Definition Chlamydia muridarum Nigg, complete genome.
Accession NC_002620
Length 1,072,950

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 15834640

GI number: 15834640

Start: 21367

End: 22746

Strand: Direct

Name: Not Available

Synonym: TC0015

Alternate gene names: NA

Gene position: 21367-22746 (Clockwise)

Preceding gene: 15834637

Following gene: 15834641

Centisome position: 1.99

GC content: 41.01

Gene sequence:

>1380_bases
ATGGATTTTAAGCTGCCCATTTACTGCATGGGGATAACTCAAGATGCAGAAAACGTTACCAGGATAGCAATTTTACAGAA
AACCTGTAAAGGGTGGCGTCTGTGTTGTTGCGATAAGCTTACTGAAGAAGTCGCGTTGTCTTTGCCAAAAAGGTTTCTAT
CTGCAAAGGTAGTTTTGTCCTTACAGGGACAGGAAACTTTAGTAAAAAGTGTCTTATCTTCTTTAAAAAGCAAAAACAAT
TTTTTAAAAGTAGTTTATGCGGAGCAAGAAGCTACTGCTGCTTTCCCTTTGCAGGAGTTGGTAATCGCGCACCATCTAGG
AGGATGGAATTCTGATCAAGAGCGGGCTCTTACGCTATGGATGCTGCAAAGACAATCTATTGCTACACAAACCGCCCTTT
TGGAAGAAAAGGGGGTGTTTGCCACTCATATTTCTTGTCGAGCTAAGGATATCTTTTCTGCCCTTCAGCACACTCTTTTA
AACCGTCTTGCTTCGTATTTTTTTGTGTATGAAGGCATCGATGAAACAACCTGTTTGTTTGTGCGAGAAGGTTCTGTGTT
ATTAGCTCGTTCTTTTAAGAACGATTCCGAGGGCTTATTGGAGGATTTATTAGCCTCGTTTGCCTATGTTCAAGAGGTTT
ATAAAATCCGTTTGTCGGAGATTCATGGAGCTTACTTATCGAGTTCGTTACGAACCGTATTGAGTCGGCAGGCCGGAGTT
CCTGTGATTATAAGTCCACTCTTTCCTCATCTATCTGCTGATCAAGACTCTTATCGCGATGCTGTGGCTGCAGCGTATCA
AGGAATTCGTAGTAGCAAAACATGCTTTACTTATAGCTGGGCAGATTTTTCTCAAAAGGCTTTTGGCCATTGGATAAAAA
GAAAGCTCTTTGGTTTCACAAAACTTGCTATGGTAAGTGCTCTCTTGATGTTCATAGGCAGCGGAGTAGAATCGTTTTTT
TTAGTTCGCCAAGCTCAAAGGATGTTCAGGGAAATATCTTCTGAGAAAAAATTGCCCTGCACGCTTGGTTCAGCTCAACA
GGCTGTTAAAGAAATTTGTGAATCTGATCCCGCTAGGGAATATGCCTATCTTCCAACAGTTCCAACAAATCAGGAAGTGA
TGGATGTTCTTGGACGTATGACTGCGAATCTCCCTTCTATTTCCTTCTCTCACTATATGTATAAATTAGAGGATATTCCT
TCTGAAGAACGTCCATTGGGTGGGTACAAAGCCTATATTTCTCTACAAGGTTCTGCTAATGAAGAAGATTTTTCATCTTT
TATAGATAAGTTATCGGCTTGGTTAGGTGCTCAAGTCCTTTCTAAAAAGCTGGCAAATAGCCAATTTGATGTGCGGATGG
TTTTACTTGGGAGGGAATAA

Upstream 100 bases:

>100_bases
TACAAACTTTGTTTACTAATTAATAATATTTTTCTTGAAAAAGATGGTTTTATTTTATAAAATATGCGCTTTTCATTTTA
AAAAAGATCAAAAACGCTAA

Downstream 100 bases:

>100_bases
ATGCGCCGGATTGGAGTTGTAGTATTATTATTCTTTGCAAGTTGTGTAGCTTCTCTTCCTGCATTAGGGGTGTGGTGTTG
GCGCCAGTGTTCTTCGGAGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 459; Mature: 459

Protein sequence:

>459_residues
MDFKLPIYCMGITQDAENVTRIAILQKTCKGWRLCCCDKLTEEVALSLPKRFLSAKVVLSLQGQETLVKSVLSSLKSKNN
FLKVVYAEQEATAAFPLQELVIAHHLGGWNSDQERALTLWMLQRQSIATQTALLEEKGVFATHISCRAKDIFSALQHTLL
NRLASYFFVYEGIDETTCLFVREGSVLLARSFKNDSEGLLEDLLASFAYVQEVYKIRLSEIHGAYLSSSLRTVLSRQAGV
PVIISPLFPHLSADQDSYRDAVAAAYQGIRSSKTCFTYSWADFSQKAFGHWIKRKLFGFTKLAMVSALLMFIGSGVESFF
LVRQAQRMFREISSEKKLPCTLGSAQQAVKEICESDPAREYAYLPTVPTNQEVMDVLGRMTANLPSISFSHYMYKLEDIP
SEERPLGGYKAYISLQGSANEEDFSSFIDKLSAWLGAQVLSKKLANSQFDVRMVLLGRE

Sequences:

>Translated_459_residues
MDFKLPIYCMGITQDAENVTRIAILQKTCKGWRLCCCDKLTEEVALSLPKRFLSAKVVLSLQGQETLVKSVLSSLKSKNN
FLKVVYAEQEATAAFPLQELVIAHHLGGWNSDQERALTLWMLQRQSIATQTALLEEKGVFATHISCRAKDIFSALQHTLL
NRLASYFFVYEGIDETTCLFVREGSVLLARSFKNDSEGLLEDLLASFAYVQEVYKIRLSEIHGAYLSSSLRTVLSRQAGV
PVIISPLFPHLSADQDSYRDAVAAAYQGIRSSKTCFTYSWADFSQKAFGHWIKRKLFGFTKLAMVSALLMFIGSGVESFF
LVRQAQRMFREISSEKKLPCTLGSAQQAVKEICESDPAREYAYLPTVPTNQEVMDVLGRMTANLPSISFSHYMYKLEDIP
SEERPLGGYKAYISLQGSANEEDFSSFIDKLSAWLGAQVLSKKLANSQFDVRMVLLGRE
>Mature_459_residues
MDFKLPIYCMGITQDAENVTRIAILQKTCKGWRLCCCDKLTEEVALSLPKRFLSAKVVLSLQGQETLVKSVLSSLKSKNN
FLKVVYAEQEATAAFPLQELVIAHHLGGWNSDQERALTLWMLQRQSIATQTALLEEKGVFATHISCRAKDIFSALQHTLL
NRLASYFFVYEGIDETTCLFVREGSVLLARSFKNDSEGLLEDLLASFAYVQEVYKIRLSEIHGAYLSSSLRTVLSRQAGV
PVIISPLFPHLSADQDSYRDAVAAAYQGIRSSKTCFTYSWADFSQKAFGHWIKRKLFGFTKLAMVSALLMFIGSGVESFF
LVRQAQRMFREISSEKKLPCTLGSAQQAVKEICESDPAREYAYLPTVPTNQEVMDVLGRMTANLPSISFSHYMYKLEDIP
SEERPLGGYKAYISLQGSANEEDFSSFIDKLSAWLGAQVLSKKLANSQFDVRMVLLGRE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51513; Mature: 51513

Theoretical pI: Translated: 7.90; Mature: 7.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFKLPIYCMGITQDAENVTRIAILQKTCKGWRLCCCDKLTEEVALSLPKRFLSAKVVLS
CCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEE
LQGQETLVKSVLSSLKSKNNFLKVVYAEQEATAAFPLQELVIAHHLGGWNSDQERALTLW
ECCHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHCCHHHHHHHHHCCCCCCCHHHHHHHH
MLQRQSIATQTALLEEKGVFATHISCRAKDIFSALQHTLLNRLASYFFVYEGIDETTCLF
HHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE
VREGSVLLARSFKNDSEGLLEDLLASFAYVQEVYKIRLSEIHGAYLSSSLRTVLSRQAGV
EECCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PVIISPLFPHLSADQDSYRDAVAAAYQGIRSSKTCFTYSWADFSQKAFGHWIKRKLFGFT
CEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHH
KLAMVSALLMFIGSGVESFFLVRQAQRMFREISSEKKLPCTLGSAQQAVKEICESDPARE
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCC
YAYLPTVPTNQEVMDVLGRMTANLPSISFSHYMYKLEDIPSEERPLGGYKAYISLQGSAN
EEECCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCC
EEDFSSFIDKLSAWLGAQVLSKKLANSQFDVRMVLLGRE
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCC
>Mature Secondary Structure
MDFKLPIYCMGITQDAENVTRIAILQKTCKGWRLCCCDKLTEEVALSLPKRFLSAKVVLS
CCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEE
LQGQETLVKSVLSSLKSKNNFLKVVYAEQEATAAFPLQELVIAHHLGGWNSDQERALTLW
ECCHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHCCHHHHHHHHHCCCCCCCHHHHHHHH
MLQRQSIATQTALLEEKGVFATHISCRAKDIFSALQHTLLNRLASYFFVYEGIDETTCLF
HHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE
VREGSVLLARSFKNDSEGLLEDLLASFAYVQEVYKIRLSEIHGAYLSSSLRTVLSRQAGV
EECCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PVIISPLFPHLSADQDSYRDAVAAAYQGIRSSKTCFTYSWADFSQKAFGHWIKRKLFGFT
CEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHH
KLAMVSALLMFIGSGVESFFLVRQAQRMFREISSEKKLPCTLGSAQQAVKEICESDPARE
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCC
YAYLPTVPTNQEVMDVLGRMTANLPSISFSHYMYKLEDIPSEERPLGGYKAYISLQGSAN
EEECCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCC
EEDFSSFIDKLSAWLGAQVLSKKLANSQFDVRMVLLGRE
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA