| Definition | Chlamydia muridarum Nigg, complete genome. |
|---|---|
| Accession | NC_002620 |
| Length | 1,072,950 |
Click here to switch to the map view.
The map label for this gene is Not Available
Identifier: 15834700
GI number: 15834700
Start: 87441
End: 87974
Strand: Reverse
Name: Not Available
Synonym: TC0075
Alternate gene names: NA
Gene position: 87974-87441 (Counterclockwise)
Preceding gene: 15834701
Following gene: 15834696
Centisome position: 8.2
GC content: 39.7
Gene sequence:
>534_bases ATGCACTACGAACTATACGATGAATCCCAATCTGATGATAAACAAGAGCTAGATTGTCTCATCTGTGAGTCAGATAAAAC AAAACCTTTAGATGCCTATCATGAAACGGGGGTATATATAGAGGAAGATGATCGAGAAAATGGCGACTTGCTCATTGTAC TAGGGGAATCAGTATTGAATGGCGTTACTCGTCAATTCTACATTAGTGATTGTAACTATGCCTATACTCGTAGCTATTAT CGAGGCTGTTGGGAAGGCTGGTTTAATATTCCTCCCAAAAAAATTACTACAGCCGAATACGACTGTAATACACTTCTTCA TCCAGATTTGCTAATTACTACAAATGTGGAGAAACTGCTCAATGCTCCTAAAGACTTTCCTGCACAAAACGCCAATTTAG ACAATATCATCATTTGCATGACTACCTTGAACAGGGCGCATCGGGTACAATTTTTAATCAGTGACAATCATCGCTCTTTC TGGATTCGCCACCATGACGGAGAAGCCTGGTCTGAATGGGCTACTTTTATATAA
Upstream 100 bases:
>100_bases AAAACCTGCGAGAAAATCAAATTAATTTGTAAAAAAATAAAAATCTTTTATTAGAAATAATAAAAAATAAAATAGTTATT TCTTGGAGATTTTAATCCCT
Downstream 100 bases:
>100_bases CCACAAAACCTTAATGCTTTCTAATTTTAGCATTCTCTCCAATACAGAAAAGGCAATCTCCCAATAAGAGAGATTGCCTA AAAGGCTAATTTTCCTCTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 177; Mature: 177
Protein sequence:
>177_residues MHYELYDESQSDDKQELDCLICESDKTKPLDAYHETGVYIEEDDRENGDLLIVLGESVLNGVTRQFYISDCNYAYTRSYY RGCWEGWFNIPPKKITTAEYDCNTLLHPDLLITTNVEKLLNAPKDFPAQNANLDNIIICMTTLNRAHRVQFLISDNHRSF WIRHHDGEAWSEWATFI
Sequences:
>Translated_177_residues MHYELYDESQSDDKQELDCLICESDKTKPLDAYHETGVYIEEDDRENGDLLIVLGESVLNGVTRQFYISDCNYAYTRSYY RGCWEGWFNIPPKKITTAEYDCNTLLHPDLLITTNVEKLLNAPKDFPAQNANLDNIIICMTTLNRAHRVQFLISDNHRSF WIRHHDGEAWSEWATFI >Mature_177_residues MHYELYDESQSDDKQELDCLICESDKTKPLDAYHETGVYIEEDDRENGDLLIVLGESVLNGVTRQFYISDCNYAYTRSYY RGCWEGWFNIPPKKITTAEYDCNTLLHPDLLITTNVEKLLNAPKDFPAQNANLDNIIICMTTLNRAHRVQFLISDNHRSF WIRHHDGEAWSEWATFI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20719; Mature: 20719
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHYELYDESQSDDKQELDCLICESDKTKPLDAYHETGVYIEEDDRENGDLLIVLGESVLN CCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHCCCEEECCCCCCCCEEEEECCHHHC GVTRQFYISDCNYAYTRSYYRGCWEGWFNIPPKKITTAEYDCNTLLHPDLLITTNVEKLL CCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCEEECCCCCCEECCCCEEEEECHHHHH NAPKDFPAQNANLDNIIICMTTLNRAHRVQFLISDNHRSFWIRHHDGEAWSEWATFI CCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEEECCCEEEEEEECCCCCHHHHHHCC >Mature Secondary Structure MHYELYDESQSDDKQELDCLICESDKTKPLDAYHETGVYIEEDDRENGDLLIVLGESVLN CCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHCCCEEECCCCCCCCEEEEECCHHHC GVTRQFYISDCNYAYTRSYYRGCWEGWFNIPPKKITTAEYDCNTLLHPDLLITTNVEKLL CCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCEEECCCCCCEECCCCEEEEECHHHHH NAPKDFPAQNANLDNIIICMTTLNRAHRVQFLISDNHRSFWIRHHDGEAWSEWATFI CCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEEECCCEEEEEEECCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA