| Definition | Chlamydia muridarum Nigg, complete genome. |
|---|---|
| Accession | NC_002620 |
| Length | 1,072,950 |
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Identifier: 15834709
GI number: 15834709
Start: 101121
End: 103430
Strand: Direct
Name: Not Available
Synonym: TC0084
Alternate gene names: NA
Gene position: 101121-103430 (Clockwise)
Preceding gene: 15834708
Following gene: 15834710
Centisome position: 9.42
GC content: 39.0
Gene sequence:
>2310_bases GTGTCAATACAACCAAAGTCCGTTTCTTTTACTAAGAATTTAGTAGCACCTTGGGCCGGAGAGCAGGTTGATTCTGCCGC GATGTATACATCGCAGGCTGTTTTTTTCTTTCAGCAATTGGACGAAAAAAGCAAAGCCCTAAAGCGGGCTTTAGGATTGC TTGAAGAACTTGATGTCGAAAAGTTTACTCCATCGCTAGAAGAAACTCCCACGATAATACAGCCGGAAATAACGGGAAGA ATTTCCTATGATGATATCGAGATTATAGAGTCTCTTACCCCTGATATAATTTTAGCGGATCCTGATAGGGCTTCTGCTCA GGTTTTTGGGGAAGGGCTTGCGGATAGTTTTGATGACTGGCTAACATTATCGGAAAATGGAGGGCTTCAGGATCCTACTC CAGTAGAACAGGAAATAGTGACTAGGTATCAAACGGAGCTGAATGCTTTACGTAATAAACTCAAACAATCTGTATTAACG CCCGATGAATATGCGAGACTGTATGCAATCCCTCAAACTTTTGTAAAAGAGATAGAAAGCATAAAGGATGAAAATAATGT TAGGCTGATTCCCAAGAGTAAGGTAACGAACTTTTGGCAAAATATTATGCTGACCTACACGTCAGTGACATCGTTATCGG AGCCTGTTTCCGATGCAATGAATACCTCCATAGCAGACTATTCTCTTTATATCGAAAGAGCTACGCAAGCTGCTAGTTTA ATTCGAGAGATTACTAACCTTATCAAAGATATCTTCAATCCTATTTGGGATTTAAGCACCCAAATAATAACGAATGCCTT CTCTTTAAATGGAGCAGAGTTTAACTCATTAGAAGGAGGGATCATTCAAAGCTTATTAAGCTTTGCGGGGCTTTTTCGAC AGTTAATGAGCCGTACTTCAACTGTTGATGAGATTGGTGATCTCTATCCTCAAAACGTCCAAAACCAAGATGTTATTCAT ACAGCTATCGATGAGTATGTAAATTCTCTTACTAATTTAAAAGTTAACGATCATGTGCAACTCAATGGGCTTCTAAGCTT GGTTTATGCGTATGGAGCAAGTACTTTAGTTTTTACTCAAAAGTCTATATCCAATAGTAATCAGATCTCTTTAACAGAGT ATAGCGCTGCTTTAGAAAAAGAAATTCAGTATTGGGTTCCTAGAGAAACTGCGAATTTCAAAATTTCTGATCAAGCATTA ACAACTTTTAAAGACAAACCTTCAGGGACTTATAACGGGGTTGCCCTTTTCGATTTTAATGGTTCAGCGGTCAACATTTT CAATCCTACATTCTTCTTCGACGTAGTTAGTCTTATGACTACAGATCCTAAGAAAGCAATGACAAGAGAAGACTACAATA GGGTGATTGCTGCTTCAGAATCGAGTATTAGGAAAATCAATGAATCCATTGCTGCATGGGAAGCTGCTATTGCAGAATGT AATGCAAAAAAAGTACAGATGGATCCTGCAGGGCGCAACTATTTTGATGCTATGGTTTTAGCGAAGCAGACTTTCGTGAA CACTTCTCCAATACAGATGGTGTATGCGTCATTGATGTTGGATAAGTATCTTCCCAATCAGCAGTACATACTGGAAACAT TGGGAAGTCAGATGACTTTCTCCAATAAAGCCGCTCGGTATTTAAATGATATTATTGCTCACTCAGTAAGTTTTCAAACA GCAGACGTGTATTATGCTTTGGGGATGTATCTTCGGCAGATGAACGTTCAAGCATTTCCTGAGTCAATTTCTCGAGCTAA AAATCTTTTAAACAAAGAGATAGAGCGATGTCGTGCGGATCTATTTCACTGTCAAAGAGCTATAGAAGAGATCAACAAGC TATCTGCAAGTGTAAAAGCAGATACTGAATTGACTTCATCCCAACGATCAGAGTTATTAGAAACTTTAGCTAGTTATGCT TTTGAATTTAACAACCTTTATCACAATCTCTCTAATGTTTATGCCATGGCTTCCGTCATACAGATTTCGGGTGTAGATAA ACCTGATGAAGTGGATAAAGCCTTCACTACGACTATTGGAACAAAAGATTTAGATACCTGGATTCAACAATTCACTATTT TTGAAAGTGCAGTTATTGAAGGAGGGCGTGGTGGAGTGATGCCTGGAGGAGAGCGACAGGTATTGCAAAGTCTAGAGAGT AAGCAGCAAGATTACACTTCTTTTAACCAGAATCAACAATTGGCTTTACAAATGGAGTCTGCTGCTATTCAGCAGGAGTG GACGATGGTAGCAGCAGCTTTAGCGTTGATGAATCAAATCTTCGCGAAGTTAATCCGTAGATTTAAATAA
Upstream 100 bases:
>100_bases ACGAGTTTTAATTATTTCAATTTAGAAATTATTGTTTTTCTGTTTTAAAAAACAATTTTTATTTTTAAAATTAGAAAAAT AATAGTTTCTGGATAGTCTC
Downstream 100 bases:
>100_bases AATCGTTTTGGGGGGCAAAAAAACGATTATGAAAAACCAACCGATTCAAGCAAGACAGAAATATTTTGTTCCAATGACAG AAACTGCCGCTCCTAGAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 769; Mature: 768
Protein sequence:
>769_residues MSIQPKSVSFTKNLVAPWAGEQVDSAAMYTSQAVFFFQQLDEKSKALKRALGLLEELDVEKFTPSLEETPTIIQPEITGR ISYDDIEIIESLTPDIILADPDRASAQVFGEGLADSFDDWLTLSENGGLQDPTPVEQEIVTRYQTELNALRNKLKQSVLT PDEYARLYAIPQTFVKEIESIKDENNVRLIPKSKVTNFWQNIMLTYTSVTSLSEPVSDAMNTSIADYSLYIERATQAASL IREITNLIKDIFNPIWDLSTQIITNAFSLNGAEFNSLEGGIIQSLLSFAGLFRQLMSRTSTVDEIGDLYPQNVQNQDVIH TAIDEYVNSLTNLKVNDHVQLNGLLSLVYAYGASTLVFTQKSISNSNQISLTEYSAALEKEIQYWVPRETANFKISDQAL TTFKDKPSGTYNGVALFDFNGSAVNIFNPTFFFDVVSLMTTDPKKAMTREDYNRVIAASESSIRKINESIAAWEAAIAEC NAKKVQMDPAGRNYFDAMVLAKQTFVNTSPIQMVYASLMLDKYLPNQQYILETLGSQMTFSNKAARYLNDIIAHSVSFQT ADVYYALGMYLRQMNVQAFPESISRAKNLLNKEIERCRADLFHCQRAIEEINKLSASVKADTELTSSQRSELLETLASYA FEFNNLYHNLSNVYAMASVIQISGVDKPDEVDKAFTTTIGTKDLDTWIQQFTIFESAVIEGGRGGVMPGGERQVLQSLES KQQDYTSFNQNQQLALQMESAAIQQEWTMVAAALALMNQIFAKLIRRFK
Sequences:
>Translated_769_residues MSIQPKSVSFTKNLVAPWAGEQVDSAAMYTSQAVFFFQQLDEKSKALKRALGLLEELDVEKFTPSLEETPTIIQPEITGR ISYDDIEIIESLTPDIILADPDRASAQVFGEGLADSFDDWLTLSENGGLQDPTPVEQEIVTRYQTELNALRNKLKQSVLT PDEYARLYAIPQTFVKEIESIKDENNVRLIPKSKVTNFWQNIMLTYTSVTSLSEPVSDAMNTSIADYSLYIERATQAASL IREITNLIKDIFNPIWDLSTQIITNAFSLNGAEFNSLEGGIIQSLLSFAGLFRQLMSRTSTVDEIGDLYPQNVQNQDVIH TAIDEYVNSLTNLKVNDHVQLNGLLSLVYAYGASTLVFTQKSISNSNQISLTEYSAALEKEIQYWVPRETANFKISDQAL TTFKDKPSGTYNGVALFDFNGSAVNIFNPTFFFDVVSLMTTDPKKAMTREDYNRVIAASESSIRKINESIAAWEAAIAEC NAKKVQMDPAGRNYFDAMVLAKQTFVNTSPIQMVYASLMLDKYLPNQQYILETLGSQMTFSNKAARYLNDIIAHSVSFQT ADVYYALGMYLRQMNVQAFPESISRAKNLLNKEIERCRADLFHCQRAIEEINKLSASVKADTELTSSQRSELLETLASYA FEFNNLYHNLSNVYAMASVIQISGVDKPDEVDKAFTTTIGTKDLDTWIQQFTIFESAVIEGGRGGVMPGGERQVLQSLES KQQDYTSFNQNQQLALQMESAAIQQEWTMVAAALALMNQIFAKLIRRFK >Mature_768_residues SIQPKSVSFTKNLVAPWAGEQVDSAAMYTSQAVFFFQQLDEKSKALKRALGLLEELDVEKFTPSLEETPTIIQPEITGRI SYDDIEIIESLTPDIILADPDRASAQVFGEGLADSFDDWLTLSENGGLQDPTPVEQEIVTRYQTELNALRNKLKQSVLTP DEYARLYAIPQTFVKEIESIKDENNVRLIPKSKVTNFWQNIMLTYTSVTSLSEPVSDAMNTSIADYSLYIERATQAASLI REITNLIKDIFNPIWDLSTQIITNAFSLNGAEFNSLEGGIIQSLLSFAGLFRQLMSRTSTVDEIGDLYPQNVQNQDVIHT AIDEYVNSLTNLKVNDHVQLNGLLSLVYAYGASTLVFTQKSISNSNQISLTEYSAALEKEIQYWVPRETANFKISDQALT TFKDKPSGTYNGVALFDFNGSAVNIFNPTFFFDVVSLMTTDPKKAMTREDYNRVIAASESSIRKINESIAAWEAAIAECN AKKVQMDPAGRNYFDAMVLAKQTFVNTSPIQMVYASLMLDKYLPNQQYILETLGSQMTFSNKAARYLNDIIAHSVSFQTA DVYYALGMYLRQMNVQAFPESISRAKNLLNKEIERCRADLFHCQRAIEEINKLSASVKADTELTSSQRSELLETLASYAF EFNNLYHNLSNVYAMASVIQISGVDKPDEVDKAFTTTIGTKDLDTWIQQFTIFESAVIEGGRGGVMPGGERQVLQSLESK QQDYTSFNQNQQLALQMESAAIQQEWTMVAAALALMNQIFAKLIRRFK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 86255; Mature: 86124
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIQPKSVSFTKNLVAPWAGEQVDSAAMYTSQAVFFFQQLDEKSKALKRALGLLEELDVE CCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH KFTPSLEETPTIIQPEITGRISYDDIEIIESLTPDIILADPDRASAQVFGEGLADSFDDW HCCCCCCCCCCEECCCCCCCCCCHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHCCHHHC LTLSENGGLQDPTPVEQEIVTRYQTELNALRNKLKQSVLTPDEYARLYAIPQTFVKEIES EEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHH IKDENNVRLIPKSKVTNFWQNIMLTYTSVTSLSEPVSDAMNTSIADYSLYIERATQAASL HCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH IREITNLIKDIFNPIWDLSTQIITNAFSLNGAEFNSLEGGIIQSLLSFAGLFRQLMSRTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC TVDEIGDLYPQNVQNQDVIHTAIDEYVNSLTNLKVNDHVQLNGLLSLVYAYGASTLVFTQ CHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCEEEEEH KSISNSNQISLTEYSAALEKEIQYWVPRETANFKISDQALTTFKDKPSGTYNGVALFDFN HHCCCCCCEEHHHHHHHHHHHHHHHCCCCCCCEEECHHHHHHHCCCCCCCCCCEEEEECC GSAVNIFNPTFFFDVVSLMTTDPKKAMTREDYNRVIAASESSIRKINESIAAWEAAIAEC CCEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHC NAKKVQMDPAGRNYFDAMVLAKQTFVNTSPIQMVYASLMLDKYLPNQQYILETLGSQMTF CCCEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHH SNKAARYLNDIIAHSVSFQTADVYYALGMYLRQMNVQAFPESISRAKNLLNKEIERCRAD HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFHCQRAIEEINKLSASVKADTELTSSQRSELLETLASYAFEFNNLYHNLSNVYAMASVI HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QISGVDKPDEVDKAFTTTIGTKDLDTWIQQFTIFESAVIEGGRGGVMPGGERQVLQSLES HHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH KQQDYTSFNQNQQLALQMESAAIQQEWTMVAAALALMNQIFAKLIRRFK HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SIQPKSVSFTKNLVAPWAGEQVDSAAMYTSQAVFFFQQLDEKSKALKRALGLLEELDVE CCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH KFTPSLEETPTIIQPEITGRISYDDIEIIESLTPDIILADPDRASAQVFGEGLADSFDDW HCCCCCCCCCCEECCCCCCCCCCHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHCCHHHC LTLSENGGLQDPTPVEQEIVTRYQTELNALRNKLKQSVLTPDEYARLYAIPQTFVKEIES EEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHH IKDENNVRLIPKSKVTNFWQNIMLTYTSVTSLSEPVSDAMNTSIADYSLYIERATQAASL HCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH IREITNLIKDIFNPIWDLSTQIITNAFSLNGAEFNSLEGGIIQSLLSFAGLFRQLMSRTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC TVDEIGDLYPQNVQNQDVIHTAIDEYVNSLTNLKVNDHVQLNGLLSLVYAYGASTLVFTQ CHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCEEEEEH KSISNSNQISLTEYSAALEKEIQYWVPRETANFKISDQALTTFKDKPSGTYNGVALFDFN HHCCCCCCEEHHHHHHHHHHHHHHHCCCCCCCEEECHHHHHHHCCCCCCCCCCEEEEECC GSAVNIFNPTFFFDVVSLMTTDPKKAMTREDYNRVIAASESSIRKINESIAAWEAAIAEC CCEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHC NAKKVQMDPAGRNYFDAMVLAKQTFVNTSPIQMVYASLMLDKYLPNQQYILETLGSQMTF CCCEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHH SNKAARYLNDIIAHSVSFQTADVYYALGMYLRQMNVQAFPESISRAKNLLNKEIERCRAD HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFHCQRAIEEINKLSASVKADTELTSSQRSELLETLASYAFEFNNLYHNLSNVYAMASVI HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QISGVDKPDEVDKAFTTTIGTKDLDTWIQQFTIFESAVIEGGRGGVMPGGERQVLQSLES HHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH KQQDYTSFNQNQQLALQMESAAIQQEWTMVAAALALMNQIFAKLIRRFK HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA