Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 16120291

GI number: 16120291

Start: 315786

End: 316931

Strand: Reverse

Name: Not Available

Synonym: VNG6406H

Alternate gene names: NA

Gene position: 316931-315786 (Counterclockwise)

Preceding gene: 16120292

Following gene: 16120290

Centisome position: 86.73

GC content: 66.67

Gene sequence:

>1146_bases
ATGTCAGATGAACGTATCCGGACAGTCGTTGCGACACTCGTCGAGCCAACGGCGCACAAGGAGCAGAAGCTTCGCCGTCT
CCAGTCGACCTACCGCGAGGCTTTCGAAGCCGCCGTCGAGGCCGGCGCGACGACGATGACGGCGGTCAACGATATCGTGA
CGCCGTACGACCTCCCGTATCAGGCGAAGGACGCGCTGAAGCGCCACGTTCCGCAGCTTCTTGAGGATGGCACACCGGAT
CTTAACGCGGCACAGCCGGTCCGGTTCACCAACCGTGCCGCCACGTTCGACCGCTCGGCGGAGCGTACCCACGAGTTCTG
CTGGGAAGTGCCCCAGCCGGGCCGCGGGACGAACGTTTGGATCCCGCTCGCAATCAACCCGGCCCAGCGGAATTGGTGGG
ACCAGCTGCTCGCCGGCGACGCCACCGCGGGACAGTTGCAGCTCGTCCATCAACCCCGACACGACCGCTGGGAGCTCCAC
GTCCCGCTGACGCTCCCGACACCTGACACAGATATTGACTCCAAATCCTGCACACCGGTCGGGTTCGACGTCGGCGAGGC
GATCCTGCTGACCGGCTGCGCACTCCGGAACGGCCGTCCAGTCGACCCGTTACTGGTCGACGGCGGGCGGGCCCGTGACC
TCCATCAGACGCTGCGAACGACACTCCAGCGGCTGCAGGAACGCGACGCCGCCGCGTGGCGGATCGACGAGCGAGCCGCA
TATTTCCGGAACGCGCTCGGCGACGAGATTGAGACGGCCACCCGCCGGGCTGTCGACTACGCCGCCGGCTTCGAGCAACC
GGTGATCGTCCTGGAGGCCCTTGAGTCGCTCCAGGAGGACCTCGACGTCGGGCCGCATCTCAGCCGGCGGCTCCACGCGT
GGGCGTTCGACCGGCTACAGACGCGACTCGCGGACAAGGCCGCCGACGCCGGGATTCCTGTCCAGTACGTCGACCCAGCG
TACACGTCCCAGATCTGCCACGCCTGCGGGCACATCGGCACCCGTCCCGAACAGGCGGAGTTCCGCTGTCCAAACGACGA
CTGTTGGGTGTCGGTCTATCAGGCCGATATCAACGCGGCGGCCAATATCGCCGGCCGCCTCGATCCGTGGGGTGAGAGCT
GTCCCTGGAAAACCGGCCAGCGATGA

Upstream 100 bases:

>100_bases
TCGGGCTCCTCCGAGACTACGCGGACGACATCGAACACCTCGGCTACGTGCCCCGAATGTGGGGCGAGTCCGACCACTGA
TTCACTAGCTCTTCAGTTCC

Downstream 100 bases:

>100_bases
CACGCCACGGAGCGGGCGCACCCGTGACAGTGCCACAGGACCTCGAGAGTAGAGCCGATCACAGCGATGACGCTCACGAG
TGCAGTCCTGAAACCTCAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 381; Mature: 380

Protein sequence:

>381_residues
MSDERIRTVVATLVEPTAHKEQKLRRLQSTYREAFEAAVEAGATTMTAVNDIVTPYDLPYQAKDALKRHVPQLLEDGTPD
LNAAQPVRFTNRAATFDRSAERTHEFCWEVPQPGRGTNVWIPLAINPAQRNWWDQLLAGDATAGQLQLVHQPRHDRWELH
VPLTLPTPDTDIDSKSCTPVGFDVGEAILLTGCALRNGRPVDPLLVDGGRARDLHQTLRTTLQRLQERDAAAWRIDERAA
YFRNALGDEIETATRRAVDYAAGFEQPVIVLEALESLQEDLDVGPHLSRRLHAWAFDRLQTRLADKAADAGIPVQYVDPA
YTSQICHACGHIGTRPEQAEFRCPNDDCWVSVYQADINAAANIAGRLDPWGESCPWKTGQR

Sequences:

>Translated_381_residues
MSDERIRTVVATLVEPTAHKEQKLRRLQSTYREAFEAAVEAGATTMTAVNDIVTPYDLPYQAKDALKRHVPQLLEDGTPD
LNAAQPVRFTNRAATFDRSAERTHEFCWEVPQPGRGTNVWIPLAINPAQRNWWDQLLAGDATAGQLQLVHQPRHDRWELH
VPLTLPTPDTDIDSKSCTPVGFDVGEAILLTGCALRNGRPVDPLLVDGGRARDLHQTLRTTLQRLQERDAAAWRIDERAA
YFRNALGDEIETATRRAVDYAAGFEQPVIVLEALESLQEDLDVGPHLSRRLHAWAFDRLQTRLADKAADAGIPVQYVDPA
YTSQICHACGHIGTRPEQAEFRCPNDDCWVSVYQADINAAANIAGRLDPWGESCPWKTGQR
>Mature_380_residues
SDERIRTVVATLVEPTAHKEQKLRRLQSTYREAFEAAVEAGATTMTAVNDIVTPYDLPYQAKDALKRHVPQLLEDGTPDL
NAAQPVRFTNRAATFDRSAERTHEFCWEVPQPGRGTNVWIPLAINPAQRNWWDQLLAGDATAGQLQLVHQPRHDRWELHV
PLTLPTPDTDIDSKSCTPVGFDVGEAILLTGCALRNGRPVDPLLVDGGRARDLHQTLRTTLQRLQERDAAAWRIDERAAY
FRNALGDEIETATRRAVDYAAGFEQPVIVLEALESLQEDLDVGPHLSRRLHAWAFDRLQTRLADKAADAGIPVQYVDPAY
TSQICHACGHIGTRPEQAEFRCPNDDCWVSVYQADINAAANIAGRLDPWGESCPWKTGQR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42589; Mature: 42458

Theoretical pI: Translated: 5.29; Mature: 5.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDERIRTVVATLVEPTAHKEQKLRRLQSTYREAFEAAVEAGATTMTAVNDIVTPYDLPY
CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCH
QAKDALKRHVPQLLEDGTPDLNAAQPVRFTNRAATFDRSAERTHEFCWEVPQPGRGTNVW
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCHHHHHHHHHHHCCCCCCCCCEEE
IPLAINPAQRNWWDQLLAGDATAGQLQLVHQPRHDRWELHVPLTLPTPDTDIDSKSCTPV
EEEEECHHHHHHHHHHHCCCCCCCCEEEEECCCCCCEEEEEEEEECCCCCCCCCCCCCCC
GFDVGEAILLTGCALRNGRPVDPLLVDGGRARDLHQTLRTTLQRLQERDAAAWRIDERAA
CCCHHHHHHHHHHHCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
YFRNALGDEIETATRRAVDYAAGFEQPVIVLEALESLQEDLDVGPHLSRRLHAWAFDRLQ
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
TRLADKAADAGIPVQYVDPAYTSQICHACGHIGTRPEQAEFRCPNDDCWVSVYQADINAA
HHHHHHHHCCCCCEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEHHHHHH
ANIAGRLDPWGESCPWKTGQR
HHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SDERIRTVVATLVEPTAHKEQKLRRLQSTYREAFEAAVEAGATTMTAVNDIVTPYDLPY
CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCH
QAKDALKRHVPQLLEDGTPDLNAAQPVRFTNRAATFDRSAERTHEFCWEVPQPGRGTNVW
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCHHHHHHHHHHHCCCCCCCCCEEE
IPLAINPAQRNWWDQLLAGDATAGQLQLVHQPRHDRWELHVPLTLPTPDTDIDSKSCTPV
EEEEECHHHHHHHHHHHCCCCCCCCEEEEECCCCCCEEEEEEEEECCCCCCCCCCCCCCC
GFDVGEAILLTGCALRNGRPVDPLLVDGGRARDLHQTLRTTLQRLQERDAAAWRIDERAA
CCCHHHHHHHHHHHCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
YFRNALGDEIETATRRAVDYAAGFEQPVIVLEALESLQEDLDVGPHLSRRLHAWAFDRLQ
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
TRLADKAADAGIPVQYVDPAYTSQICHACGHIGTRPEQAEFRCPNDDCWVSVYQADINAA
HHHHHHHHCCCCCEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEHHHHHH
ANIAGRLDPWGESCPWKTGQR
HHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA