Definition Chlamydia muridarum Nigg, complete genome.
Accession NC_002620
Length 1,072,950

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Identifier: 15834645

GI number: 15834645

Start: 26684

End: 28513

Strand: Direct

Name: Not Available

Synonym: TC0020

Alternate gene names: NA

Gene position: 26684-28513 (Clockwise)

Preceding gene: 15834644

Following gene: 15834646

Centisome position: 2.49

GC content: 37.81

Gene sequence:

>1830_bases
GTGGTTCGCGTTTTTTTATTAGTGGGTTTTCTCCTTTCTTGTTTCTCCGCAGGAAGCAAGTTGTATCTATTTTTTTCTTC
TTGGGAGACTACTCCAGAGCAATATGATGGGAAACATCAAGCTGTTGCACGATTAAGAGAAAAAAGTACTTTGTCAGAAG
GGCTTCCCATCGAACAAGAGCAAATGTATTTACTCTGTTGCCAAGGGTTTACTTTACAAACACAAAGAAAATTTAAGGAA
TCGGAAGAAATTTTCTCTCGTATTTACAAAAAGAAAACCTCTTCACCCTTTTTTTTAAAGCGAGAGCTATTAGAGGGGCG
TATCATTAACGCCTATTTTTTGGATAACATTCCATTAATGGCAGGCTATATTGCGGAGTTAGAACAAGAAGCTGGATCGG
AAGCACATATTTGTTTGTTCAAAGCTTTACATGCCTATCGTGAAAAAAAATATAACGTAGCAATTGATGAGCTTTCTCAC
TGGTTTGAACACATAGAAAAGACCAAGCCTTTGTGTTTGGATACGAATATCTATGAGTTATTCCCTTCCTATGTTCTGGA
GGATATTGCAGCAGAAAGTCTGATTGGTTCCGGTCGGTATGTAGAAGGGCGGATTGTTCTTAACAGAATTTTCCACAAGA
TCATGTCTCGGGAATATGCTTGGTCTGTAGATATGTACAACCGGTTAGTACTGATGTTGGGTCAGAGCTACCTTCTGGAG
TTGAAAGAAGGTGTGCGTAGCGATTTGTTACCTGAATATTATAAAACCATGGTTTTCTATCAGAAGCAGATGCGGGGATT
TGATGCTGTAGCATACAGGACATTTTTCCCGGAAAACGCTTTAATCCCTACAATTATGCAACATATTTTTGTTGTTCCGG
AAACGATGTTGCCTCTTTTTATGGATGCGTTATTTCTTTGGGAGAATAGTTATGTAAATCCGAATTATTCCTTAGTATTG
GAGGGGATAAAAAAAGAAGTCTTACAAGGCTCCCCGGATCTTCTAAAAATATGTCAGGCAATCGCCGACTCAAAAATTCA
AAAATTAAAAGAGGAAGCCATAGAGGATTTCAGTAAGGAACTCGTTTTTTGGGTTGCTCAAGGAAACACGGTGCGGGCTA
ATCAATATTTAGCTTTGTTAAAAATTTTAGATCCTAGGGCTTCTTGGGGACATAAGTTACTACTTTCTGAGCAAGATTTT
GTAAAAATAGTTTGCGAAGATGACGAACATTTTTCACGACTGAAAGACTATCTTATTTTATGGGAAGAGCAAGATGTTGC
CGATGTAGATCGGCAACAGTTAGTGCACTATCTCTTGTTTAGCGCAGAGAATTTATGGAGAATTGGCAAGGAAGAAGCCT
GTGTGCGTTTATTAAAAGAAATTATAGCGTTCTCTCATTATGACAAGGTTTGTCAAAATCAAGTGTTGCGAATTGTTAAG
CGTTTTTATACGCAGGCTTTATCTATGCGGACTTTTCCACACTTAATATTAATAGAAGATTTTTTAGATGATGTGGGGTT
GACGACGGCATTAGTTAGTGATGCTGAGATAGCAAATTGTTTAGCAGATGCGCAGTATCTGTTTTCTACGAAAGATTATC
GTCTTTGTATTATATATAGTTCTTGGTTAGCACGAGTATCTCCTTCTACAGAAGTTTTACGATTGCTTGGGTTGAGCCTA
GCAGGACAAAAAGAATATCAAGAGGCATGGGAAATTTTACAAAAGCTTCCTTTAGGTAAGGATACTTGTGATTCCCAAGT
GCAGAAGGCTTTGCTTTTGTGCCATAAATATATAACACGACAACAAAAAAATACTTTCTTCCGTGAATGA

Upstream 100 bases:

>100_bases
CGCGGCACTTTAGTGGGCTATTTCTTGGTATTGGGTCTAGATGAGACCTGAACATAGAGTTCAGCTGAAGATCAAGCATT
TTTACGAGAGAAAAGGCTTT

Downstream 100 bases:

>100_bases
AACTTTACACGTACAAAATATTCTCCAATCTCTATTAGCTCAACACATTCTCCTTCCTTTTGATCTAGTTTTCGCTCAGA
AGCACTTGGCTCAGACATCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 609; Mature: 609

Protein sequence:

>609_residues
MVRVFLLVGFLLSCFSAGSKLYLFFSSWETTPEQYDGKHQAVARLREKSTLSEGLPIEQEQMYLLCCQGFTLQTQRKFKE
SEEIFSRIYKKKTSSPFFLKRELLEGRIINAYFLDNIPLMAGYIAELEQEAGSEAHICLFKALHAYREKKYNVAIDELSH
WFEHIEKTKPLCLDTNIYELFPSYVLEDIAAESLIGSGRYVEGRIVLNRIFHKIMSREYAWSVDMYNRLVLMLGQSYLLE
LKEGVRSDLLPEYYKTMVFYQKQMRGFDAVAYRTFFPENALIPTIMQHIFVVPETMLPLFMDALFLWENSYVNPNYSLVL
EGIKKEVLQGSPDLLKICQAIADSKIQKLKEEAIEDFSKELVFWVAQGNTVRANQYLALLKILDPRASWGHKLLLSEQDF
VKIVCEDDEHFSRLKDYLILWEEQDVADVDRQQLVHYLLFSAENLWRIGKEEACVRLLKEIIAFSHYDKVCQNQVLRIVK
RFYTQALSMRTFPHLILIEDFLDDVGLTTALVSDAEIANCLADAQYLFSTKDYRLCIIYSSWLARVSPSTEVLRLLGLSL
AGQKEYQEAWEILQKLPLGKDTCDSQVQKALLLCHKYITRQQKNTFFRE

Sequences:

>Translated_609_residues
MVRVFLLVGFLLSCFSAGSKLYLFFSSWETTPEQYDGKHQAVARLREKSTLSEGLPIEQEQMYLLCCQGFTLQTQRKFKE
SEEIFSRIYKKKTSSPFFLKRELLEGRIINAYFLDNIPLMAGYIAELEQEAGSEAHICLFKALHAYREKKYNVAIDELSH
WFEHIEKTKPLCLDTNIYELFPSYVLEDIAAESLIGSGRYVEGRIVLNRIFHKIMSREYAWSVDMYNRLVLMLGQSYLLE
LKEGVRSDLLPEYYKTMVFYQKQMRGFDAVAYRTFFPENALIPTIMQHIFVVPETMLPLFMDALFLWENSYVNPNYSLVL
EGIKKEVLQGSPDLLKICQAIADSKIQKLKEEAIEDFSKELVFWVAQGNTVRANQYLALLKILDPRASWGHKLLLSEQDF
VKIVCEDDEHFSRLKDYLILWEEQDVADVDRQQLVHYLLFSAENLWRIGKEEACVRLLKEIIAFSHYDKVCQNQVLRIVK
RFYTQALSMRTFPHLILIEDFLDDVGLTTALVSDAEIANCLADAQYLFSTKDYRLCIIYSSWLARVSPSTEVLRLLGLSL
AGQKEYQEAWEILQKLPLGKDTCDSQVQKALLLCHKYITRQQKNTFFRE
>Mature_609_residues
MVRVFLLVGFLLSCFSAGSKLYLFFSSWETTPEQYDGKHQAVARLREKSTLSEGLPIEQEQMYLLCCQGFTLQTQRKFKE
SEEIFSRIYKKKTSSPFFLKRELLEGRIINAYFLDNIPLMAGYIAELEQEAGSEAHICLFKALHAYREKKYNVAIDELSH
WFEHIEKTKPLCLDTNIYELFPSYVLEDIAAESLIGSGRYVEGRIVLNRIFHKIMSREYAWSVDMYNRLVLMLGQSYLLE
LKEGVRSDLLPEYYKTMVFYQKQMRGFDAVAYRTFFPENALIPTIMQHIFVVPETMLPLFMDALFLWENSYVNPNYSLVL
EGIKKEVLQGSPDLLKICQAIADSKIQKLKEEAIEDFSKELVFWVAQGNTVRANQYLALLKILDPRASWGHKLLLSEQDF
VKIVCEDDEHFSRLKDYLILWEEQDVADVDRQQLVHYLLFSAENLWRIGKEEACVRLLKEIIAFSHYDKVCQNQVLRIVK
RFYTQALSMRTFPHLILIEDFLDDVGLTTALVSDAEIANCLADAQYLFSTKDYRLCIIYSSWLARVSPSTEVLRLLGLSL
AGQKEYQEAWEILQKLPLGKDTCDSQVQKALLLCHKYITRQQKNTFFRE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 71012; Mature: 71012

Theoretical pI: Translated: 5.96; Mature: 5.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRVFLLVGFLLSCFSAGSKLYLFFSSWETTPEQYDGKHQAVARLREKSTLSEGLPIEQE
CHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHCCCHHHHHHHHHHHHHHHCCCCCCHH
QMYLLCCQGFTLQTQRKFKESEEIFSRIYKKKTSSPFFLKRELLEGRIINAYFLDNIPLM
CEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCEEEEHHHCCCHHH
AGYIAELEQEAGSEAHICLFKALHAYREKKYNVAIDELSHWFEHIEKTKPLCLDTNIYEL
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEECCCHHHH
FPSYVLEDIAAESLIGSGRYVEGRIVLNRIFHKIMSREYAWSVDMYNRLVLMLGQSYLLE
HHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHCCHHCEEHHHHHHHHHHHHHHHHHH
LKEGVRSDLLPEYYKTMVFYQKQMRGFDAVAYRTFFPENALIPTIMQHIFVVPETMLPLF
HHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHH
MDALFLWENSYVNPNYSLVLEGIKKEVLQGSPDLLKICQAIADSKIQKLKEEAIEDFSKE
HHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVFWVAQGNTVRANQYLALLKILDPRASWGHKLLLSEQDFVKIVCEDDEHFSRLKDYLIL
HEEEEECCCEEEHHHHHHHHHHHCCCCCCCCEEEECCCCEEEEEECCCHHHHHHHHHEEE
WEEQDVADVDRQQLVHYLLFSAENLWRIGKEEACVRLLKEIIAFSHYDKVCQNQVLRIVK
ECCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RFYTQALSMRTFPHLILIEDFLDDVGLTTALVSDAEIANCLADAQYLFSTKDYRLCIIYS
HHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEH
SWLARVSPSTEVLRLLGLSLAGQKEYQEAWEILQKLPLGKDTCDSQVQKALLLCHKYITR
HHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
QQKNTFFRE
HHHHCCCCC
>Mature Secondary Structure
MVRVFLLVGFLLSCFSAGSKLYLFFSSWETTPEQYDGKHQAVARLREKSTLSEGLPIEQE
CHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHCCCHHHHHHHHHHHHHHHCCCCCCHH
QMYLLCCQGFTLQTQRKFKESEEIFSRIYKKKTSSPFFLKRELLEGRIINAYFLDNIPLM
CEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCEEEEHHHCCCHHH
AGYIAELEQEAGSEAHICLFKALHAYREKKYNVAIDELSHWFEHIEKTKPLCLDTNIYEL
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEECCCHHHH
FPSYVLEDIAAESLIGSGRYVEGRIVLNRIFHKIMSREYAWSVDMYNRLVLMLGQSYLLE
HHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHCCHHCEEHHHHHHHHHHHHHHHHHH
LKEGVRSDLLPEYYKTMVFYQKQMRGFDAVAYRTFFPENALIPTIMQHIFVVPETMLPLF
HHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHH
MDALFLWENSYVNPNYSLVLEGIKKEVLQGSPDLLKICQAIADSKIQKLKEEAIEDFSKE
HHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVFWVAQGNTVRANQYLALLKILDPRASWGHKLLLSEQDFVKIVCEDDEHFSRLKDYLIL
HEEEEECCCEEEHHHHHHHHHHHCCCCCCCCEEEECCCCEEEEEECCCHHHHHHHHHEEE
WEEQDVADVDRQQLVHYLLFSAENLWRIGKEEACVRLLKEIIAFSHYDKVCQNQVLRIVK
ECCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RFYTQALSMRTFPHLILIEDFLDDVGLTTALVSDAEIANCLADAQYLFSTKDYRLCIIYS
HHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEH
SWLARVSPSTEVLRLLGLSLAGQKEYQEAWEILQKLPLGKDTCDSQVQKALLLCHKYITR
HHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
QQKNTFFRE
HHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA