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Identifier: 16120289

GI number: 16120289

Start: 314185

End: 315084

Strand: Reverse

Name: Not Available

Synonym: VNG6403H

Alternate gene names: NA

Gene position: 315084-314185 (Counterclockwise)

Preceding gene: 16120290

Following gene: 16120288

Centisome position: 86.22

GC content: 64.78

Gene sequence:

>900_bases
ATGTCAAGTAACAACGTCACGACGGATGTAGTTTCGGTCGATGAACAGGCATTCGAGAACGCGGGCGGTCAGGCGGTCGA
TGAGGACGGCTTCCCGGTCGTCGACGAGACGCCGGCGTTCGAGGCGGAGGTCGAGCAGGAGACGCAGGCGAAGGTGGATG
CGAATCACCCAGATGGGATCGCGGATACGAGCGAGGATCGGATTCACGGTGTCACCCTCGAACAAGAGGAGCGTATTCGG
GCGCGGGAAGCCGAACTGGAGCGCATCAGTGCCCAAGCCGAGCTGGGCACGCAGGACGGTCGTGAGCAGCGCACGCGGGC
GGTCGCCGCTGAAGGGAGCACGGAGCGCCGGCGGGAGTTCCAGCAGCGGGCGGCGAGCGTGGAGCCGATGGCCGACCCCG
AACGGGATGATCCCCGAGCGGAGCTCTCCCAGGATGAACTGGCGACGGTGAACACGGAGGCAGATCGACTCGCGACGCGG
CTGGATGGCTGGTCGCGGGCGGCGATCAGTCGCCGGCTGGCCGAAGCGATCGTCGACGGCCGAGACCTGACGAGTGCGGT
CGTGCGGGTGTTCGAGGAGTTGCAGACGGCCCCGGGGGGCACCGTGCCAATCGACGCTCTGGAGGACATCGATCGCAAGG
AGGTGAGTGTTGAAGGTCGTGTGACGCAGCTGTGGGAGCCATCCAGTCCGAGCATCGCTCAGGTCGGTCTCATCGAGGAC
GAAAGTGGTCGTACGAAGCTGACGAGTTGGAAAGCATCGGATGCCCCGTGGATTGAGGAAGGCGAGCGAGTTCGCATTCA
CGGGGCTGCGAAGAACTGGTACAACGGGCGTGTCTCAGTAGCCGTCACTGGGTGGTCGACCCTGCATTTCCCTGAGCGCG
GTCGGTGGTGGGACGAATAG

Upstream 100 bases:

>100_bases
ACAGACGGTTCTGTCGGTCGTCGTCCGTTGAAGAAATCCGCGATGTAGGAGCATCGCGGAGTCGGCGCGTGAGCGCCTTC
AGGAACTGGTCTAAGTTCCA

Downstream 100 bases:

>100_bases
CCAGTCGGCGCAGCCTTCTTTTTTTGCTGTGTGCCGGACCGGTCCAGCCCCCACCGCCCCACCCTCCGCTCCGTGCTCGC
TCCTGTCGTCGCTGCGCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 299; Mature: 298

Protein sequence:

>299_residues
MSSNNVTTDVVSVDEQAFENAGGQAVDEDGFPVVDETPAFEAEVEQETQAKVDANHPDGIADTSEDRIHGVTLEQEERIR
AREAELERISAQAELGTQDGREQRTRAVAAEGSTERRREFQQRAASVEPMADPERDDPRAELSQDELATVNTEADRLATR
LDGWSRAAISRRLAEAIVDGRDLTSAVVRVFEELQTAPGGTVPIDALEDIDRKEVSVEGRVTQLWEPSSPSIAQVGLIED
ESGRTKLTSWKASDAPWIEEGERVRIHGAAKNWYNGRVSVAVTGWSTLHFPERGRWWDE

Sequences:

>Translated_299_residues
MSSNNVTTDVVSVDEQAFENAGGQAVDEDGFPVVDETPAFEAEVEQETQAKVDANHPDGIADTSEDRIHGVTLEQEERIR
AREAELERISAQAELGTQDGREQRTRAVAAEGSTERRREFQQRAASVEPMADPERDDPRAELSQDELATVNTEADRLATR
LDGWSRAAISRRLAEAIVDGRDLTSAVVRVFEELQTAPGGTVPIDALEDIDRKEVSVEGRVTQLWEPSSPSIAQVGLIED
ESGRTKLTSWKASDAPWIEEGERVRIHGAAKNWYNGRVSVAVTGWSTLHFPERGRWWDE
>Mature_298_residues
SSNNVTTDVVSVDEQAFENAGGQAVDEDGFPVVDETPAFEAEVEQETQAKVDANHPDGIADTSEDRIHGVTLEQEERIRA
REAELERISAQAELGTQDGREQRTRAVAAEGSTERRREFQQRAASVEPMADPERDDPRAELSQDELATVNTEADRLATRL
DGWSRAAISRRLAEAIVDGRDLTSAVVRVFEELQTAPGGTVPIDALEDIDRKEVSVEGRVTQLWEPSSPSIAQVGLIEDE
SGRTKLTSWKASDAPWIEEGERVRIHGAAKNWYNGRVSVAVTGWSTLHFPERGRWWDE

Specific function: Unknown

COG id: COG1599

COG function: function code L; Single-stranded DNA-binding replication protein A (RPA), large (70 kD) subunit and related ssDNA-binding proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33116; Mature: 32985

Theoretical pI: Translated: 4.21; Mature: 4.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSNNVTTDVVSVDEQAFENAGGQAVDEDGFPVVDETPAFEAEVEQETQAKVDANHPDGI
CCCCCCEEHEECCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCC
ADTSEDRIHGVTLEQEERIRAREAELERISAQAELGTQDGREQRTRAVAAEGSTERRREF
CCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHH
QQRAASVEPMADPERDDPRAELSQDELATVNTEADRLATRLDGWSRAAISRRLAEAIVDG
HHHHCCCCCCCCCCCCCCHHHCCCCHHEECCCHHHHHHHHHCCHHHHHHHHHHHHHHHCC
RDLTSAVVRVFEELQTAPGGTVPIDALEDIDRKEVSVEGRVTQLWEPSSPSIAQVGLIED
CHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCHHHEECCCCEEEEECCCCCCEEEEEEEEC
ESGRTKLTSWKASDAPWIEEGERVRIHGAAKNWYNGRVSVAVTGWSTLHFPERGRWWDE
CCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEECCEEECCCCCCCCCCC
>Mature Secondary Structure 
SSNNVTTDVVSVDEQAFENAGGQAVDEDGFPVVDETPAFEAEVEQETQAKVDANHPDGI
CCCCCEEHEECCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCC
ADTSEDRIHGVTLEQEERIRAREAELERISAQAELGTQDGREQRTRAVAAEGSTERRREF
CCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHH
QQRAASVEPMADPERDDPRAELSQDELATVNTEADRLATRLDGWSRAAISRRLAEAIVDG
HHHHCCCCCCCCCCCCCCHHHCCCCHHEECCCHHHHHHHHHCCHHHHHHHHHHHHHHHCC
RDLTSAVVRVFEELQTAPGGTVPIDALEDIDRKEVSVEGRVTQLWEPSSPSIAQVGLIED
CHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCHHHEECCCCEEEEECCCCCCEEEEEEEEC
ESGRTKLTSWKASDAPWIEEGERVRIHGAAKNWYNGRVSVAVTGWSTLHFPERGRWWDE
CCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEECCEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA