Definition Chlamydia muridarum Nigg, complete genome.
Accession NC_002620
Length 1,072,950

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 15834649

GI number: 15834649

Start: 31049

End: 31537

Strand: Reverse

Name: Not Available

Synonym: TC0024

Alternate gene names: NA

Gene position: 31537-31049 (Counterclockwise)

Preceding gene: 15834650

Following gene: 15834648

Centisome position: 2.94

GC content: 39.67

Gene sequence:

>489_bases
ATGACAAAGTTTCTTTTTCACGGCATTTGGTGTACAGTCGTCCTAGTATTATGTGCTTGTATAACAGCGTTAGCTGTTGT
CAAAATGGGAAATTTCACGAATCCCACACTCGTACACCAAGACCCTTCAACTCCTCCTCCTCCGTTCTTAAAAATAAAAA
AACTAGGAGTCCGAAAACGCATTATTTCCCCAGAAAAGCAATTCTTTTACTGCACGATAGATAAATCTTGCATGGAACTT
CATATTTCCAATACAAGTTTGCATTGTCGAGAGCTTTTATCGCATTTAACAGGAAGTCTGCAGACTGAAACCGCAGAGCG
GGCTATGTTTTTTCGAGGAACAGGGGGTCTGCTTAATTACAAAGATTATTCTTTGAGCGTGTATAATTGTTGTTTTTCCA
TTAATAGCCCAGATTCCATAACTGAAACCGGTAAGGGGATTGCTGAAGGCGGAATGAAAGTCCTCTCTCTCTCTTTACTT
AAAGACTAA

Upstream 100 bases:

>100_bases
GTGATGCCGCTTCTATGCTCTCTTTGAAAGATCTAGAACGATTATTACCATCTTGGGTACAACTGTTCACATACATTCAA
GAGATGGACACCGTTTCTAT

Downstream 100 bases:

>100_bases
TTTCTTATGTCAGTACTGTCCGTTTGCAACCTAATCAAAAGATACAATAAAAAACCGGTTACTAACGATGTGTCCTTCCA
AGTGAATGCAGGAGAAATCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 162; Mature: 161

Protein sequence:

>162_residues
MTKFLFHGIWCTVVLVLCACITALAVVKMGNFTNPTLVHQDPSTPPPPFLKIKKLGVRKRIISPEKQFFYCTIDKSCMEL
HISNTSLHCRELLSHLTGSLQTETAERAMFFRGTGGLLNYKDYSLSVYNCCFSINSPDSITETGKGIAEGGMKVLSLSLL
KD

Sequences:

>Translated_162_residues
MTKFLFHGIWCTVVLVLCACITALAVVKMGNFTNPTLVHQDPSTPPPPFLKIKKLGVRKRIISPEKQFFYCTIDKSCMEL
HISNTSLHCRELLSHLTGSLQTETAERAMFFRGTGGLLNYKDYSLSVYNCCFSINSPDSITETGKGIAEGGMKVLSLSLL
KD
>Mature_161_residues
TKFLFHGIWCTVVLVLCACITALAVVKMGNFTNPTLVHQDPSTPPPPFLKIKKLGVRKRIISPEKQFFYCTIDKSCMELH
ISNTSLHCRELLSHLTGSLQTETAERAMFFRGTGGLLNYKDYSLSVYNCCFSINSPDSITETGKGIAEGGMKVLSLSLLK
D

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17968; Mature: 17837

Theoretical pI: Translated: 8.58; Mature: 8.58

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
8.0 %Cys+Met (Translated Protein)
5.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKFLFHGIWCTVVLVLCACITALAVVKMGNFTNPTLVHQDPSTPPPPFLKIKKLGVRKR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHH
IISPEKQFFYCTIDKSCMELHISNTSLHCRELLSHLTGSLQTETAERAMFFRGTGGLLNY
HCCCCCEEEEEEECCCCEEEEECCCCHHHHHHHHHHCCCCCHHHHHHEEEEECCCCCCCC
KDYSLSVYNCCFSINSPDSITETGKGIAEGGMKVLSLSLLKD
CCCCEEEEEEEEECCCCCCHHHHCCCHHHCCHHHHHHHHHCC
>Mature Secondary Structure 
TKFLFHGIWCTVVLVLCACITALAVVKMGNFTNPTLVHQDPSTPPPPFLKIKKLGVRKR
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHH
IISPEKQFFYCTIDKSCMELHISNTSLHCRELLSHLTGSLQTETAERAMFFRGTGGLLNY
HCCCCCEEEEEEECCCCEEEEECCCCHHHHHHHHHHCCCCCHHHHHHEEEEECCCCCCCC
KDYSLSVYNCCFSINSPDSITETGKGIAEGGMKVLSLSLLKD
CCCCEEEEEEEEECCCCCCHHHHCCCHHHCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA