| Definition | Chlamydia muridarum Nigg, complete genome. |
|---|---|
| Accession | NC_002620 |
| Length | 1,072,950 |
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Identifier: 15834628
GI number: 15834628
Start: 2719
End: 3150
Strand: Reverse
Name: Not Available
Synonym: TC0003
Alternate gene names: NA
Gene position: 3150-2719 (Counterclockwise)
Preceding gene: 15834632
Following gene: 15834627
Centisome position: 0.29
GC content: 37.96
Gene sequence:
>432_bases ATGAAAAATAATTCCGCTCAAAAAATTATCGATTCTATAAAACAAATTCTTTCTATTTATAAAATAGATTTCGATCCTTC CTTCGGCGCTGTTCTTACAGATGACAACGATCTGGACTACCAGATGCTCATCGAGAAAACCCAAGAAAAAATCCAAGAGC TCGACAAACGTTCTCAAGAAATCCTTCAACAAACTGGTATGACTCGCGAGCAAATGGAAGTTTTTGCTAACAATCCTGAT AACTTTTCTCCTGAAGAGTGGCGAGCTCTAGAAACCATCCGATCCTCTTGCAATGAATACAAGAAAGAGACCGAAGAGCT TATAAAAGAAGTCACCCAAGACATCAGCCATACCTCAGGAAAATCTCCCACTCCCAAAGCAAAATCTAGCTCTCCGAAAA AAAGTAAGAAAAAAAATTGGATTCCCTTATAA
Upstream 100 bases:
>100_bases TAGTCCGGAAATATACGCTGAACAATAAAAAAGAGCAATATTACGTCACAAAAAAAACAAGAAAAATTTTATTATTAAAT AAAACATCAGGTTTTTTGTT
Downstream 100 bases:
>100_bases AAACTTCTATAATCCCGAGACATGAAGATAATAGTTTCTCGTGGATTAGATCTGTCTTTAAAAGGAGCCCCTAAGGAATC GGGTTTTTGCGGAAAAGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 143; Mature: 143
Protein sequence:
>143_residues MKNNSAQKIIDSIKQILSIYKIDFDPSFGAVLTDDNDLDYQMLIEKTQEKIQELDKRSQEILQQTGMTREQMEVFANNPD NFSPEEWRALETIRSSCNEYKKETEELIKEVTQDISHTSGKSPTPKAKSSSPKKSKKKNWIPL
Sequences:
>Translated_143_residues MKNNSAQKIIDSIKQILSIYKIDFDPSFGAVLTDDNDLDYQMLIEKTQEKIQELDKRSQEILQQTGMTREQMEVFANNPD NFSPEEWRALETIRSSCNEYKKETEELIKEVTQDISHTSGKSPTPKAKSSSPKKSKKKNWIPL >Mature_143_residues MKNNSAQKIIDSIKQILSIYKIDFDPSFGAVLTDDNDLDYQMLIEKTQEKIQELDKRSQEILQQTGMTREQMEVFANNPD NFSPEEWRALETIRSSCNEYKKETEELIKEVTQDISHTSGKSPTPKAKSSSPKKSKKKNWIPL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chlamydial CPn_0742/CT_635/TC_0003 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16528; Mature: 16528
Theoretical pI: Translated: 5.37; Mature: 5.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNNSAQKIIDSIKQILSIYKIDFDPSFGAVLTDDNDLDYQMLIEKTQEKIQELDKRSQE CCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH ILQQTGMTREQMEVFANNPDNFSPEEWRALETIRSSCNEYKKETEELIKEVTQDISHTSG HHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC KSPTPKAKSSSPKKSKKKNWIPL CCCCCCCCCCCCCCHHCCCCCCC >Mature Secondary Structure MKNNSAQKIIDSIKQILSIYKIDFDPSFGAVLTDDNDLDYQMLIEKTQEKIQELDKRSQE CCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH ILQQTGMTREQMEVFANNPDNFSPEEWRALETIRSSCNEYKKETEELIKEVTQDISHTSG HHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC KSPTPKAKSSSPKKSKKKNWIPL CCCCCCCCCCCCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9784136 [H]