| Definition | Chlamydia muridarum Nigg, complete genome. |
|---|---|
| Accession | NC_002620 |
| Length | 1,072,950 |
Click here to switch to the map view.
The map label for this gene is Not Available
Identifier: 15834645
GI number: 15834645
Start: 26684
End: 28513
Strand: Direct
Name: Not Available
Synonym: TC0020
Alternate gene names: NA
Gene position: 26684-28513 (Clockwise)
Preceding gene: 15834644
Following gene: 15834646
Centisome position: 2.49
GC content: 37.81
Gene sequence:
>1830_bases GTGGTTCGCGTTTTTTTATTAGTGGGTTTTCTCCTTTCTTGTTTCTCCGCAGGAAGCAAGTTGTATCTATTTTTTTCTTC TTGGGAGACTACTCCAGAGCAATATGATGGGAAACATCAAGCTGTTGCACGATTAAGAGAAAAAAGTACTTTGTCAGAAG GGCTTCCCATCGAACAAGAGCAAATGTATTTACTCTGTTGCCAAGGGTTTACTTTACAAACACAAAGAAAATTTAAGGAA TCGGAAGAAATTTTCTCTCGTATTTACAAAAAGAAAACCTCTTCACCCTTTTTTTTAAAGCGAGAGCTATTAGAGGGGCG TATCATTAACGCCTATTTTTTGGATAACATTCCATTAATGGCAGGCTATATTGCGGAGTTAGAACAAGAAGCTGGATCGG AAGCACATATTTGTTTGTTCAAAGCTTTACATGCCTATCGTGAAAAAAAATATAACGTAGCAATTGATGAGCTTTCTCAC TGGTTTGAACACATAGAAAAGACCAAGCCTTTGTGTTTGGATACGAATATCTATGAGTTATTCCCTTCCTATGTTCTGGA GGATATTGCAGCAGAAAGTCTGATTGGTTCCGGTCGGTATGTAGAAGGGCGGATTGTTCTTAACAGAATTTTCCACAAGA TCATGTCTCGGGAATATGCTTGGTCTGTAGATATGTACAACCGGTTAGTACTGATGTTGGGTCAGAGCTACCTTCTGGAG TTGAAAGAAGGTGTGCGTAGCGATTTGTTACCTGAATATTATAAAACCATGGTTTTCTATCAGAAGCAGATGCGGGGATT TGATGCTGTAGCATACAGGACATTTTTCCCGGAAAACGCTTTAATCCCTACAATTATGCAACATATTTTTGTTGTTCCGG AAACGATGTTGCCTCTTTTTATGGATGCGTTATTTCTTTGGGAGAATAGTTATGTAAATCCGAATTATTCCTTAGTATTG GAGGGGATAAAAAAAGAAGTCTTACAAGGCTCCCCGGATCTTCTAAAAATATGTCAGGCAATCGCCGACTCAAAAATTCA AAAATTAAAAGAGGAAGCCATAGAGGATTTCAGTAAGGAACTCGTTTTTTGGGTTGCTCAAGGAAACACGGTGCGGGCTA ATCAATATTTAGCTTTGTTAAAAATTTTAGATCCTAGGGCTTCTTGGGGACATAAGTTACTACTTTCTGAGCAAGATTTT GTAAAAATAGTTTGCGAAGATGACGAACATTTTTCACGACTGAAAGACTATCTTATTTTATGGGAAGAGCAAGATGTTGC CGATGTAGATCGGCAACAGTTAGTGCACTATCTCTTGTTTAGCGCAGAGAATTTATGGAGAATTGGCAAGGAAGAAGCCT GTGTGCGTTTATTAAAAGAAATTATAGCGTTCTCTCATTATGACAAGGTTTGTCAAAATCAAGTGTTGCGAATTGTTAAG CGTTTTTATACGCAGGCTTTATCTATGCGGACTTTTCCACACTTAATATTAATAGAAGATTTTTTAGATGATGTGGGGTT GACGACGGCATTAGTTAGTGATGCTGAGATAGCAAATTGTTTAGCAGATGCGCAGTATCTGTTTTCTACGAAAGATTATC GTCTTTGTATTATATATAGTTCTTGGTTAGCACGAGTATCTCCTTCTACAGAAGTTTTACGATTGCTTGGGTTGAGCCTA GCAGGACAAAAAGAATATCAAGAGGCATGGGAAATTTTACAAAAGCTTCCTTTAGGTAAGGATACTTGTGATTCCCAAGT GCAGAAGGCTTTGCTTTTGTGCCATAAATATATAACACGACAACAAAAAAATACTTTCTTCCGTGAATGA
Upstream 100 bases:
>100_bases CGCGGCACTTTAGTGGGCTATTTCTTGGTATTGGGTCTAGATGAGACCTGAACATAGAGTTCAGCTGAAGATCAAGCATT TTTACGAGAGAAAAGGCTTT
Downstream 100 bases:
>100_bases AACTTTACACGTACAAAATATTCTCCAATCTCTATTAGCTCAACACATTCTCCTTCCTTTTGATCTAGTTTTCGCTCAGA AGCACTTGGCTCAGACATCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 609; Mature: 609
Protein sequence:
>609_residues MVRVFLLVGFLLSCFSAGSKLYLFFSSWETTPEQYDGKHQAVARLREKSTLSEGLPIEQEQMYLLCCQGFTLQTQRKFKE SEEIFSRIYKKKTSSPFFLKRELLEGRIINAYFLDNIPLMAGYIAELEQEAGSEAHICLFKALHAYREKKYNVAIDELSH WFEHIEKTKPLCLDTNIYELFPSYVLEDIAAESLIGSGRYVEGRIVLNRIFHKIMSREYAWSVDMYNRLVLMLGQSYLLE LKEGVRSDLLPEYYKTMVFYQKQMRGFDAVAYRTFFPENALIPTIMQHIFVVPETMLPLFMDALFLWENSYVNPNYSLVL EGIKKEVLQGSPDLLKICQAIADSKIQKLKEEAIEDFSKELVFWVAQGNTVRANQYLALLKILDPRASWGHKLLLSEQDF VKIVCEDDEHFSRLKDYLILWEEQDVADVDRQQLVHYLLFSAENLWRIGKEEACVRLLKEIIAFSHYDKVCQNQVLRIVK RFYTQALSMRTFPHLILIEDFLDDVGLTTALVSDAEIANCLADAQYLFSTKDYRLCIIYSSWLARVSPSTEVLRLLGLSL AGQKEYQEAWEILQKLPLGKDTCDSQVQKALLLCHKYITRQQKNTFFRE
Sequences:
>Translated_609_residues MVRVFLLVGFLLSCFSAGSKLYLFFSSWETTPEQYDGKHQAVARLREKSTLSEGLPIEQEQMYLLCCQGFTLQTQRKFKE SEEIFSRIYKKKTSSPFFLKRELLEGRIINAYFLDNIPLMAGYIAELEQEAGSEAHICLFKALHAYREKKYNVAIDELSH WFEHIEKTKPLCLDTNIYELFPSYVLEDIAAESLIGSGRYVEGRIVLNRIFHKIMSREYAWSVDMYNRLVLMLGQSYLLE LKEGVRSDLLPEYYKTMVFYQKQMRGFDAVAYRTFFPENALIPTIMQHIFVVPETMLPLFMDALFLWENSYVNPNYSLVL EGIKKEVLQGSPDLLKICQAIADSKIQKLKEEAIEDFSKELVFWVAQGNTVRANQYLALLKILDPRASWGHKLLLSEQDF VKIVCEDDEHFSRLKDYLILWEEQDVADVDRQQLVHYLLFSAENLWRIGKEEACVRLLKEIIAFSHYDKVCQNQVLRIVK RFYTQALSMRTFPHLILIEDFLDDVGLTTALVSDAEIANCLADAQYLFSTKDYRLCIIYSSWLARVSPSTEVLRLLGLSL AGQKEYQEAWEILQKLPLGKDTCDSQVQKALLLCHKYITRQQKNTFFRE >Mature_609_residues MVRVFLLVGFLLSCFSAGSKLYLFFSSWETTPEQYDGKHQAVARLREKSTLSEGLPIEQEQMYLLCCQGFTLQTQRKFKE SEEIFSRIYKKKTSSPFFLKRELLEGRIINAYFLDNIPLMAGYIAELEQEAGSEAHICLFKALHAYREKKYNVAIDELSH WFEHIEKTKPLCLDTNIYELFPSYVLEDIAAESLIGSGRYVEGRIVLNRIFHKIMSREYAWSVDMYNRLVLMLGQSYLLE LKEGVRSDLLPEYYKTMVFYQKQMRGFDAVAYRTFFPENALIPTIMQHIFVVPETMLPLFMDALFLWENSYVNPNYSLVL EGIKKEVLQGSPDLLKICQAIADSKIQKLKEEAIEDFSKELVFWVAQGNTVRANQYLALLKILDPRASWGHKLLLSEQDF VKIVCEDDEHFSRLKDYLILWEEQDVADVDRQQLVHYLLFSAENLWRIGKEEACVRLLKEIIAFSHYDKVCQNQVLRIVK RFYTQALSMRTFPHLILIEDFLDDVGLTTALVSDAEIANCLADAQYLFSTKDYRLCIIYSSWLARVSPSTEVLRLLGLSL AGQKEYQEAWEILQKLPLGKDTCDSQVQKALLLCHKYITRQQKNTFFRE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 71012; Mature: 71012
Theoretical pI: Translated: 5.96; Mature: 5.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRVFLLVGFLLSCFSAGSKLYLFFSSWETTPEQYDGKHQAVARLREKSTLSEGLPIEQE CHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHCCCHHHHHHHHHHHHHHHCCCCCCHH QMYLLCCQGFTLQTQRKFKESEEIFSRIYKKKTSSPFFLKRELLEGRIINAYFLDNIPLM CEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCEEEEHHHCCCHHH AGYIAELEQEAGSEAHICLFKALHAYREKKYNVAIDELSHWFEHIEKTKPLCLDTNIYEL HHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEECCCHHHH FPSYVLEDIAAESLIGSGRYVEGRIVLNRIFHKIMSREYAWSVDMYNRLVLMLGQSYLLE HHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHCCHHCEEHHHHHHHHHHHHHHHHHH LKEGVRSDLLPEYYKTMVFYQKQMRGFDAVAYRTFFPENALIPTIMQHIFVVPETMLPLF HHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHH MDALFLWENSYVNPNYSLVLEGIKKEVLQGSPDLLKICQAIADSKIQKLKEEAIEDFSKE HHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVFWVAQGNTVRANQYLALLKILDPRASWGHKLLLSEQDFVKIVCEDDEHFSRLKDYLIL HEEEEECCCEEEHHHHHHHHHHHCCCCCCCCEEEECCCCEEEEEECCCHHHHHHHHHEEE WEEQDVADVDRQQLVHYLLFSAENLWRIGKEEACVRLLKEIIAFSHYDKVCQNQVLRIVK ECCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RFYTQALSMRTFPHLILIEDFLDDVGLTTALVSDAEIANCLADAQYLFSTKDYRLCIIYS HHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEH SWLARVSPSTEVLRLLGLSLAGQKEYQEAWEILQKLPLGKDTCDSQVQKALLLCHKYITR HHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH QQKNTFFRE HHHHCCCCC >Mature Secondary Structure MVRVFLLVGFLLSCFSAGSKLYLFFSSWETTPEQYDGKHQAVARLREKSTLSEGLPIEQE CHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHCCCHHHHHHHHHHHHHHHCCCCCCHH QMYLLCCQGFTLQTQRKFKESEEIFSRIYKKKTSSPFFLKRELLEGRIINAYFLDNIPLM CEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCEEEEHHHCCCHHH AGYIAELEQEAGSEAHICLFKALHAYREKKYNVAIDELSHWFEHIEKTKPLCLDTNIYEL HHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEECCCHHHH FPSYVLEDIAAESLIGSGRYVEGRIVLNRIFHKIMSREYAWSVDMYNRLVLMLGQSYLLE HHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHCCHHCEEHHHHHHHHHHHHHHHHHH LKEGVRSDLLPEYYKTMVFYQKQMRGFDAVAYRTFFPENALIPTIMQHIFVVPETMLPLF HHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHH MDALFLWENSYVNPNYSLVLEGIKKEVLQGSPDLLKICQAIADSKIQKLKEEAIEDFSKE HHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVFWVAQGNTVRANQYLALLKILDPRASWGHKLLLSEQDFVKIVCEDDEHFSRLKDYLIL HEEEEECCCEEEHHHHHHHHHHHCCCCCCCCEEEECCCCEEEEEECCCHHHHHHHHHEEE WEEQDVADVDRQQLVHYLLFSAENLWRIGKEEACVRLLKEIIAFSHYDKVCQNQVLRIVK ECCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RFYTQALSMRTFPHLILIEDFLDDVGLTTALVSDAEIANCLADAQYLFSTKDYRLCIIYS HHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEH SWLARVSPSTEVLRLLGLSLAGQKEYQEAWEILQKLPLGKDTCDSQVQKALLLCHKYITR HHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH QQKNTFFRE HHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA