity=27.3049645390071, Blast_Score=91, Evalue=2e-18,
Organism=Homo sapiens, GI19913424, Length=176, Percent_Identity=31.25, Blast_Score=78, Evalue=1e-14,
Organism=Escherichia coli, GI1788251, Length=424, Percent_Identity=37.0283018867925, Blast_Score=249, Evalue=2e-67,
Organism=Escherichia coli, GI1790172, Length=355, Percent_Identity=28.4507042253521, Blast_Score=121, Evalue=8e-29,
Organism=Escherichia coli, GI1790170, Length=386, Percent_Identity=26.6839378238342, Blast_Score=110, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI71988080, Length=347, Percent_Identity=28.2420749279539, Blast_Score=114, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI71988063, Length=348, Percent_Identity=28.735632183908, Blast_Score=114, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI25144756, Length=393, Percent_Identity=26.4631043256997, Blast_Score=110, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI17510931, Length=280, Percent_Identity=28.2142857142857, Blast_Score=105, Evalue=6e-23,
Organism=Caenorhabditis elegans, GI17570191, Length=334, Percent_Identity=25.4491017964072, Blast_Score=100, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI71988074, Length=333, Percent_Identity=27.9279279279279, Blast_Score=98, Evalue=7e-21,
Organism=Caenorhabditis elegans, GI17565854, Length=161, Percent_Identity=32.9192546583851, Blast_Score=80, Evalue=3e-15,
Organism=Saccharomyces cerevisiae, GI6322581, Length=404, Percent_Identity=27.2277227722772, Blast_Score=117, Evalue=4e-27,
Organism=Saccharomyces cerevisiae, GI6319370, Length=351, Percent_Identity=29.0598290598291, Blast_Score=110, Evalue=6e-25,
Organism=Saccharomyces cerevisiae, GI6319603, Length=334, Percent_Identity=26.0479041916168, Blast_Score=106, Evalue=7e-24,
Organism=Saccharomyces cerevisiae, GI6320016, Length=119, Percent_Identity=33.6134453781513, Blast_Score=66, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24638766, Length=391, Percent_Identity=27.1099744245524, Blast_Score=112, Evalue=5e-25,
Organism=Drosophila melanogaster, GI24658560, Length=346, Percent_Identity=28.0346820809249, Blast_Score=106, Evalue=3e-23,
Organism=Drosophila melanogaster, GI281361666, Length=283, Percent_Identity=27.9151943462898, Blast_Score=99, Evalue=4e-21,
Organism=Drosophila melanogaster, GI24646341, Length=283, Percent_Identity=27.9151943462898, Blast_Score=99, Evalue=4e-21,
Organism=Drosophila melanogaster, GI17136796, Length=283, Percent_Identity=27.9151943462898, Blast_Score=99, Evalue=4e-21,
Organism=Drosophila melanogaster, GI28574560, Length=369, Percent_Identity=27.10027100271, Blast_Score=96, Evalue=5e-20,
Organism=Drosophila melanogaster, GI20129479, Length=182, Percent_Identity=30.7692307692308, Blast_Score=79, Evalue=7e-15,
Organism=Drosophila melanogaster, GI24583988, Length=175, Percent_Identity=30.2857142857143, Blast_Score=76, Evalue=5e-14,
Organism=Drosophila melanogaster, GI24583986, Length=175, Percent_Identity=30.2857142857143, Blast_Score=76, Evalue=5e-14,
Organism=Drosophila melanogaster, GI24583984, Length=175, Percent_Identity=30.2857142857143, Blast_Score=76, Evalue=5e-14,
Organism=Drosophila melanogaster, GI24583992, Length=175, Percent_Identity=29.7142857142857, Blast_Score=76, Evalue=6e-14,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000225
- InterPro:   IPR020003
- InterPro:   IPR000194
- InterPro:   IPR003593
- InterPro:   IPR004100
- InterPro:   IPR005714
- InterPro:   IPR022425 [H]

Pfam domain/function: PF00006 ATP-synt_ab; PF02874 ATP-synt_ab_N [H]

EC number: =3.6.3.14 [H]

Molecular weight: Translated: 47633; Mature: 47633

Theoretical pI: Translated: 6.86; Mature: 6.86

Prosite motif: PS00152 ATPASE_ALPHA_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIHLQQETLLIHQWRPYRECGILSRISGDLLEAQGLSACLGELCQISLPRSSPILAEVIG
CCEECCHHHHHCCCCCHHHHHHHHHHCCHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHC
IHNQTTLLLALTPIYSLSLGAEVVPLRRPASLPLSHHLLGRVIDGFGNPLDGNPPLPKSH
CCCCCEEEEEEHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHH
LSPLFSPPPSPMSRTPIQEIFPTGIRAIDALLTIGEGQRVGIFSEPGGGKSSLLSTIAKG
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHCC
SQQTINVIALIGERGREVRDYVNQHKEGLAAQRTIIVVSTAHETAASKVIAGRAAITIAE
CCHHHHHHEEECCCCHHHHHHHHHHHHCHHHCEEEEEEECCHHHHHHHHHHHHHHHHHHH
YFRDQGARVLFIMDSLSRWIESLQEVALARGETLSTHHYAASVFHHVSEFLERAGNNDKG
HHHCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
SITSFYAMLHYANHPDIFNDYVKSLLDGHFFLSPVEKSFFSPPINLLTSLSRSACQLALP
HHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEECHHHHHHCCCCHHHHHHHHHHHHHHHCC
HHYAAAQELLSLLKAYHEAIDIIQLGAYVSGQDAKLDRAIRLLPSLREFLSQPLSNYSDI
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
HDTIEQLCLLLKHE
HHHHHHHHHHHCCC
>Mature Secondary Structure
MIHLQQETLLIHQWRPYRECGILSRISGDLLEAQGLSACLGELCQISLPRSSPILAEVIG
CCEECCHHHHHCCCCCHHHHHHHHHHCCHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHC
IHNQTTLLLALTPIYSLSLGAEVVPLRRPASLPLSHHLLGRVIDGFGNPLDGNPPLPKSH
CCCCCEEEEEEHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHH
LSPLFSPPPSPMSRTPIQEIFPTGIRAIDALLTIGEGQRVGIFSEPGGGKSSLLSTIAKG
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHCC
SQQTINVIALIGERGREVRDYVNQHKEGLAAQRTIIVVSTAHETAASKVIAGRAAITIAE
CCHHHHHHEEECCCCHHHHHHHHHHHHCHHHCEEEEEEECCHHHHHHHHHHHHHHHHHHH
YFRDQGARVLFIMDSLSRWIESLQEVALARGETLSTHHYAASVFHHVSEFLERAGNNDKG
HHHCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
SITSFYAMLHYANHPDIFNDYVKSLLDGHFFLSPVEKSFFSPPINLLTSLSRSACQLALP
HHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEECHHHHHHCCCCHHHHHHHHHHHHHHHCC
HHYAAAQELLSLLKAYHEAIDIIQLGAYVSGQDAKLDRAIRLLPSLREFLSQPLSNYSDI
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
HDTIEQLCLLLKHE
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1828465; 9384377 [H]