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The map label for this gene is recA

Identifier: 15834644

GI number: 15834644

Start: 25348

End: 26412

Strand: Direct

Name: recA

Synonym: TC0019

Alternate gene names: 15834644

Gene position: 25348-26412 (Clockwise)

Preceding gene: 15834643

Following gene: 15834645

Centisome position: 2.36

GC content: 43.94

Gene sequence:

>1065_bases
ATGAGCGTTCCCGACAGAAAAAGGGCTTTGGAAGCTGCCATTGCTTACATCGAGAAGCAATTTGGCGCAGGATCTATCAT
GAGTTTAGGGAAGCATTCTTCTGCTCATGAGATATCAACTATTAAAACTGGCGCATTGTCGTTAGATTTAGCTCTGGGAA
TAGGAGGAGTTCCTAAAGGAAGAATTATAGAGATTTTTGGCCCAGAGTCTTCAGGGAAAACGACTCTAGCAACGCATATC
GTGGCTAATGCCCAAAAAATGGGGGGTGTGGCAGCTTATATTGATGCTGAGCACGCCTTAGATCCTAATTATGCTGCGCT
AATTGGTGCTAATATTAATGATTTAATGATCTCCCAGCCCGATTGTGGAGAGGATGCTTTGAGTATTGCAGAGCTTCTGG
CTCGATCGGGAGCTGTTGATGTCATCGTTATCGATTCGGTGGCAGCCTTGGTTCCAAAGAGCGAATTGGAAGGAGAAATT
GGAGATGTGCATGTGGGTTTACAAGCACGCATGATGTCTCAGGCTTTACGAAAATTAACGGCGACGTTGGCACGAACGAA
CACTTGTGCGATTTTTATTAACCAAATTCGAGAGAAGATAGGTGTTAGCTTCGGGAATCCTGAGACCACAACAGGGGGGC
GGGCACTTAAATTTTACTCTTCTATTCGTATGGATATTCGTCGTATCGGTGCTATCAAAGGAGGCGAAAACTTCGATATA
GGAAACCGAATTAAGGTGAAGGTCGCAAAAAATAAATTAGCTCCTCCATTTCGAACTGCTGAATTTGATATTTTGTTCAA
TGAAGGGATTTCTTCTGCGGGATGCATTATTGACCTTGCTGTAGAAAAAAACATTATTGATAAGAAAGGATCTTGGTTCA
ATTACCAAGATCGTAAGTTGGGTCAAGGCCGAGAGGCTGTGCGCGAAGAGCTGAAAAGGAATAAAGAGTTATTCCAAGAG
TTAGAGCGCCGTATTTATGAGTCTGTACAAGCTTCCTCATCACAGGCGCTAGCATCTGCTTGCTTGGACCAGGAGGCTCG
AGAAGTAGCAGAAGCAGCGAAATAA

Upstream 100 bases:

>100_bases
TGAAATATTGCAAACTGACGCCACGAAATACAGGGGAGGAGTGCGGGTGGCAACCTCCTAAAGTAGAGTCTTCTAGACAC
AGCGCAACAAGGGAGTATAC

Downstream 100 bases:

>100_bases
AGCAACGTTTTCTGTACTGTTGTAATCAAGGAAAAGAGATTTCTCTTTTCCTTGATATTTTCCCCCCTCTGCATTTTCAA
GTCGCGACCTAAAAGGTTGT

Product: recombinase A

Products: NA

Alternate protein names: Recombinase A

Number of amino acids: Translated: 354; Mature: 353

Protein sequence:

>354_residues
MSVPDRKRALEAAIAYIEKQFGAGSIMSLGKHSSAHEISTIKTGALSLDLALGIGGVPKGRIIEIFGPESSGKTTLATHI
VANAQKMGGVAAYIDAEHALDPNYAALIGANINDLMISQPDCGEDALSIAELLARSGAVDVIVIDSVAALVPKSELEGEI
GDVHVGLQARMMSQALRKLTATLARTNTCAIFINQIREKIGVSFGNPETTTGGRALKFYSSIRMDIRRIGAIKGGENFDI
GNRIKVKVAKNKLAPPFRTAEFDILFNEGISSAGCIIDLAVEKNIIDKKGSWFNYQDRKLGQGREAVREELKRNKELFQE
LERRIYESVQASSSQALASACLDQEAREVAEAAK

Sequences:

>Translated_354_residues
MSVPDRKRALEAAIAYIEKQFGAGSIMSLGKHSSAHEISTIKTGALSLDLALGIGGVPKGRIIEIFGPESSGKTTLATHI
VANAQKMGGVAAYIDAEHALDPNYAALIGANINDLMISQPDCGEDALSIAELLARSGAVDVIVIDSVAALVPKSELEGEI
GDVHVGLQARMMSQALRKLTATLARTNTCAIFINQIREKIGVSFGNPETTTGGRALKFYSSIRMDIRRIGAIKGGENFDI
GNRIKVKVAKNKLAPPFRTAEFDILFNEGISSAGCIIDLAVEKNIIDKKGSWFNYQDRKLGQGREAVREELKRNKELFQE
LERRIYESVQASSSQALASACLDQEAREVAEAAK
>Mature_353_residues
SVPDRKRALEAAIAYIEKQFGAGSIMSLGKHSSAHEISTIKTGALSLDLALGIGGVPKGRIIEIFGPESSGKTTLATHIV
ANAQKMGGVAAYIDAEHALDPNYAALIGANINDLMISQPDCGEDALSIAELLARSGAVDVIVIDSVAALVPKSELEGEIG
DVHVGLQARMMSQALRKLTATLARTNTCAIFINQIREKIGVSFGNPETTTGGRALKFYSSIRMDIRRIGAIKGGENFDIG
NRIKVKVAKNKLAPPFRTAEFDILFNEGISSAGCIIDLAVEKNIIDKKGSWFNYQDRKLGQGREAVREELKRNKELFQEL
ERRIYESVQASSSQALASACLDQEAREVAEAAK

Specific function: Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with lexA causing its activation

COG id: COG0468

COG function: function code L; RecA/RadA recombinase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recA family

Homologues:

Organism=Escherichia coli, GI1789051, Length=323, Percent_Identity=59.7523219814242, Blast_Score=398, Evalue=1e-112,

Paralogues:

None

Copy number: 1548 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800-1200 (L-broth) 40,000-60,000 (L-broth + Nalidixate) 4,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): RECA_CHLMU (Q9PLS6)

Other databases:

- EMBL:   AE002160
- PIR:   F81750
- RefSeq:   NP_296403.1
- ProteinModelPortal:   Q9PLS6
- SMR:   Q9PLS6
- GeneID:   1245543
- GenomeReviews:   AE002160_GR
- KEGG:   cmu:TC0019
- TIGR:   TC_0019
- HOGENOM:   HBG339889
- OMA:   GRDNTIT
- ProtClustDB:   PRK09354
- BioCyc:   CMUR243161:TC_0019-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00268
- InterPro:   IPR003593
- InterPro:   IPR013765
- InterPro:   IPR020584
- InterPro:   IPR020588
- InterPro:   IPR020587
- PANTHER:   PTHR22942:SF1
- PRINTS:   PR00142
- SMART:   SM00382
- TIGRFAMs:   TIGR02012

Pfam domain/function: PF00154 RecA

EC number: NA

Molecular weight: Translated: 38071; Mature: 37940

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: PS00321 RECA_1; PS50162 RECA_2; PS50163 RECA_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVPDRKRALEAAIAYIEKQFGAGSIMSLGKHSSAHEISTIKTGALSLDLALGIGGVPKG
CCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCHHHHEECCCEEEEEEECCCCCCCC
RIIEIFGPESSGKTTLATHIVANAQKMGGVAAYIDAEHALDPNYAALIGANINDLMISQP
CEEEEECCCCCCCHHHHHHHHHHHHHHCCEEEEEEHHHCCCCCCEEEEECCCHHEEECCC
DCGEDALSIAELLARSGAVDVIVIDSVAALVPKSELEGEIGDVHVGLQARMMSQALRKLT
CCCHHHHHHHHHHHHCCCEEEEEECHHHHHCCHHHHCCCCCEEEECHHHHHHHHHHHHHH
ATLARTNTCAIFINQIREKIGVSFGNPETTTGGRALKFYSSIRMDIRRIGAIKGGENFDI
HHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC
GNRIKVKVAKNKLAPPFRTAEFDILFNEGISSAGCIIDLAVEKNIIDKKGSWFNYQDRKL
CCEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCEEEEEECCCHHCCCCCCCCCCHHHC
GQGREAVREELKRNKELFQELERRIYESVQASSSQALASACLDQEAREVAEAAK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SVPDRKRALEAAIAYIEKQFGAGSIMSLGKHSSAHEISTIKTGALSLDLALGIGGVPKG
CCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCHHHHEECCCEEEEEEECCCCCCCC
RIIEIFGPESSGKTTLATHIVANAQKMGGVAAYIDAEHALDPNYAALIGANINDLMISQP
CEEEEECCCCCCCHHHHHHHHHHHHHHCCEEEEEEHHHCCCCCCEEEEECCCHHEEECCC
DCGEDALSIAELLARSGAVDVIVIDSVAALVPKSELEGEIGDVHVGLQARMMSQALRKLT
CCCHHHHHHHHHHHHCCCEEEEEECHHHHHCCHHHHCCCCCEEEECHHHHHHHHHHHHHH
ATLARTNTCAIFINQIREKIGVSFGNPETTTGGRALKFYSSIRMDIRRIGAIKGGENFDI
HHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC
GNRIKVKVAKNKLAPPFRTAEFDILFNEGISSAGCIIDLAVEKNIIDKKGSWFNYQDRKL
CCEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCEEEEEECCCHHCCCCCCCCCCHHHC
GQGREAVREELKRNKELFQELERRIYESVQASSSQALASACLDQEAREVAEAAK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10684935